prot_E-siliculosus-1a_M_contig7.15186.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15186.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15186.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length282
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15186.1 vs. uniprot
Match: A0A6H5JRS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS7_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 4.770e-101
Identity = 175/233 (75.11%), Postives = 180/233 (77.25%), Query Frame = 0
Query:   26 MVMELQRXXXXXXXPRWLVATLFATATASAASPTAILAESVAPRARAGPVRGPRGLASGSGRRNSNTGSNTVNSASSEEYVCPGETAYIANGACDDMNNNPYCGYDGGDCCSCXXXXXXXXXXAGASPPSYFNCVDPAAACVGEEDXXXXXXXXXXXXXXXXXXXXXXXASDESSASRLSHCVEQWIGDGACDHVNNSAECSYDGGDCCSEDGDFSECLDPDAPAATPSPYSE 258
            MVMELQR       PRWL+ TL ATATASA SPTAILAESVAPR RAGPVRGPR LAS +GR      S T NSASSEEYVCPGETAYIANGACDDMNNN YCGYDGGDCCSC  XXXXXXXX  ASPPSYFNCVDPAAACVGEE+                       ASDESSASRLS CVEQWIGDGACD +NNSAECSYDGGDCCSEDGD+SECLDPDA AAT SPYSE
Sbjct:    1 MVMELQRKRRRQNPPRWLITTLLATATASATSPTAILAESVAPRVRAGPVRGPRQLASANGRY-----STTGNSASSEEYVCPGETAYIANGACDDMNNNVYCGYDGGDCCSCTAXXXXXXXXXXASPPSYFNCVDPAAACVGEENEDGGSDVADDAQQRYSSSGRAASASDESSASRLSDCVEQWIGDGACDDMNNSAECSYDGGDCCSEDGDYSECLDPDALAATSSPYSE 228          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15186.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 8.620e-15
Identity = 53/161 (32.92%), Postives = 67/161 (41.61%), Query Frame = 0
Query:  106 VCPGETAYIANGACDDMNNNPYCGYDGGDCCSCXXXXXXXXXXAGASPPSYFNCVDPAAACVGEEDXXXXXXXXXXXXXXXXXXXXXXXASDESSASRLSHCVEQWIGDGACDHVNNSAECSYDGGDCCS-----------EDGDFSE------CLDPDAP 249
             C G   ++A+G CD +NNN  CGYDGGDCC C                  F C+DP+A C  ++D                            +   + +C  + IGDG CD  NN  EC YDGGDCCS           +DG          C+DPDAP
Sbjct:  176 TCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFYECGIRG-----FACIDPSAECADDDDV---------------------------TVDTVENCGVRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAP 304          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15186.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 9.440e-7
Identity = 57/181 (31.49%), Postives = 74/181 (40.88%), Query Frame = 0
Query:  102 SEEYV-CPGETAYIANGACDDMNNNPYCGYDGGDCCSCXXXXXXXXXXA---GASPPSYFNCVDPAAACVGEEDXXXXXXXXXXXXXXXXXXXXXXXASDESSASRLSHCVE---QWIGDGACDHVNNSAECSYDGGDCC-------------SEDGDFS-ECLDPDAPAA------TPSP 255
            S EY+ C G T +I +G CD   NN  CG+DGGDCC+C          A   G     Y +C+DP                                    ++A     C E   +W  DG CD   N+AEC YDGGDCC             +  G +  +C+DPDAP++      TPSP
Sbjct:   61 SPEYLGCLGYTNHIKDGYCDTDLNNAECGWDGGDCCACTCGSDSDEELAHPCGQLGDGY-DCLDPDVP------------------------DDCGVTPSPAAAIGYPDCEEYLYEWQ-DGVCDDNLNTAECGYDGGDCCRCTCRDYNSWGYYTNCGYYGYDCMDPDAPSSCSTDSPTPSP 215          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15186.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.850e-6
Identity = 49/154 (31.82%), Postives = 61/154 (39.61%), Query Frame = 0
Query:  110 ETAYIANGACDDMNNNPYCGYDGGDCCSCXXXXXXXXXXAGASPPSY------FNCVDPAAACVGEEDXXXXXXXXXXXXXXXXXXXXXXXASDESSASRLSHCVEQW--IGDGACDHVNNSAECSYDGGDCC--SEDG-----DFSECLDPDA 248
            E ++  +  CD++NNNP C YDGGDCC C          A +S   Y      FNC D    C+                             D S  +    C   +  +GDG+C   NN+  C YDGGDCC  S  G        ECLDP A
Sbjct:   61 EESWKGDSWCDEINNNPSCDYDGGDCCECSC--------ASSSSAEYSCGENGFNCRD--TTCL-----------------------------DLSLVAEFPDCTGDYLTVGDGSCSEANNNDLCGYDGGDCCVCSCQGVNCMTTSFECLDPSA 175          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15186.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.930e-6
Identity = 52/181 (28.73%), Postives = 71/181 (39.23%), Query Frame = 0
Query:  100 ASSEEYV-CPGETAYIANGACDDMNNNPYCGYDGGDCCSCXXXXXXXXXXAGASPPSYFNCVDPAAACVGEEDXXXXXXXXXXXXXXXXXXXXXXXASDESSASRLSHCVEQ----WIGDGACDHVNNSAECSYDGGDCC-------------SEDGDFS-ECLDPDAPAA------TPSP 255
            AS + Y  C G   +I +G CD+ NN   CG+DGGDCC+C                  ++C DP                                  ++ + +  + C       W  DG CD   N+AEC YDGGDCC             S  G +  +CLDP+AP++      TPSP
Sbjct:  154 ASDDPYPGCGGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGMDAEVDHECGLLNDGYDCRDP-------------------------------DVPEDCNLANFAQCEGMNGYDWQ-DGYCDDDLNTAECGYDGGDCCRCTCRDYDSWGYYSSCGYYGYDCLDPEAPSSCSTDSPTPSP 302          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JRS7_9PHAE4.770e-10175.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT4_9PHAE8.620e-1532.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX77_ECTSI9.440e-731.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z1_9PHAE1.850e-631.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVP4_9PHAE1.930e-628.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 256..282
NoneNo IPR availableGENE3D3.30.300.240coord: 199..277
e-value: 3.3E-6
score: 29.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 43..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 55..63
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
IPR000800Notch domainSMARTSM00004NL_2coord: 195..234
e-value: 0.0023
score: 22.0
coord: 100..136
e-value: 0.0071
score: 18.1
IPR000800Notch domainPFAMPF00066Notchcoord: 205..233
e-value: 2.7E-5
score: 24.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:2021124..2024544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15186.1mRNA_E-siliculosus-1a_M_contig7.15186.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 2021124..2024671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15186.1 ID=prot_E-siliculosus-1a_M_contig7.15186.1|Name=mRNA_E-siliculosus-1a_M_contig7.15186.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=282bp
MTPAQHHRRNTKSQQWIKSQDFSSKMVMELQRRRRRRRRPRWLVATLFAT
ATASAASPTAILAESVAPRARAGPVRGPRGLASGSGRRNSNTGSNTVNSA
SSEEYVCPGETAYIANGACDDMNNNPYCGYDGGDCCSCTATAASGSGSAG
ASPPSYFNCVDPAAACVGEEDEDGGSDVADDAQQRYSSSGRAASASDESS
ASRLSHCVEQWIGDGACDHVNNSAECSYDGGDCCSEDGDFSECLDPDAPA
ATPSPYSEEEEEEEQQEEDEEQEQEEQEQEEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom