prot_E-siliculosus-1a_M_contig7.15053.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15053.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15053.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length147
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 4.650e-94
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query:    1 MMMAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146
            MMMAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL
Sbjct:    1 MMMAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.670e-60
Identity = 99/144 (68.75%), Postives = 117/144 (81.25%), Query Frame = 0
Query:    3 MAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146
            +AVS A  EE ++  DVP L+  V++A +EALDIRVGRIV AE +PDPDHGNKPSRKYLSLVV LGNE R ++S VR + DVE+AIGK+VL+ AN EEE ILG PSRG+LL  +N+SK PMPRTLRTVLLGGG VPPGS V+GL
Sbjct:   16 VAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 158 bits (400), Expect = 2.350e-46
Identity = 82/144 (56.94%), Postives = 111/144 (77.08%), Query Frame = 0
Query:    3 MAVSHAAAEEISNME--DVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVS 144
            MA    A +E  N++  D+P +KD V+ A  ++LDIRVGRI  A+LIPDP+H  KPSRKYL L+V++G EKR +V+A R I DVE++IG++VL+A NVE++T+LG+ S G+LLS SN ++ P+PRTLRTVL  GGG+PPGS VS
Sbjct:   61 MAFVKGAVDEEDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 100 bits (250), Expect = 1.340e-23
Identity = 60/148 (40.54%), Postives = 88/148 (59.46%), Query Frame = 0
Query:    6 SHAAAEEISNMED---VPKLKDPVAIADFEALDIRVGRIVLAELIPDPD---HGNKP--SRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSG 145
            +H    E+    D    P +K  V  + FE++D+RVG I  A+ + D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VL+ ANV    + G+ S G +L+G N+   PMPR+ + +L G G +PPGS V G
Sbjct:   72 AHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 97.8 bits (242), Expect = 1.940e-22
Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = 0
Query:    6 SHAAAEEISNMED---VPKLKDPVAIADFEALDIRVGRIVLAELIPDPD---HGNKP--SRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGS 141
            +H    E+    D    P +K  V  + FE++D+RVG I  A+ + D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VL+ ANV    + G+ S G +L+G N+   PMPR+ + +L G G +PPGS
Sbjct:   44 AHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGS 187          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: A0A1F8JXF2_9BACT (Methionine--tRNA ligase n=1 Tax=Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 TaxID=1797606 RepID=A0A1F8JXF2_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 2.370e-13
Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   15 NMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSN 117
            N++   KLK+ +   DF  LD+RVG+I+ AE +       + S K L + VD+G EKR++VS++      ED IGK V++ AN++   ++G+ S+G +L+  N
Sbjct:  559 NLKSFEKLKEEITYEDFSKLDLRVGKIISAEKV-------EKSNKLLKITVDIGFEKRQIVSSIAKTFKPEDLIGKKVIIVANLKTAKLMGIDSQGMILAAGN 654          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: UPI001AE5ECDA (methionine--tRNA ligase n=1 Tax=Methanolinea mesophila TaxID=547055 RepID=UPI001AE5ECDA)

HSP 1 Score: 74.7 bits (182), Expect = 8.130e-13
Identity = 42/108 (38.89%), Postives = 67/108 (62.04%), Query Frame = 0
Query:   20 PKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTL 127
            PK+++ ++I DF  +DIR+G+I+ AE IP        S+K L L+VDLG EKR++VS +      ED +G+ V + AN+   TI G+ SRG +L+  + +   +P T+
Sbjct:  556 PKMEE-ISIEDFCRMDIRIGKILKAEPIPK-------SKKLLRLIVDLGQEKRQIVSGIAQFYTPEDLVGQQVAVLANLAPATIFGVESRGMILAAGDTASLLVPLTV 655          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: A0A1G8X7N8_9EURY (Methionine--tRNA ligase n=1 Tax=Methanoculleus thermophilus TaxID=2200 RepID=A0A1G8X7N8_9EURY)

