prot_E-siliculosus-1a_M_contig7.15183.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15183.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15183.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length743
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A6H5JME9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME9_9PHAE)

HSP 1 Score: 550 bits (1417), Expect = 1.520e-187
Identity = 382/459 (83.22%), Postives = 388/459 (84.53%), Query Frame = 0
Query:  292 MAEAWHVVVPIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGIVRVVLAALAWCARLCTFPPGTVCCLCVLGCCWRCLNFSKDGPRCNGSTATRLLAGLNCAGGGGXXXXXXXXXXXXXXXXXXEPPPPPQRSRFTAAIFFLDAVLWALVGARARCSPFWRGMGLSLDLSPGQEEGGDGGSGGGKAAGDFGAVVDSWVSCHPFSWLGNCVFGRVRPSDSDCARRGCCCAGRQNLAEGTRNNGSNIAATSDSDNKNTATTGPTINGSXXXXXXXXDPAISTERRRR----ARVMVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELRYYVKGASAVLEPVPVVLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSLSSC----SISDGRSLETASERVASEC 742
            MAEAWHVVVPIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGIVR+VLAALAWCARLCTFPPGT+CCLCVLGCCWRCLNFS DGPRCNGSTATRLLAGLNCAGGGG XXXXXXXXXXXXXXX        QR+RF A IFFLDAVLWALVGARARCSPFWRGMGLSLDLSPGQE GGD GSGG +AAGDFGAV+DSWVSCHPFSWLGNCVFGRVRPSDS CARRGCCCAGR+NLAEGTR                           XXXXXXXX               ARVMVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELRYYVKGASAVLE VPVVLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           SISDGRSLETASERVA EC
Sbjct:    1 MAEAWHVVVPIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGIVRIVLAALAWCARLCTFPPGTLCCLCVLGCCWRCLNFSMDGPRCNGSTATRLLAGLNCAGGGGGXXXXXXXXXXXXXXXEPXXXXXXQRNRFAAPIFFLDAVLWALVGARARCSPFWRGMGLSLDLSPGQE-GGDSGSGGEQAAGDFGAVIDSWVSCHPFSWLGNCVFGRVRPSDSGCARRGCCCAGRRNLAEGTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVMVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTELRYYVKGASAVLERVPVVLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRSLETASERVAREC 458          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: D8LSN5_ECTSI (Hypothetical leucine rich repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN5_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.520e-112
Identity = 215/227 (94.71%), Postives = 216/227 (95.15%), Query Frame = 0
Query:  158 LSDNKHLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSIFSVDGNEGVTPADSRAPSADPPFAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDSANKPRVAKVLDSMAEAWHVVVPIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGIVRVVLAALAWCARLCTFPPGTVCCLCV 384
            LSDNK+LLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSIFSVDGNE VTPADSRAPSADPPFAGA XXXXXXXXXXXXXXXXXXXXXXXXX       R  ANKPRVAKVLDSMAEAWHVVVPIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGIVRVVLAALAWCARLCTFPPGTVCCLCV
Sbjct:  120 LSDNKYLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSIFSVDGNEAVTPADSRAPSADPPFAGAGXXXXXXXXXXXXXXXXXXXXXXXXX-------RARANKPRVAKVLDSMAEAWHVVVPIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLALMPLLGIVRVVLAALAWCARLCTFPPGTVCCLCV 339          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A6H5JMX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX8_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 4.980e-99
Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0
Query:    1 MSEAGTEIQESHGGDRDALLALYHATGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSDNKHLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSIFSVDGNEGVTPADSRAPSADPPFA 241
            MSEAGTEIQESH GDRDALLALYH TGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSDNKHLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSIFSVDGNEGVTPADSRAPSADPPFA
Sbjct:    1 MSEAGTEIQESHAGDRDALLALYHGTGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSDNKHLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSSRWEDATLEDDSKTIFSIFSVDGNEGVTPADSRAPSADPPFA 241          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A6B0WES6_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B0WES6_9CHLR)

HSP 1 Score: 97.8 bits (242), Expect = 3.520e-17
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    7 EIQESHGGDRDALLALYHATGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHL 84
            E     G DR+AL+ALYHATGGP+W N + W SD PL  WYGVTT+S GRVV LEL  N+L G +PA LG+L  L+ L
Sbjct:  357 EADGDAGTDREALVALYHATGGPNWRNDANWLSDEPLRRWYGVTTDSGGRVVRLELSSNDLSGELPAELGQLSELQWL 434          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A6L7WC15_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7WC15_9CHLR)

HSP 1 Score: 97.8 bits (242), Expect = 4.170e-17
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    7 EIQESHGGDRDALLALYHATGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHL 84
            E     G DR+AL+ALYHATGGP+W N + W SD PL  WYGVTT+S GRVV LEL  N+L G +PA LG+L  L+ L
Sbjct:  357 EADGDAGTDREALVALYHATGGPNWRNDANWLSDEPLRRWYGVTTDSGGRVVRLELSSNDLSGELPAELGQLSELQWL 434          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A6L8E604_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L8E604_9CHLR)

HSP 1 Score: 92.8 bits (229), Expect = 7.580e-16
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 0
Query:   15 DRDALLALYHATGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHL 84
            DR+AL+ALYHATGGP+W N + W SD PL  WYGV T+  GRVV LEL  N+L G +PA LG+L  L+ L
Sbjct:  280 DREALVALYHATGGPAWRNDANWLSDEPLRRWYGVATDPGGRVVRLELSSNDLSGELPAELGQLSELQWL 349          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A7X3R766_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3R766_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 1.240e-15
Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   18 ALLALYHATGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHL 84
            AL+ALY ATGG  W +RS WGS RP+ EWYGVT NS  RVV L L YNNL G IP  LG+L AL  L
Sbjct:   44 ALVALYDATGGEHWRDRSNWGSGRPIGEWYGVTVNSENRVVGLNLAYNNLAGEIPEALGQLTALREL 110          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A524RNG9_9CYAN (Uncharacterized protein (Fragment) n=1 Tax=Aphanocapsa feldmannii 277cV TaxID=2507553 RepID=A0A524RNG9_9CYAN)

HSP 1 Score: 86.3 bits (212), Expect = 2.850e-15
Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 0
Query:   15 DRDALLALYHATGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHL 84
            DRD L+  Y+AT G +W +R+ W S++P+++WYG+TT+S+GRV  L+L  N L GSIPA LG L  LE L
Sbjct:   93 DRDVLIEFYNATDGDNWKSRTNWKSNKPISQWYGITTDSSGRVTKLDLEENQLTGSIPAALGNLNNLEEL 162          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A6B0XLV3_9BACT (Fibronectin type-III domain-containing protein n=4 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A6B0XLV3_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 5.410e-15
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0
Query:   15 DRDALLALYHATGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGAL 81
            DR+AL+ALY AT GP+W N   W S+RP +EWYGVTTNSAGRV  LEL  N L+GS+PA +G+L  L
Sbjct:  970 DRNALIALYRATDGPNWTNNENWLSNRPPDEWYGVTTNSAGRVTWLELSDNGLKGSLPAAIGDLDGL 1036          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Match: A0A6L7YH52_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7YH52_9CHLR)

HSP 1 Score: 85.5 bits (210), Expect = 1.500e-14
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0
Query:   15 DRDALLALYHATGGPSWHNRSGWGSDRPLNEWYGVTTNSAGRVVALELRYNNLQGSIPAGLGELGALEHL 84
            DR AL+ALY ATGG  WH  + W SD P+ EW+GVTTNS GRV+ L+L  N L G IPA LG L  LE L
Sbjct:   94 DRAALVALYRATGGARWHTSTNWLSDTPIREWHGVTTNSDGRVMGLDLVGNQLSGPIPADLGNLTNLELL 163          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JME9_9PHAE1.520e-18783.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSN5_ECTSI1.520e-11294.71Hypothetical leucine rich repeat protein (Partial)... [more]
A0A6H5JMX8_9PHAE4.980e-9999.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6B0WES6_9CHLR3.520e-1758.97Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
A0A6L7WC15_9CHLR4.170e-1758.97Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A6L8E604_9CHLR7.580e-1660.00Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
A0A7X3R766_9BACT1.240e-1564.18Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
A0A524RNG9_9CYAN2.850e-1552.86Uncharacterized protein (Fragment) n=1 Tax=Aphanoc... [more]
A0A6B0XLV3_9BACT5.410e-1562.69Fibronectin type-III domain-containing protein n=4... [more]
A0A6L7YH52_9CHLR1.500e-1460.00Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 12..187
e-value: 1.2E-44
score: 154.5
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 98..175
NoneNo IPR availablePANTHERPTHR27008:SF246coord: 98..175
NoneNo IPR availablePANTHERPTHR27008:SF246coord: 56..161
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 56..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 630..648
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 309..333
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 649..742
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 469..601
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 449..468
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 334..339
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 368..448
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 625..629
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 602..624
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 340..367
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 14..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1995745..2005502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15183.1mRNA_E-siliculosus-1a_M_contig7.15183.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1995228..2006114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15183.1 ID=prot_E-siliculosus-1a_M_contig7.15183.1|Name=mRNA_E-siliculosus-1a_M_contig7.15183.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=743bp
MSEAGTEIQESHGGDRDALLALYHATGGPSWHNRSGWGSDRPLNEWYGVT
TNSAGRVVALELRYNNLQGSIPAGLGELGALEHLHLTNNELHGAIPPELG
RLHSLTDLRLYCNHLSGSIPPELGNLHALKKLVVYSNDLSGTVPPELEGL
RALEELLLSDNKHLLGDIPPGLDRNLALNRHTKQLPAGVLAGMFSPIGSS
RWEDATLEDDSKTIFSIFSVDGNEGVTPADSRAPSADPPFAGAGAGAAGA
GAAGAAGGGGATEKQRERQGGRRRRERDSANKPRVAKVLDSMAEAWHVVV
PIADDATSVWLLVKVAAARMGPLWWVSAAALSAAGLERAWLVLTLCAVLA
LMPLLGIVRVVLAALAWCARLCTFPPGTVCCLCVLGCCWRCLNFSKDGPR
CNGSTATRLLAGLNCAGGGGGSGGGSGSGDYNGDDNGDEPPPPPQRSRFT
AAIFFLDAVLWALVGARARCSPFWRGMGLSLDLSPGQEEGGDGGSGGGKA
AGDFGAVVDSWVSCHPFSWLGNCVFGRVRPSDSDCARRGCCCAGRQNLAE
GTRNNGSNIAATSDSDNKNTATTGPTINGSSSSNSEQEDPAISTERRRRA
RVMVRSVGETLVVDPLFLALSAVSRGGWDGSLAGIAGISAVFSALQLLTE
LRYYVKGASAVLEPVPVVLADDDDDDDEGGGGGRTLSRDEENQHSSVWSG
SDHSGSSSDDDSGGSSMSSLSSCSISDGRSLETASERVASEC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf