prot_E-siliculosus-1a_M_contig71.15301.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig71.15301.1
Unique Nameprot_E-siliculosus-1a_M_contig71.15301.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length403
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig71.15301.1 vs. uniprot
Match: D7FSU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU6_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 8.810e-83
Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 0 
Query:  112 QVDMTERSSKSWGLVAADHQVVTSDDGGGAGEGDGNDVVMIKAPRAGARALRVERSRVAKSTAYQGIAMEAWAAAEPKATALANLCTAEAHKAYRKEVQEAGGLWTHDEVSAAREAATQLRSLDECYHRREKCCIEVPQGKKLHHLVDFCRRFRRIPR 269
            QVDMTERSSKSWGLVAADHQVVT D GGG G GDG+D VMIKAPR GARALRVERSRVA STAYQG+AMEAWAAAEPKA AL NL TA +H+AYR+EV+EAGGLWT DEVSAA EAATQLRSLD+CYHRREKCCI+VP GKK HHLVDFCRRF+RIPR
Sbjct:  164 QVDMTERSSKSWGLVAADHQVVTIDGGGGTGAGDGDDKVMIKAPRTGARALRVERSRVANSTAYQGMAMEAWAAAEPKANALTNLSTAASHEAYREEVREAGGLWTPDEVSAALEAATQLRSLDDCYHRREKCCIKVPDGKKNHHLVDFCRRFKRIPR 321
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig71.15301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSU6_ECTSI8.810e-8384.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig71contigE-siliculosus-1a_M_contig71:546319..559037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig71.15301.1mRNA_E-siliculosus-1a_M_contig71.15301.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig71 532920..559637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig71.15301.1 ID=prot_E-siliculosus-1a_M_contig71.15301.1|Name=mRNA_E-siliculosus-1a_M_contig71.15301.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=403bp
MGSCPRLVPMVVPAPSPPTKKQATAAVLSPPAPPPVTLAHLVWSRATTTQ
APGSKTKEGSRILSGFRSSRGRRGNRTSPLLTWMTSSGKPKERLPSSRAW
LSLSCRSPPPEQVDMTERSSKSWGLVAADHQVVTSDDGGGAGEGDGNDVV
MIKAPRAGARALRVERSRVAKSTAYQGIAMEAWAAAEPKATALANLCTAE
AHKAYRKEVQEAGGLWTHDEVSAAREAATQLRSLDECYHRREKCCIEVPQ
GKKLHHLVDFCRRFRRIPREESVKIKWQKTRGVHRGLEDRGHCGGQASIA
CSPMPKSPAMGLRRRSPHPQHWDLAQQSTTTCRSGLRGPSPAHHRGVLRG
LITRAPRRMDFLVPGGCEMRQEKIRLNESSTKAGGRGAAPPAGRSSDRCS
DR*
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