prot_E-siliculosus-1a_M_contig70.15236.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig70.15236.1
Unique Nameprot_E-siliculosus-1a_M_contig70.15236.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length86
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig70.15236.1 vs. uniprot
Match: D7G867_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G867_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.380e-21
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 0 
Query:    1 MCPLKEQTTRLAESDVHMLEKDPS-------GQGLE-----HGHCLVKRYQRSAAGVDIGHSDLMRTPLWLARTVDHLVVECMDKGAHGGGDPNLAFD 86
            MCP +E + R+   D+H+LEK+         G G       H   +VKR+QR+AAG+DI   +L+RTPLWLARTVDHLV+ CMDKG HGGGDP L +D
Sbjct:  261 MCPPEEMSRRVP-GDLHILEKEHPDFFMPDLGDGGPPRLWLHDDLVVKRHQRAAAGMDISKPELLRTPLWLARTVDHLVMICMDKGPHGGGDPALVWD 357
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig70.15236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G867_ECTSI1.380e-2152.04PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005062SAC3/GANP/THP3PFAMPF03399SAC3_GANPcoord: 1..73
e-value: 2.7E-14
score: 53.2
NoneNo IPR availablePANTHERPTHR12436:SF31SAC3 DOMAIN-CONTAINING PROTEIN 1coord: 1..72
NoneNo IPR availablePANTHERPTHR1243680 KDA MCM3-ASSOCIATED PROTEINcoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig70contigE-siliculosus-1a_M_contig70:503322..503579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig70.15236.1mRNA_E-siliculosus-1a_M_contig70.15236.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig70 503322..503579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig70.15236.1 ID=prot_E-siliculosus-1a_M_contig70.15236.1|Name=mRNA_E-siliculosus-1a_M_contig70.15236.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=86bp
MCPLKEQTTRLAESDVHMLEKDPSGQGLEHGHCLVKRYQRSAAGVDIGHS
DLMRTPLWLARTVDHLVVECMDKGAHGGGDPNLAFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005062SAC3/GANP/THP3