prot_E-siliculosus-1a_M_contig7.15073.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15073.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15073.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length1010
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15073.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 848 bits (2190), Expect = 1.450e-292
Identity = 784/1021 (76.79%), Postives = 801/1021 (78.45%), Query Frame = 0
Query:    1 MSAGRRRRVMLESDDEDDAGVGEQGSGEVSVTPHVAPPTAEQARPSKSRRSMKVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAERWSKLEEDSDHDLSDGDGGDASGAKPSSLVQLQFHETWGRGSRSRTQSRQSRQLVKEPPPSGDEVEDSSDSDDGLGGFIVDSEDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPVRRSSRTQKGKAVADKDPGSGKRGKTVAVGSEPEVAGPSXXXXXXXXXXXXXXFSMQPASSKKRGKGTRKDGRTRGRSGEAVVDVEEASPAQVGTRGAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AGRXKDKKAGGKSGGKGIKEEAPAAAAGRATRTRRRSSMVNYREMLHGNGTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-----EVDGKKPGDKCARDQDIDEDDSFAVTLQDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKRNHRYNEPDXXXXXXXXXXXXXXXXXXXXXX--DAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPSRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKNKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGELEGQRPELGEGXXXXXXXXXFH-VGRGRRWRTVGSSGGRYG 1009
            MSAGRRRRVMLESDDEDDA V EQGSGEVSVTPHV PPT EQARPSKSRRSMK+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAERWSKLEEDSDH+LSDGDGGDASGAK SSLVQLQFHETWGRG+RSRT SRQ+   + +  P+         +   +G                                                                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EPVRRSSR QKGKAVAD                        XXXXXXXXXXXX  FSMQPASSKKRGK TR DGRT GRSGE VVDVEEASPA+VGTRGAGS XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXX                AGR K          KGIKEEAP              SMVNYREMLHGNGT XXXXXXXXXXXXXXXXXX   XXXXXXXX      E+DGKKPG+KCA D+DIDE DSFAVT+QD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXX    XXXXXXXX     DAFFSHAAFFNEMEQSEDGG+SSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRL DRCSACNRSNRTSVIAFLSGSEYDP+RVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSK +KKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYG LDLGELEGQ P     XXXXXXXXX   VGRGRRWRTVGSS GRYG
Sbjct:    1 MSAGRRRRVMLESDDEDDAAVREQGSGEVSVTPHVLPPTTEQARPSKSRRSMKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAERWSKLEEDSDHELSDGDGGDASGAKRSSLVQLQFHETWGRGARSRTASRQA---ISQGAPAVRRRGKQKSAPASVGAATF-----------------------------------------ANGGGSSRNTRKSGRRKSVANASGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVRRSSRAQKGKAVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEFSMQPASSKKRGKDTRIDGRTMGRSGEEVVDVEEASPARVGTRGAGSKXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXVPVKSVGNGKKSTKENAGREKXXXXXXXXXXKGIKEEAPXXXXXXXXXXXXXXSMVNYREMLHGNGTXXXXXXXXXXXXXXXXXXXGWDXXXXXXXXXXXSDGELDGKKPGNKCATDEDIDEXDSFAVTIQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFIDXXXXXXXXGEDGGDAFFSHAAFFNEMEQSEDGGVSSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLNDRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLGELEGQGPXXXXXXXXXXXXXXXXDVGRGRRWRTVGSSSGRYG 977          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15073.1 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 641 bits (1653), Expect = 3.510e-214
Identity = 694/812 (85.47%), Postives = 701/812 (86.33%), Query Frame = 0
Query:   10 MLESDDEDDAGVGEQGSGEVSVTPHVAPPTAEQARPSKSRRSMKVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAERWSKLEEDSDHDLSDGDGGDASGAKPSSLVQLQFHETWGRGSRSRTQSRQSRQLVKEPPPSGDEVEDSSDSDDGLGGFIVDSEDEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----DEPVRRSSRTQKGKAVADKDPGSGKRGKTVAVGSEPEVAGPSXXXXXXXXXXXXXXFSMQPASSKKRGKGTRKDGRTRGRSGEAVVDVEEASPAQVGTRGAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AGRXKDKKAGGKSGGKGIKEEAPAAAAGRATRTRRRSSMVNYREMLHGNGTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEVDGKKPGDKCARDQDIDEDDSFAVTLQDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRK--RNHRYNEPDXXXXXXXXXXXXXXXXXXXXXXDAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPSRV 811
            MLESDDEDDAGVGEQG GEVSVTPHV PPTAEQ RPSKSRRSMKVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   QLAERWSKLEEDSDHDLSDGDG DASGAK SSLVQLQFHETWGRGSRSRT SR+   LVKEPPPSGDEV DS                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   XXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     D+PVRRSSR QKGK VADKDPGSGKR KT AVGSEPE AGPSXXXXXXXXXXXX  FSMQPA SKKRGKGTRKDG TRGRSGE VVDVEEASPA+VGTRGAGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GR KDKK GGKSGGKGIKEEAPAAA GRATRTRRRSSMVNYREMLHG GTS XXXXXXXXXXXXXXXX             E+DGKK GDKCARD+DIDEDDSFAVTL+DDE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RNHRYNEPD         XXXXXXXXXXXXXDAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDP+RV
Sbjct:    1 MLESDDEDDAGVGEQGLGEVSVTPHVTPPTAEQTRPSKSRRSMKVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---QLAERWSKLEEDSDHDLSDGDGDDASGAKRSSLVQLQFHETWGRGSRSRTASRR---LVKEPPPSGDEVGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTRKSGRRKSGANASEIDDXXXXXXXXSRADGHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKPVRRSSRLQKGKGVADKDPGSGKRRKTSAVGSEPESAGPSXXXXXXXXXXXXEEFSMQPAGSKKRGKGTRKDGGTRGRSGEEVVDVEEASPARVGTRGAGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVGRGKDKKVGGKSGGKGIKEEAPAAATGRATRTRRRSSMVNYREMLHGKGTSSXXXXXXXXXXXXXXXXSGWDNDDEDESDGELDGKKSGDKCARDEDIDEDDSFAVTLKDDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNHRYNEPDDGDEDNFIDXXXXXXXXXXXXXDAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 806          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15073.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 1.010e-121
Identity = 197/230 (85.65%), Postives = 203/230 (88.26%), Query Frame = 0
Query:  780 CRLTDRCSACNRSNRTSVIAFLSGSEYDPSRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKNKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGELEGQRPELGEGXXXXXXXXXFHVGRGRRWRTVGSSGGRYG 1009
            C +   C  C+R     ++ F         +VWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGP TSK KKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLG+LEGQR  LG  XXXXXXXXXFHVGRGRRWRTVGSSGGRYG
Sbjct:   37 CLIRSVCLCCSRLT-CPLLPFR--------KVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGDLEGQRAGLGXXXXXXXXXXXFHVGRGRRWRTVGSSGGRYG 257          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15073.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.150e-14
Identity = 64/208 (30.77%), Postives = 97/208 (46.63%), Query Frame = 0
Query:  701 YVEYIAKATQGDGAGEAFMKKYVAQPRIPEHA--RYGKAKEMVEKKLRISGESLC--GSWRQDFRDTIMRYPHYGYHH------------------VDGDLCRLTDRCSACNRSNRTSVIA-FLSGSEYDPSRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFR 885
            Y+E++AKA QG G G AFM+K+ ++     HA   Y KA +  E ++    ES+   GSW Q+F   +  YP  G+H                   +D +     D C+AC+R  R ++   +L+GS                             +KQ+ +    LG  C++KSHL+H+L HYKLYLV KV   +   +G+ PE+ R
Sbjct:  940 YLEFLAKAVQGGGKGAAFMEKFDSK----RHAFTDYRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHFGVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGSR------------------------GGYKSKQKVRERLGLGGRCRYKSHLYHTLLHYKLYLVCKVREHM-DTTGVGPEDLR 1118          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KKK5_9PHAE1.450e-29276.79DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8T9_ECTSI3.510e-21485.47DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8T8_ECTSI1.010e-12185.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLB0_ECTSI2.150e-1430.77RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 585..608
IPR025451Domain of unknown function DUF4211PFAMPF13926DUF4211coord: 647..809
e-value: 1.6E-10
score: 41.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:891521..902237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15073.1mRNA_E-siliculosus-1a_M_contig7.15073.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 891430..902246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15073.1 ID=prot_E-siliculosus-1a_M_contig7.15073.1|Name=mRNA_E-siliculosus-1a_M_contig7.15073.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1010bp
MSAGRRRRVMLESDDEDDAGVGEQGSGEVSVTPHVAPPTAEQARPSKSRR
SMKVIAADEDDDEDGDDDGSGGGGLFGGADSGGESVGGGDEQEDDEDDEA
ERKRRRQLAERWSKLEEDSDHDLSDGDGGDASGAKPSSLVQLQFHETWGR
GSRSRTQSRQSRQLVKEPPPSGDEVEDSSDSDDGLGGFIVDSEDEQDVDG
GGGGDGGGSGSKKKKKGKNKNAAASAGAATSSNGGGSSRNTRKSGRRKSG
ANASGTDDDEDDAEAASRGDGHAAASASKKRRSRGKSEPEEEEEGDGRPT
GRKRARRSKASARAETSAAADGDGEEEENDEPVRRSSRTQKGKAVADKDP
GSGKRGKTVAVGSEPEVAGPSSSDDDDDDDDSDEEFSMQPASSKKRGKGT
RKDGRTRGRSGEAVVDVEEASPAQVGTRGAGSKTKSKGKGKGKGKSGGGG
SPIVLSSQEEEEEVAVKPVGKGKKKAKEKAGRGKDKKAGGKSGGKGIKEE
APAAAAGRATRTRRRSSMVNYREMLHGNGTSSSEEEDGNGGGGGGEDESG
WDNDDDDESDEEVDGKKPGDKCARDQDIDEDDSFAVTLQDDEEEEEEEEE
EIEAVGSKGSGGRAKRSRSEKGGSGSKRKGRKRNHRYNEPDDDDEDNFID
DDDDDDDDEEDGGDAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLF
YVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGE
SLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAF
LSGSEYDPSRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKH
KSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKNKKKRC
LNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSIL
DWLSGEAQQGQYGDLDLGELEGQRPELGEGESEDEDEEEFHVGRGRRWRT
VGSSGGRYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025451DUF4211