prot_E-siliculosus-1a_M_contig7.15137.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15137.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15137.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length434
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15137.1 vs. uniprot
Match: A0A6H5JVW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW6_9PHAE)

HSP 1 Score: 775 bits (2001), Expect = 1.470e-281
Identity = 406/433 (93.76%), Postives = 414/433 (95.61%), Query Frame = 0 
Query:    1 MTFFVGDLVVSVSGCCIDENAGPLLNPCVELSVGNKLHSTRLPVESRGGTVGEGEGASRKRRSSAVAFHGVTERDVLMVTVLDRSPPPTSTAPDGRTRPPYVAEAKPLRCTHWGSGGRPTRRTCVVAPPEEVQELASGGSAVGRDGGDPCGRGGANSGGGSDVLCRGRESTVQLAICWSPAIRLKRPLSLVARAGRLTARVVSRKIDRPAAAVLNLGLGGAEKASDFLLFGDPRLKAAALVASAVSLSLWSAFVVAAAACFLPVMLALSAAAAATFATLAPPALALTWVFACTGPACEQLWRPLLVWTGTRWGSFRRLLLLPLEIEAESWGEGGDGGDRGVLLKGPETSAMGEETARRWLPPPSAADGRQAEEKPNSVIPVGGEGSQDSGGGVRNGGNAADAGAVVLLLACYQNLIGVLYTGLEASRWRPRPR 433
            MTFFVGDLVVSVSGCCIDENAGPLLNPCVELSVGNKLHSTRLPVESRGGTVGEGEGASRKRRSSAVAFHGVTERDVLMVTVLDRS PP+S APDGRTRP YVAEAKPLRCTHWGSGGRPTRRTCVVAPPEE QELASGGSAV RDGGDP GRGGA SG GS+VL RG ESTVQLAICWSPAIRLKRPLSLVARAGRLTARVVSRKIDRPAAAVLNLGLGGAEKASDF LFGDPRLKAAALVA AVS+SL SA VVAAAACFLPVMLALSAAAAATFATL PPALALTWVFACTGPACEQLWRPLLVWTGTRWG FRRLLLLPLEIEAES GEGGDGGDRGVLLKG ETSAMGEETARRWLPPPSAADGRQAEEKPN++IPVGGEGSQ+ GGGVRNGGNAADAGAVVLLLACYQNLIGVL++GLEASRWRPRPR
Sbjct:    1 MTFFVGDLVVSVSGCCIDENAGPLLNPCVELSVGNKLHSTRLPVESRGGTVGEGEGASRKRRSSAVAFHGVTERDVLMVTVLDRSSPPSSAAPDGRTRPLYVAEAKPLRCTHWGSGGRPTRRTCVVAPPEEAQELASGGSAVDRDGGDPRGRGGATSGVGSEVLRRGGESTVQLAICWSPAIRLKRPLSLVARAGRLTARVVSRKIDRPAAAVLNLGLGGAEKASDFFLFGDPRLKAAALVAFAVSMSLGSAVVVAAAACFLPVMLALSAAAAATFATLGPPALALTWVFACTGPACEQLWRPLLVWTGTRWGLFRRLLLLPLEIEAESLGEGGDGGDRGVLLKGLETSAMGEETARRWLPPPSAADGRQAEEKPNAIIPVGGEGSQERGGGVRNGGNAADAGAVVLLLACYQNLIGVLHSGLEASRWRPRPR 433
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15137.1 vs. uniprot
Match: D7FN99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN99_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 8.500e-153
Identity = 247/287 (86.06%), Postives = 251/287 (87.46%), Query Frame = 0 
Query:   19 ENAGPLLNPCVELSVGNKLHSTRLPVESRGGTVGEGEGASRKRRSSAVAFHGVTERDVLMVTVLDRSPPPTSTAPDGRTRPPYVAEAKPLRCTHWGSGGRPTRRTCVVAPPEEVQELASGGSAVGRDGGDPCGRGGANSGGGSDVLCRGRESTVQLAICWSPAIRLKRPLSLVARAGRLTARVVSRKIDRPAAAVLNLGLGGAEKASDFLLFGDPRLKAAALVASAVSLSLWSAFVVAAAACFLPVMLALSAAAAATFATLAPPALALTWVFACTGPACEQLWRPLL 305
            +NAGPLLNPCVELSVGNKLHSTRLPVESRG TVGEGEGASRKRRSSAVAFHGVTER                        PPYVAEAKPLRCTHWGSGGRPTRRTCVVAP EEVQELASG SAVGR+G DP GRGGANSGG S+V+ RG ESTVQLAICWSPAIRLKRPLSLVARAGRLTA VVSRKIDRPAAAVLNLGLGGAEKASDFL FGDPRLKAAALVASAVSLSL SA VVAAAACFLPVMLALSAAAAATFATLAPPALALTWVFACTGPACEQLWRPLL
Sbjct:   16 QNAGPLLNPCVELSVGNKLHSTRLPVESRGVTVGEGEGASRKRRSSAVAFHGVTER------------------------PPYVAEAKPLRCTHWGSGGRPTRRTCVVAPLEEVQELASGASAVGRNGVDPRGRGGANSGGWSEVVRRGGESTVQLAICWSPAIRLKRPLSLVARAGRLTAHVVSRKIDRPAAAVLNLGLGGAEKASDFLFFGDPRLKAAALVASAVSLSLGSAVVVAAAACFLPVMLALSAAAAATFATLAPPALALTWVFACTGPACEQLWRPLL 278
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVW6_9PHAE1.470e-28193.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN99_ECTSI8.500e-15386.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 265..269
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 293..433
NoneNo IPR availableTMHMMTMhelixcoord: 237..259
NoneNo IPR availableTMHMMTMhelixcoord: 266..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1527302..1533446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15137.1mRNA_E-siliculosus-1a_M_contig7.15137.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1527299..1533446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15137.1 ID=prot_E-siliculosus-1a_M_contig7.15137.1|Name=mRNA_E-siliculosus-1a_M_contig7.15137.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=434bp
MTFFVGDLVVSVSGCCIDENAGPLLNPCVELSVGNKLHSTRLPVESRGGT
VGEGEGASRKRRSSAVAFHGVTERDVLMVTVLDRSPPPTSTAPDGRTRPP
YVAEAKPLRCTHWGSGGRPTRRTCVVAPPEEVQELASGGSAVGRDGGDPC
GRGGANSGGGSDVLCRGRESTVQLAICWSPAIRLKRPLSLVARAGRLTAR
VVSRKIDRPAAAVLNLGLGGAEKASDFLLFGDPRLKAAALVASAVSLSLW
SAFVVAAAACFLPVMLALSAAAAATFATLAPPALALTWVFACTGPACEQL
WRPLLVWTGTRWGSFRRLLLLPLEIEAESWGEGGDGGDRGVLLKGPETSA
MGEETARRWLPPPSAADGRQAEEKPNSVIPVGGEGSQDSGGGVRNGGNAA
DAGAVVLLLACYQNLIGVLYTGLEASRWRPRPR*
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