prot_E-siliculosus-1a_M_contig7.15055.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig7.15055.1
Unique Name	prot_E-siliculosus-1a_M_contig7.15055.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	172

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: D7G8V9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8V9_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 6.820e-122
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0

Query:    1 MAASDMVGASAPLGFFDPMGFSKGPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRGVYSGGIH 171
            MAASDMVGASAPLGFFDPMGFSKGPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEY+ISQIVAKPGYIPGDYVGANDLFSEEGPH QWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRGVYSGGIH
Sbjct:   42 MAASDMVGASAPLGFFDPMGFSKGPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGPHSQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRGVYSGGIH 212

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: I2CPJ1_NANGC (Protein fucoxanthin chlorophyll a c protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ1_NANGC)

HSP 1 Score: 166 bits (419), Expect = 8.470e-49
Identity = 91/174 (52.30%), Postives = 118/174 (67.82%), Query Frame = 0

Query:    1 MAASDMVGASAPLGFFDPMGFS-KGPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLF--SEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRG---VYSG 168
            M    M+G+SAP   FDP+GF+ K   + LN YRE+ELKHGR AMLAV+G++ QE WHPLY+G LSSNP+KA+TEVP  G  QI + I  +EY+ ++I   PGY PGDY+G  +    S+EG    W+ YQ KEL+NGR AM+ I GL+  + +TG   A EQIS G   V+SG
Sbjct:   37 MGLDGMIGSSAPFKNFDPLGFAAKADQKTLNKYRESELKHGRVAMLAVLGWVVQEVWHPLYDGKLSSNPLKALTEVPLIGWAQIFVAINVIEYLQNKIKELPGYRPGDYLGTWEWVEQSDEG----WDNYQTKELNNGRLAMVAIAGLIAQDLITG-QAALEQISAGNTGVFSG 205

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: A0A7S3IA89_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3IA89_9SPIT)

HSP 1 Score: 155 bits (391), Expect = 6.120e-45
Identity = 80/156 (51.28%), Postives = 105/156 (67.31%), Query Frame = 0

Query:    2 AASDMVGASAPLGFFDPMGFSKGPAERLNA-YREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMP 156
            A  DMVGA  PLGFFDP+GFSK  +    A +REAELKHGR AMLA  G +T + +HPLY+G LSSNP+ AI +VP  GL QI++FIGF+E        +P Y PGD++G++   + E     W+ YQL+EL+NGR AM    G++TH ++TG  P
Sbjct:   16 AKLDMVGACKPLGFFDPLGFSKDASPASMAKFREAELKHGRVAMLACAGMITADKFHPLYDGKLSSNPLLAIAQVPKLGLLQILLFIGFMEVFGILNSRRPDYKPGDFLGSSQWDTTE----VWDNYQLRELNNGRLAMFASIGMLTHAYITGKGP 167

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: A0A7S0XDX8_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDX8_9STRA)

HSP 1 Score: 153 bits (386), Expect = 5.010e-44
Identity = 86/158 (54.43%), Postives = 105/158 (66.46%), Query Frame = 0

Query:    5 DMVGASAPLGFFDPMGFSKGPA-ERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQI 161
            ++VGASAPLGFFDP GFSKG + E L  YRE+ELKHGR AMLAV+G+LTQE +HP Y G LS NP+ A  EVPP G  QI+ FIG LEYI   I  K  Y  GD++G   L   +    +W + Q +EL+NGR AM  I G +TH  +TG   A EQ+
Sbjct:   37 ELVGASAPLGFFDPFGFSKGVSDETLFKYRESELKHGRVAMLAVLGWLTQERFHPFYEGKLSGNPLVAFGEVPPLGFVQIIAFIGLLEYI-GTIQNK--YQSGDFLGIKPLIDNQ-DDSRWVSIQTRELNNGRLAMFAILGEITHAAITG-KGALEQL 189

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: A0A7S3TFW5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TFW5_EMIHU)

HSP 1 Score: 151 bits (381), Expect = 4.840e-43
Identity = 82/171 (47.95%), Postives = 112/171 (65.50%), Query Frame = 0

Query:    1 MAASDMVGASAPLGFFDPMGFSKGPA-ERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRGVYSGGI 170
            +  + MVG   PLG+FDP+GFSK  + E +  +REAELKHGR AMLA  G +T + +HPL+ G LSSNP+ AIT+VP  GL QI++FIGF+E        +P Y PG+++G +    E  P   W+ YQL+EL+NGR AM G  G++TH ++TG  P  E +  G  +GGI
Sbjct:   44 LKVNGMVGDCKPLGYFDPLGFSKDASPETMAKFREAELKHGRVAMLACAGMITADKFHPLFGGKLSSNPLLAITQVPKLGLLQILLFIGFMEVFGILNSRRPDYEPGNFLGTSQW--ETTP--TWDAYQLRELNNGRLAMFGAIGMLTHAYITGKGP-LELLDAG--NGGI 207

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: A0A7S3AG67_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG67_9EUKA)

HSP 1 Score: 149 bits (377), Expect = 1.890e-42
Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 0

Query:    5 DMVGASAPLGFFDPMGFSKGPA-ERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRGVYSGGI 170
            DMVG+SAPLGFFDP+GFSK  + E +  +REAELKHGR AMLAV G +T + +HPL+ G  SSNP+ A+T+VP  G  QI+ FI F+E I      +P Y PG+++G +    +      W++YQ KEL+NGR AM    G++TH ++TG  P  E +  G   GG+
Sbjct:   47 DMVGSSAPLGFFDPLGFSKDASPETMKKFREAELKHGRVAMLAVFGMITADKFHPLFGGQCSSNPLLALTQVPKLGWLQILTFIMFMEVIGILNSRRPDYEPGNFLGTSQWEMDA----TWDSYQTKELNNGRLAMFASIGMLTHAYITGKGP-LELLDAG--GGGV 206

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: Q2IA68_ISOGA (Chloroplast light harvesting protein isoform 11 n=1 Tax=Isochrysis galbana TaxID=37099 RepID=Q2IA68_ISOGA)

HSP 1 Score: 146 bits (368), Expect = 3.050e-41
Identity = 79/153 (51.63%), Postives = 104/153 (67.97%), Query Frame = 0

Query:    6 MVGASAPLGFFDPMGFSK--GPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMP 156
            MVG SAPLGFFDP GFSK   PA  +  +REAELKHGR AMLA  G +T + +HPLY+G LSSNP+ AI++VP  GL QIV+FIGF+E        +P Y PG+++G+     E G    W+ +Q++EL+NGR AM    G++TH+ +TG  P
Sbjct:   38 MVGDSAPLGFFDPFGFSKEASPAS-MAKFREAELKHGRVAMLASAGMITADKFHPLYDGKLSSNPLLAISQVPKLGLLQIVLFIGFMEVFGILNSRRPDYQPGNFLGSAQW--ETGA--SWDDFQVRELNNGRLAMFASIGMLTHSSITGKGP 185

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: A0A7S0E1K9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E1K9_9EUKA)

HSP 1 Score: 145 bits (367), Expect = 3.840e-41
Identity = 73/157 (46.50%), Postives = 103/157 (65.61%), Query Frame = 0

Query:    1 MAASDMVGASAPLGFFDPMGFSKGPA-ERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMP 156
            M    ++G  APL +FDP+GFSK  + E +  YREAELKHGR AMLA  G +TQ+ WHPL++G LS+NP+ AI + P  G+ QI++FI F+E I      +  Y PG+++G++   + E     WE YQLKEL+NGR AM G  G++  +++TG  P
Sbjct:   29 MKVGGLIGDCAPLAYFDPLGFSKDASPETMKKYREAELKHGRVAMLAAWGMITQDAWHPLFDGKLSANPLLAIIQTPKLGVIQILIFIAFIEVIGILNTRRADYEPGNFLGSSQWETGE----TWENYQLKELNNGRLAMFGSIGMLVGSYITGKGP 181

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: A0A7S4B2U4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2U4_CHRCT)

HSP 1 Score: 146 bits (368), Expect = 4.190e-41
Identity = 75/153 (49.02%), Postives = 101/153 (66.01%), Query Frame = 0

Query:    6 MVGASAPLGFFDPMGFSK--GPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAKPGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMP 156
            +VG SAPLGFFDP+G++K   PA+ L  YRE ELKHGR AMLA +G +  + WHPLY GG S+NP+ AIT+VP  GL QI+ FIGF+E +    + +  Y PG+++G+    + E     W+ YQ +EL+NGR AM    G++ H  LTG  P
Sbjct:   55 LVGDSAPLGFFDPLGYTKKASPAD-LKKYRECELKHGRVAMLASMGMVVADFWHPLYGGGNSANPLVAITQVPKAGLLQILAFIGFMEVMGQLNMQRADYEPGNFLGSGQWETSE----SWDDYQTRELNNGRLAMFASIGMLAHAALTGKGP 202

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BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Match: A0A0G4GBS7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GBS7_VITBC)

HSP 1 Score: 145 bits (366), Expect = 8.120e-40
Identity = 80/174 (45.98%), Postives = 107/174 (61.49%), Query Frame = 0

Query:    6 MVGASAPLGFFDPMGFSKGPA-ERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAK-----PGY--IPGDYVGA----NDLFSEEGPHG--------------QWETYQLKELHNGRAAMMGITGLVTHNFLTG 153
            ++G+SAPLGFFDP+GF+K  + + +   RE ELKHGR AM AV+G++TQ  +HPLY G LS++P+KAITEVP  G+ Q++ FIGF EY+   +V K     PG   +PGDY+G      D+ S     G              QW  YQ +EL+NGR AMM I GL+  + L G
Sbjct:   99 LIGSSAPLGFFDPLGFTKNKSTQEIARLRECELKHGRLAMFAVLGWMTQTVFHPLYGGKLSADPLKAITEVPAPGIIQLLFFIGFFEYVTMNLVKKYQRETPGRMDLPGDYLGTYGWYQDIVSTRRADGIDDFPVTDSGVTPEQWVGYQTRELNNGRLAMMAIVGLIVQDVLFG 272

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig7.15055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8V9_ECTSI	6.820e-122	98.83	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
I2CPJ1_NANGC	8.470e-49	52.30	Protein fucoxanthin chlorophyll a c protein n=1 Ta...	[more]
A0A7S3IA89_9SPIT	6.120e-45	51.28	Hypothetical protein (Fragment) n=1 Tax=Favella eh...	[more]
A0A7S0XDX8_9STRA	5.010e-44	54.43	Hypothetical protein n=2 Tax=Chromulina nebulosa T...	[more]
A0A7S3TFW5_EMIHU	4.840e-43	47.95	Hypothetical protein n=1 Tax=Emiliania huxleyi Tax...	[more]
A0A7S3AG67_9EUKA	1.890e-42	47.90	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
Q2IA68_ISOGA	3.050e-41	51.63	Chloroplast light harvesting protein isoform 11 n=...	[more]
A0A7S0E1K9_9EUKA	3.840e-41	46.50	Hypothetical protein n=1 Tax=Phaeocystis antarctic...	[more]
A0A7S4B2U4_CHRCT	4.190e-41	49.02	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A0G4GBS7_VITBC	8.120e-40	45.98	Uncharacterized protein n=1 Tax=Vitrella brassicaf...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 6..149 e-value: 1.1E-30 score: 107.3
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 2..167 e-value: 1.4E-26 score: 95.5
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 9..157
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 3..153
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 9..157

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig7	contig	E-siliculosus-1a_M_contig7:634262..637816 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig7.15055.1	mRNA_E-siliculosus-1a_M_contig7.15055.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig7 632985..638205 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15055.1 ID=prot_E-siliculosus-1a_M_contig7.15055.1|Name=mRNA_E-siliculosus-1a_M_contig7.15055.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=172bp
MAASDMVGASAPLGFFDPMGFSKGPAERLNAYREAELKHGRTAMLAVVGF
LTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYIISQIVAK
PGYIPGDYVGANDLFSEEGPHGQWETYQLKELHNGRAAMMGITGLVTHNF
LTGGMPAFEQISRGVYSGGIH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind