prot_E-siliculosus-1a_M_contig7.15079.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15079.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15079.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length99
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15079.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 4.200e-18
Identity = 55/95 (57.89%), Postives = 60/95 (63.16%), Query Frame = 0 
Query:   10 TTCGRQQAHLIAHRPYPACALDRLKERDSAGDNVSYVLARMVWSNLQYLAALAIGAKG----LEREPMPARGV---FSARYEGIPRDVLLAVLRH 97
            TTCGRQQAH+IA        LDR KERDS GDNVSYVLAR V   LQYLAA  IGA G      R    AR +   F    EGIPRDV+LA+LR+
Sbjct:  130 TTCGRQQAHIIAGVSIQH-VLDRQKERDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15079.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 2.390e-11
Identity = 42/76 (55.26%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:   14 RQQAHLIAHRPYPACALDRLKERDSAGDNVSYVLARMVWSNLQYLAALAIGAKGLEREPMPARGVFSARYEGIPRD 89
            RQQAH+IA        LDR K RDS GDNV YVLAR V SNLQYLAA  IGA G   +    RG+F +RY  + R 
Sbjct:  101 RQQAHIIAGVSIQH-VLDRQKARDSEGDNVPYVLARTVRSNLQYLAAQEIGATGQGNQCR--RGMFCSRYGHVLRQ 173
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15079.1 vs. uniprot
Match: A0A6H5K9U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U2_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 8.120e-5
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 0 
Query:   10 TTCGRQQAHLIAHRPYPACALDRLKERDSAGDNVSYVLARMVWS 53
            TTCGRQQAH+IA           ++ERDS GDNVSYVLAR V S
Sbjct:  126 TTCGRQQAHIIAGVS--------IQERDSQGDNVSYVLARTVRS 161
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE4.200e-1857.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI2.390e-1155.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9U2_9PHAE8.120e-561.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:967519..968532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15079.1mRNA_E-siliculosus-1a_M_contig7.15079.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 967519..968532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15079.1 ID=prot_E-siliculosus-1a_M_contig7.15079.1|Name=mRNA_E-siliculosus-1a_M_contig7.15079.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=99bp
SGTPATQQTTTCGRQQAHLIAHRPYPACALDRLKERDSAGDNVSYVLARM
VWSNLQYLAALAIGAKGLEREPMPARGVFSARYEGIPRDVLLAVLRHF*
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