prot_E-siliculosus-1a_M_contig7.15086.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15086.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15086.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length108
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: D7FPB1_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPB1_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 5.360e-70
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
Query:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFTFTQ 107
            MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFTFTQ
Sbjct:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFTFTQ 107          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: A0A835ZB30_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB30_9STRA)

HSP 1 Score: 109 bits (272), Expect = 7.470e-29
Identity = 52/80 (65.00%), Postives = 57/80 (71.25%), Query Frame = 0
Query:   28 SVSRPTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFTFTQ 107
            SV R  +SL MA   FPGGKK +   G  LK V  KA Y A YGCEEGKCG+CEHKV GKK+RLCIGK+P G GP TFTQ
Sbjct:   28 SVVRAPSSLYMAQCIFPGGKKAEGKPGEALKAVVAKAKYDAPYGCEEGKCGSCEHKVGGKKVRLCIGKVPPGNGPHTFTQ 107          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: A0A7R9UCS5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCS5_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.270e-20
Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = 0
Query:   18 AFMAPS-VTVRSVSRPTNSLSM-ADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPF 103
            AF+ P  +  R+ ++    +SM  +V FPGGKKT A  G P K VA +AG+K  YGC++G CG CE KVNGKK+R C+ K+PA   P 
Sbjct:   42 AFLPPKGLATRAPAQQRGQMSMNIEVVFPGGKKTTAKAGEPFKNVAARAGFKPTYGCKQGSCGACEIKVNGKKVRPCVAKVPASNKPL 129          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: A0A4D9CYU4_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYU4_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.830e-17
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    1 MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSR--PTNSLSMADVTFPGGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHK-VNGKKIRLCIGKLPAGAGPFTF 105
            M  R+V  ++ ++A   AF AP      + R  P  +  + +V +PG KK KA  G  LK VA +A Y   YGCEEGKCG+CEHK  +GKK R+CI K+P  AGP T 
Sbjct:    1 MMLRIVQALILLMA-TTAFFAPHAPSAGIKRGGPVYNGDV-EVIWPGNKKVKAKPGEALKAVAARARYTPNYGCEEGKCGSCEHKGSDGKKYRVCITKVPKIAGPLTL 106          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: A0A2D5MUZ7_9BACT (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MUZ7_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 1.660e-7
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0
Query:   56 PLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPA 98
            PLK + + AG    + CE GKCGTCE++V+G+  RLC   +PA
Sbjct:   45 PLKKIVKAAGAPVKFNCENGKCGTCENRVDGRLTRLCTATVPA 87          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: B8C2R5_THAPS (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2R5_THAPS)

HSP 1 Score: 53.5 bits (127), Expect = 1.130e-6
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   57 LKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAG 99
            +  V   A  K  Y C+ G+CGTC  K+NG+KIR C+ K+P+G
Sbjct:   89 ISQVCNAARVKVPYNCQNGECGTCTVKMNGRKIRACVSKVPSG 131          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: A0A7S4IHS5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IHS5_9EUKA)

HSP 1 Score: 53.1 bits (126), Expect = 2.290e-6
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   40 DVTFP--GGKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKK-IRLCIG-KLPAGA 100
            +VTFP  G K  KA  G P+  V ++AG +  + C+ G+CGTC+ ++NG+  +++C G  +P GA
Sbjct:   85 EVTFPQKGNKVVKAKQGEPIGAVCKRAGVRVKFDCKNGRCGTCQVRLNGRSALKVCQGGTVPGGA 149          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: R1D5J6_EMIHU (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D5J6_EMIHU)

HSP 1 Score: 49.3 bits (116), Expect = 2.290e-5
Identity = 19/44 (43.18%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   54 GAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLP 97
            G  L+ VA+ AG    Y C EG C TC+ K+ G  +++C+GK+P
Sbjct:   48 GQKLRDVARAAGIPIKYSCNEGTCKTCQVKMGGGMVKVCVGKVP 91          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: A0A7S1VCI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VCI6_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.380e-5
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0
Query:   46 GKKTKANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAG 99
            GK  KA  G  +K VA  A  K +Y C++G CGTC  K+NG+K++ C   +  G
Sbjct:   79 GKPAKAVVGQSVKVVANAARVKISYDCQQGDCGTCMIKMNGRKVKACQMSIGTG 132          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Match: A0A6U3ZFR1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3ZFR1_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.420e-5
Identity = 19/48 (39.58%), Postives = 27/48 (56.25%), Query Frame = 0
Query:   57 LKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGAGPFT 104
            +  V   A  K  Y C+ G CGTC  K+NG++ + C+ K+PAG    T
Sbjct:   90 ISQVCASARVKVPYNCQNGDCGTCMVKINGRQAKACVSKVPAGKCAIT 137          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FPB1_ECTSI5.360e-70100.002Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A835ZB30_9STRA7.470e-2965.002Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7R9UCS5_9STRA3.270e-2048.86Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CYU4_9STRA1.830e-1745.372Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A2D5MUZ7_9BACT1.660e-748.842Fe-2S ferredoxin-type domain-containing protein n... [more]
B8C2R5_THAPS1.130e-646.512Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4IHS5_9EUKA2.290e-640.00Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
R1D5J6_EMIHU2.290e-543.182Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S1VCI6_9STRA2.380e-542.59Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A6U3ZFR1_9STRA2.420e-539.58Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 23..95
e-value: 3.1E-7
score: 31.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 50..88
e-value: 6.0E-6
score: 26.1
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 72..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..107
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.789
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 36..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:1047706..1052526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15086.1mRNA_E-siliculosus-1a_M_contig7.15086.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 1046529..1052526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15086.1 ID=prot_E-siliculosus-1a_M_contig7.15086.1|Name=mRNA_E-siliculosus-1a_M_contig7.15086.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=108bp
MFSRVVSLMVCMLAGAAAFMAPSVTVRSVSRPTNSLSMADVTFPGGKKTK
ANGGAPLKTVAQKAGYKAAYGCEEGKCGTCEHKVNGKKIRLCIGKLPAGA
GPFTFTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0060582Fe2S_fd_BS
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf