prot_E-siliculosus-1a_M_contig7.15098.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15098.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15098.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length149
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15098.1 vs. uniprot
Match: D7FPC1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPC1_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 3.830e-96
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0 
Query:    1 MSTSFAAGVLAYMLATFNGGYLWHLVLFNDMYLSLKVWTRFPEDIGLQLGASAVLLQQALLVAYMLPVFQRATGRSGTLSGALFGLWVAGLVFSVAVLAHSAKNQTACVEGFVAMEGLYCLLQFPLSCSFVAFSQGRAAPQAPSKKAT 148
            MSTSFAAGVLAYMLATFNGGYLWHLVLFNDMYLSLKVWTRFPEDIGLQLGASAVLLQ ALLVAYMLP+FQRATGRSGTLSGALFGLWVAGLVFSVAVLAHSAKNQTACVEGFVAMEGLYCLLQFPLSCSFVAFSQGRAA QAPSKKAT
Sbjct:    1 MSTSFAAGVLAYMLATFNGGYLWHLVLFNDMYLSLKVWTRFPEDIGLQLGASAVLLQ-ALLVAYMLPIFQRATGRSGTLSGALFGLWVAGLVFSVAVLAHSAKNQTACVEGFVAMEGLYCLLQFPLSCSFVAFSQGRAARQAPSKKAT 147
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15098.1 vs. uniprot
Match: A0A3A0CXL5_9BACT (DUF1761 domain-containing protein n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0CXL5_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 8.470e-13
Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 0 
Query:   11 AYMLATFNGGYLWHLVLFNDMYLSLKVWTRFPEDIGLQLGASAVLLQQALLVAYMLPVFQRATGRSGTLSGALFGLWVAGLVFSVAVLAHSAKNQTACVEGFVAMEGLYCLLQFPLS 127
            AY+  TF  G++WHLVLF D+Y  L +++R    I + LG SA+L+Q A+L +Y    F +    S  L+G  FGL     + S AV+A +AK     +  ++ +E +Y LLQF LS
Sbjct:   12 AYVAITFCLGFVWHLVLFKDLYHELAIFSRIDNPI-IPLGFSAMLIQGAVL-SYAYRFFPQR--HSSVLNGIKFGLLAGVFIASSAVIAEAAKQNVTSLSIWLLVETVYYLLQFGLS 124
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15098.1 vs. uniprot
Match: A0A2A5ETH2_9HYPH (Uncharacterized protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5ETH2_9HYPH)

HSP 1 Score: 53.1 bits (126), Expect = 4.810e-6
Identity = 39/117 (33.33%), Postives = 58/117 (49.57%), Query Frame = 0 
Query:    8 GVLAYMLATFNGGYLWHLVLFNDMYLSLKVWTRFPEDIGLQLGASAVLLQQALLVAYMLPVFQRATGRSGTLSGALFGLWVAGLVFSVAVLAHSAKNQTACVEGFVAMEGLYCLLQF 124
            G LAY L TF    +WH+VLF   Y+S   +   P  +   LG   +L+Q  L+++ + P    +   +GT  G  + L++    ++  VLA  AK        F+AME  Y LLQF
Sbjct:    9 GTLAYALVTFPLAVVWHVVLFEQKYISFGYFEGEPNFV---LGFLIILIQ-GLMLSILYP--HVSFSGNGTARGIKYALFIGLFFWTSHVLAFIAKQIITDPLLFIAMESFYLLLQF 119
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15098.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPC1_ECTSI3.830e-9697.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3A0CXL5_9BACT8.470e-1339.32DUF1761 domain-containing protein n=1 Tax=candidat... [more]
A0A2A5ETH2_9HYPH4.810e-633.33Uncharacterized protein n=1 Tax=Rhodobiaceae bacte... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 5..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..148
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..77
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 111..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1176511..1181190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15098.1mRNA_E-siliculosus-1a_M_contig7.15098.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1176511..1181190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15098.1 ID=prot_E-siliculosus-1a_M_contig7.15098.1|Name=mRNA_E-siliculosus-1a_M_contig7.15098.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=149bp
MSTSFAAGVLAYMLATFNGGYLWHLVLFNDMYLSLKVWTRFPEDIGLQLG
ASAVLLQQALLVAYMLPVFQRATGRSGTLSGALFGLWVAGLVFSVAVLAH
SAKNQTACVEGFVAMEGLYCLLQFPLSCSFVAFSQGRAAPQAPSKKAT*
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