prot_E-siliculosus-1a_M_contig7.15188.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15188.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15188.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length337
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15188.1 vs. uniprot
Match: D8LSN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN9_ECTSI)

HSP 1 Score: 499 bits (1284), Expect = 6.850e-176
Identity = 290/336 (86.31%), Postives = 290/336 (86.31%), Query Frame = 0 
Query:    1 MRFSPCWHAATISLLQTCSAGEGCHVHHARDAPPLATPTGASSPLPLMAYAFSPSTRRASHSAXXXXXXXXXXXSKPPLGHRHRSAMQRTTRMSEAARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDPDWTLSRVPNPVGALLYAAEPEERAAEEMAAFGEGAAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDPVGDNAAGAXXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSACAGAGKTLVVTVRSVGQLHEAAMAAFAASQTTVLGAGGTGAVEGSTTPPPMALLIEPMPELWEAGLLYL 336
            MRFSPCWHAATISLLQTCSAGEG HVHHARD PPLATPTGAS PLPLMAYAFSPSTRRA H A           SKP LGHRHRSA QRTTRMSEAARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPED DWTLSRVPNPVGALLYAAEPEERAAEEM A GE AAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDPVGDNAAG XXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSACAGAGKTLVVT                   TTVLG GGTGA E  TTPPPMALLIEPMPELWEAGLLYL
Sbjct:    1 MRFSPCWHAATISLLQTCSAGEGRHVHHARDPPPLATPTGASPPLPLMAYAFSPSTRRALHPATTTTSSRRSSASKPRLGHRHRSATQRTTRMSEAARPGADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDTDWTLSRVPNPVGALLYAAEPEERAAEEMVALGETAAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDPVGDNAAGXXXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSACAGAGKTLVVT-------------------TTVLGVGGTGAAEDGTTPPPMALLIEPMPELWEAGLLYL 317
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN9_ECTSI6.850e-17686.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..336
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.548

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:2041771..2042781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15188.1mRNA_E-siliculosus-1a_M_contig7.15188.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 2041406..2042810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15188.1 ID=prot_E-siliculosus-1a_M_contig7.15188.1|Name=mRNA_E-siliculosus-1a_M_contig7.15188.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=337bp
MRFSPCWHAATISLLQTCSAGEGCHVHHARDAPPLATPTGASSPLPLMAY
AFSPSTRRASHSATTTTSSRRSSASKPPLGHRHRSAMQRTTRMSEAARPG
ADSGVALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDPDWTLSRV
PNPVGALLYAAEPEERAAEEMAAFGEGAAALPCFRLGGTDGTAVVVDVSS
GHVVGVRVDPVGDNAAGAAAGSSAAMGIVAAAQQRRDGGGLVFLPGVRPS
VWESGDMGTVLRIASSACAGAGKTLVVTVRSVGQLHEAAMAAFAASQTTV
LGAGGTGAVEGSTTPPPMALLIEPMPELWEAGLLYL*
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