HSP 1 Score: 73.9 bits (180), Expect = 1.510e-12
Identity = 45/108 (41.67%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   11 EEISNMEDVPKLKDP-VAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSN 117
            E +   ++  K K P V+I +F  LDIRVG+IV AE I       K S+K   L+VDLG+EKR+VVS +      E+ +GK V M AN+    I G+ SRG +L+  +
Sbjct:  546 ERVEKAKEAAKPKTPTVSIDEFAKLDIRVGQIVSAEPI-------KGSKKLYKLIVDLGSEKRQVVSGIAQFYSPEELVGKDVAMIANLAPAKIFGVESRGMILAAGD 646          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: T0M350_9ARCH (Methionyl-tRNA synthetase n=1 Tax=Thermoplasmatales archaeon A-plasma TaxID=667135 RepID=T0M350_9ARCH)

HSP 1 Score: 68.9 bits (167), Expect = 2.330e-12
Identity = 32/94 (34.04%), Postives = 57/94 (60.64%), Query Frame = 0
Query:   21 KLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLS 114
            ++ + + I DF  ++ R GR+V  E +P        SR  L +VVDLG EKR+++S++      E+ +GK +++  N+++ T +GL S+G LL+
Sbjct:    3 RVSEEIGIEDFRKIEFRTGRVVECEKVPR-------SRSLLRIVVDLGEEKRQIISSISEFYSPEEMVGKTIVVVTNLKKATFMGLESQGMLLA 89          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Match: A0A7W1RGU4_9BACT (Methionine--tRNA ligase subunit beta n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1RGU4_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 2.500e-12
Identity = 45/115 (39.13%), Postives = 70/115 (60.87%), Query Frame = 0
Query:   11 EEISNMEDVPK----LKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKE 121
            E+ S++  VP     LK+ V I D + LD+RVG ++ AE +P        S+K L L +DLG E R VVS +      E+ IGK V++ AN++  T++G+ S+G +L+GS +SK+
Sbjct:  173 EQKSDLPAVPASYTPLKETVNIGDVQRLDLRVGTVMTAEPVPK-------SKKLLKLQIDLGFELRTVVSGISQNYKPEEIIGKKVVVVANLQPATLMGIQSQGMILAGS-WSKD 279          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W1_ECTSI4.650e-94100.00tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A836CNH0_9STRA1.670e-6068.75tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0MGA1_9CRYP2.350e-4656.94Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2K1L6P8_PHYPA1.340e-2340.54tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA1.940e-2240.28Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1F8JXF2_9BACT2.370e-1336.89Methionine--tRNA ligase n=1 Tax=Chlamydiae bacteri... [more]
UPI001AE5ECDA8.130e-1338.89methionine--tRNA ligase n=1 Tax=Methanolinea mesop... [more]
A0A1G8X7N8_9EURY1.510e-1241.67Methionine--tRNA ligase n=1 Tax=Methanoculleus the... [more]
T0M350_9ARCH2.330e-1234.04Methionyl-tRNA synthetase n=1 Tax=Thermoplasmatale... [more]
A0A7W1RGU4_9BACT2.500e-1239.13Methionine--tRNA ligase subunit beta n=1 Tax=Parac... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 20..142
e-value: 3.2E-20
score: 74.1
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 19..143
NoneNo IPR availablePANTHERPTHR11586:SF35coord: 19..143
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 36..119
e-value: 3.1E-7
score: 30.4
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 30..144
score: 17.986
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 26..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:621927..623713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15053.1mRNA_E-siliculosus-1a_M_contig7.15053.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 621927..623713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15053.1 ID=prot_E-siliculosus-1a_M_contig7.15053.1|Name=mRNA_E-siliculosus-1a_M_contig7.15053.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=147bp
MMMAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDP
DHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEE
ETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR002547tRNA-bd_dom