prot_E-siliculosus-1a_M_contig7.15087.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15087.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15087.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length113
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15087.1 vs. uniprot
Match: D7FPB2_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB2_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 1.750e-6
Identity = 29/41 (70.73%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 MSRDSNYDHQITVFSPQGRLYQV-VCLQGGDGAGL-DVSVR 39
            MSRDSNYDHQITVFSPQGRLYQ+    +   G GL  VSVR
Sbjct:    1 MSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVR 41          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15087.1 vs. uniprot
Match: A0A835YUN1_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN1_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.310e-5
Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 MSRDSNYDHQITVFSPQGRLYQV-VCLQGGDGAGL-DVSVR 39
            MSRDSNYDH IT+FSPQGRLYQ+    +    +GL  V+VR
Sbjct:    1 MSRDSNYDHHITIFSPQGRLYQIEYAFKAASSSGLTSVAVR 41          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15087.1 vs. uniprot
Match: A0A7S3L6C6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6C6_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.360e-5
Identity = 24/42 (57.14%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    1 MSRDSNYDHQITVFSPQGRLYQVVCLQGGDGAGLDVSVREGK 42
            MSRDSNYDH I++FSPQGRLYQ+        +GL V    GK
Sbjct:    1 MSRDSNYDHHISIFSPQGRLYQMEYCFKAANSGLTVVAVRGK 42          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15087.1 vs. uniprot
Match: A0A1E7FTN7_9STRA (Putative proteasome subunit alpha type 6 n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FTN7_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 8.250e-5
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    1 MSRDSNYDHQITVFSPQGRLYQV-VCLQGGDGAGLDVSVR 39
            MSRDSNYDH I++FSPQGRLYQ+  C +  +     V++R
Sbjct:    1 MSRDSNYDHHISIFSPQGRLYQMEYCFKAANSGLTGVAIR 40          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15087.1 vs. uniprot
Match: A0A7S2Y5Q9_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y5Q9_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 8.250e-5
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 MSRDSNYDHQITVFSPQGRLYQV-VCLQGGDGAGLDVSVREGK 42
            MSRDSNYDH I++FSPQGRLYQ+  C +    +GL V    GK
Sbjct:    1 MSRDSNYDHHISIFSPQGRLYQMEYCFKAAQ-SGLTVVAVRGK 42          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15087.1 vs. uniprot
Match: B7FRJ8_PHATC (Proteasome alpha 1 subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRJ8_PHATC)

HSP 1 Score: 50.1 bits (118), Expect = 8.250e-5
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 MSRDSNYDHQITVFSPQGRLYQV-VCLQGGDGAGLDVSVREGK 42
            MSRDSNYDH I++FSPQGRLYQ+  C +    +GL V    GK
Sbjct:    1 MSRDSNYDHHISIFSPQGRLYQMEYCFKAAQ-SGLTVVAVRGK 42          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15087.1 vs. uniprot
Match: A0A7S2C157_9STRA (Proteasome subunit alpha type n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C157_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 8.430e-5
Identity = 26/41 (63.41%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 MSRDSNYDHQITVFSPQGRLYQV-VCLQGGDGAGLD-VSVR 39
            MSRD+NYD  IT+FSPQGRLYQV   L+  D  GL  V+VR
Sbjct:    9 MSRDANYDRHITIFSPQGRLYQVEYALKAADSTGLTAVAVR 49          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FPB2_ECTSI1.750e-670.73Proteasome subunit alpha type n=1 Tax=Ectocarpus s... [more]
A0A835YUN1_9STRA4.310e-560.98Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A7S3L6C6_9STRA4.360e-557.14Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1E7FTN7_9STRA8.250e-555.00Putative proteasome subunit alpha type 6 n=2 Tax=B... [more]
A0A7S2Y5Q9_9STRA8.250e-558.14Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
B7FRJ8_PHATC8.250e-558.14Proteasome alpha 1 subunit n=1 Tax=Phaeodactylum t... [more]
A0A7S2C157_9STRA8.430e-563.41Proteasome subunit alpha type n=1 Tax=Dictyocha sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000426Proteasome alpha-subunit, N-terminal domainPFAMPF10584Proteasome_A_Ncoord: 7..23
e-value: 1.2E-7
score: 31.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1052982..1056228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15087.1mRNA_E-siliculosus-1a_M_contig7.15087.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1052982..1058352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15087.1 ID=prot_E-siliculosus-1a_M_contig7.15087.1|Name=mRNA_E-siliculosus-1a_M_contig7.15087.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=113bp
MSRDSNYDHQITVFSPQGRLYQVVCLQGGDGAGLDVSVREGKGDERHGHP
EKSAGSVDRPYLRDEHLQDHRQDWLSHDGHDRRLESVGAAGAVRGPRVPV
QVRLRLPGARAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000426Proteasome_asu_N