prot_E-siliculosus-1a_M_contig7.15144.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15144.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15144.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length127
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15144.1 vs. uniprot
Match: A0A6H5KBN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBN3_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 4.940e-15
Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = 0
Query:   20 VFALDAIVLAGGSMYSLVCLSHIAQMWGMRHEFQVAVRSPVLATLSGCSGVLMITVSIYRFTLEISPEASAVD----LVLAPMLLTAYTGVYVMRGFRLLVMYNPAMRGRFG 127
            + ALD ++++    ++L  LSHI+  W +R +F  +VRSP+LAT SG  GV++   ++ R  L + P+   V     ++  P++   + G YVMRG RLLVMYNPA R  +G
Sbjct:   25 IIALDVVLMSMLVGFTLTALSHISAAWRLRKDFFFSVRSPLLATTSGLVGVVLGAFAVAR--LIVIPDKLVVHSISLIIFVPLMELGFLGPYVMRGIRLLVMYNPATRTHWG 134          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15144.1 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 8.760e-14
Identity = 44/118 (37.29%), Postives = 72/118 (61.02%), Query Frame = 0
Query:   10 THRSPPSVIMVFALDAIVLAGGSMYSLVCLSHIAQMWGMRHEFQVAVRSPVLATLSGCSGVLMITVSIYRFTLEISPEASAVDLVLAPMLLTAYTGVYVMRGFRLLVMYNPAMRGRFG 127
            T  +P S + +F +D ++L+   ++SLV LS+ A M  +R EF +A+RSP+LA +SG  G+L+    I   TL     A    ++  P++L+ +T  Y++RG RLL+M+ P  R R+G
Sbjct:   61 TAFAPRSWLQLF-IDVVILSYTVVFSLVSLSYCAAMGQLRKEFFIALRSPMLAVMSGAIGILISGPEIIGMTLTYDMSAGPEKILCVPLMLS-FTATYILRGVRLLIMFTPRSRQRWG 176          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15144.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.330e-9
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 0
Query:   32 SMYSLVCLSHIAQMWGMRHEFQVAVRSPVLATLSGCSGVLMITVSIYRFTLEISPEASAVDLVLAPMLLTAYTGV--YVMRGFRLLVMYNPAMRGRFG 127
            ++Y LV LSHI+  W +R +F  AVRSPVL T SG +GVL  + ++ R T+      S   L +  + LTA   V  Y++RG R++VMY P+ R R+G
Sbjct:   18 NVYCLVTLSHISATWVLRKDFYFAVRSPVLMTASGLAGVLAGSTAVSR-TVMFPGLRSLFILRIFSIPLTALCLVVAYILRGLRVIVMYTPSRRQRWG 114          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15144.1 vs. uniprot
Match: A0A6H5KX00_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX00_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 4.330e-9
Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 0
Query:   20 VFALDAIVLAGGSMYSLVCLSHIAQMWGMRHEFQVAVRSPVLATLSGCSGVLMITVSIYRFTLE-----ISPEASAVDLVLAPMLLTAYTGVYVMRGFRLLVMYNPAMRGRFG 127
            V A+D  +LA  ++YS VCL  +A MW +R  F + +RSP+LA   G    L   V I+  TL      +        L+  P LL +   + VM   RLLVM+ P +R ++G
Sbjct:    7 VVAIDIFILAAATVYSFVCLGFVAAMWSLRRNFFIVLRSPLLACTLGLCITLRFEVLIFAHTLHWGHSGLVASDGVTSLIEFPALLISEFAL-VMSAVRLLVMFFPKLRAKWG 118          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15144.1 vs. uniprot
Match: D8LTR6_ECTSI (Developmental regulator FlbA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR6_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.500e-8
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 0
Query:   20 VFALDAIVLAGGSMYSLVCLSHIAQMWGMRHEFQVAVRSPVLATLSGCSGVLMITVSIYRFTLE-----ISPEASAVDLVLAPMLLTAYTGVYVMRGFRLLVMYNPAMRGRFG 127
            V A+D  +LA  ++YS VCL  IA MW +R  F + +RSP+LA   G    L     ++  TL      +       +++  P+LL +   + VM   RLLVM+ P +R ++G
Sbjct:    7 VLAIDIFILAAATVYSFVCLGFIAAMWSLRRNFFIVLRSPLLACTLGLCITLRFEFLLFAHTLHWGHSGLVASHGVTNMIEFPVLLISEFAL-VMSAVRLLVMFFPKLRAKWG 118          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15144.1 vs. uniprot
Match: A0A6H5K976_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K976_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 2.970e-6
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   57 RSPVLATLSGCSGVLMITVSIYRFTLE--------ISPEASAVDLVLAPMLLTAYTGVYVMRGFRLLVMYNPAMRGRFG 127
            RSP+L T+SG +GV     S++ F           ++ + +   ++  P++L A+ G Y++RG RLLVMYNP MR R+G
Sbjct:   51 RSPLLGTVSGLAGV-----SVWAFATTGAVINSEVVNAQLAFAPIITVPLVLVAFVGAYIIRGIRLLVMYNPHMRHRWG 124          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KBN3_9PHAE4.940e-1539.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYZ5_ECTSI8.760e-1437.29RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LLA9_ECTSI2.330e-942.86RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KX00_9PHAE4.330e-935.40RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LTR6_ECTSI1.500e-833.63Developmental regulator FlbA n=1 Tax=Ectocarpus si... [more]
A0A6H5K976_9PHAE2.970e-637.97RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..116
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 95..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1610312..1612435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15144.1mRNA_E-siliculosus-1a_M_contig7.15144.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1610312..1612435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15144.1 ID=prot_E-siliculosus-1a_M_contig7.15144.1|Name=mRNA_E-siliculosus-1a_M_contig7.15144.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=127bp
PWPVLNTFYTHRSPPSVIMVFALDAIVLAGGSMYSLVCLSHIAQMWGMRH
EFQVAVRSPVLATLSGCSGVLMITVSIYRFTLEISPEASAVDLVLAPMLL
TAYTGVYVMRGFRLLVMYNPAMRGRFG
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