prot_E-siliculosus-1a_M_contig7.15044.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15044.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15044.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length2192
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI)

HSP 1 Score: 2400 bits (6221), Expect = 0.000e+0
Identity = 1639/1930 (84.92%), Postives = 1656/1930 (85.80%), Query Frame = 0
Query:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSATXXXXXXXXXXXXXXXXXXXX--ASGYYLELAGTFPLAGNITALAVIPVATSTXXXXXXXXXXXXXXXXXXDILVVSFGVAKMALVAYDSVLGRLETLSIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISCSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDSVSTRESDSEGEEDRGLGNGAVAKGDGGSGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLDCPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTGRTAAAAAAGGSRPLGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAASGGRXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPKAEXXXXXXXXXVGQAEGAPAARSSSTTGESAVGEQGETXXXXXXXXXXXXXXXXXXXXXVTEGGGER------LAGMQVDANVGSEDGSAAMSTRSPGGDGKKVAGDGDAGGKPSEITETSDDGAEVAEGPGAVASPPVDNGNDGSPDPQAATPTKQEATEASSSSPQPGDGEEAREGKEAGSRGGSAKRVRAERPSSGGDVGAGDNDGQPDKKKSRVAACADGEDDAASSGEAVPATAETTATAXXAVDGAPAGTTVGGEEGAEALGNGVAAPAVSSESGRPAAADDAVDATPXXXXXXXXXXXXXXXXXXXXXXXQLYGARIGASASEAAGGSGGEAALARLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTAKLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGGEVGGGAMGGNKRDTLVLVSCSASPPAXXGAATAGGDTRPGHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAHEQGLRVTRNRDPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSVEEAGEEGEGGGGVWEEVEAVCMFGVQKGGPVGEQSPERCEEEGLSAQKGWWGGSAWGEAGGSGSEPAAPGDGGEEAGSWNGEARVEHVSAYVVVCRRGGTVEVFSCEGEGPEETRARPVFRATGAALAPPTLWNELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVASPLAAFGGREQANPPPPPCPTRQVVCFSKLCHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVADKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAEPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEGEGGRSGGRGQDGSVPGSEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQAGAPRMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE 1922
            MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHS  XXXXXXXXXXXXXXXXXXXX  ASGYYLELAGTFPLAGNITALAVIP                       DILVVSFGVAKMALVAYDSVLGRLET+SIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTIS SDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEA+ XXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXX  SVS RESDSEGEED GLGNGA AKGDGG+GGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALL+CPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTT   AAA AAG SRP GGAAFGTPNRVVGQSMRPVGRASPCSVLAVA     XXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPKAEXXXXXXXXX                           XXXXXXXXXXXXXXXXXXXXX              LAGMQVDANVGS DGSAAMSTRSPGGDGKKVAGD DA GKPSEITETS  GAE+A+GPGAV SPP++NGNDGSPDP AATPTKQEA EA SSSPQP DGEEA EGK+AGSRGGSAKR RAERPSSGGDVGAGDNDGQPDKK+SRV+ACADGEDDAASSGEAVPAT ETTATA  AV GAPA T VGGEEGAEALG+GVAAP VSSESGRPAAAD A+D TPXXXXXXXXXXXXXXXXXXXXXXXQLYGARIGASASE A GSGGEAALARLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKT KLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEG                           XX      GDTR GHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAH+QGLRVTRNRDPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSVEEAGEEGEGGGGVWEEVEAVCMFGVQKGG VGEQSPER EEEGL AQKGWWGGSAWGEAGGSGSEP APGD GEEAGS NGEARVEHV AYVVVCRRGGTVEVFSCEGEG EETRARPVFRATGAALAPPTLWNELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                XXXXXXXXXXX       VVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMV SPLAAFGGREQ            VVCFSKL HDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVA+KVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVA+PKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGA S XXXXXXXXXXXXXXXXXXXXXXXX  PEEGEG RSGGRGQDGSVPG+EAEALMLSAAVVESHPMDSDENGVCMTLVRLEQ GAPRMYVAVGTGMNEPQGEDKAARGRLIL EVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE
Sbjct:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXASGYYLELAGTFPLAGNITALAVIP-----------------------DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXXAAGAGESAAGGVAXXXXXXXXXXXXXXXXX--SVSARESDSEGEEDGGLGNGATAKGDGGAGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAADAAGCSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVA----XXXXXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPGGKGAAVPKREPKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTLAGMQVDANVGSGDGSAAMSTRSPGGDGKKVAGDADADGKPSEITETSGGGAEIADGPGAVTSPPIENGNDGSPDPPAATPTKQEA-EALSSSPQPDDGEEAGEGKDAGSRGGSAKRGRAERPSSGGDVGAGDNDGQPDKKRSRVSACADGEDDAASSGEAVPATEETTATAAAAVGGAPASTAVGGEEGAEALGDGVAAPTVSSESGRPAAADAAIDPTPXXXXXXXXXXXXXXXXXXXXXXXQLYGARIGASASEGADGSGGEAALARLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTTKLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTRAGHTRVLAFEEDAKVVELPEGDGNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNRDPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSVEEAGEEGEGGGGVWEEVEAVCMFGVQKGGSVGEQSPERYEEEGLPAQKGWWGGSAWGEAGGSGSEPTAPGDDGEEAGSSNGEARVEHVRAYVVVCRRGGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVATGIILANGRRGAAGRGGGKKVDGEANGAGTAAPSSDPMEVDDGATAPDSAAVDASASGEAPSAPDETVEKAGADAGXXXXXXXXXXXS------VVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSPLAAFGGREQ------------VVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAVSAXXXXXXXXXXXXXXXXXXXXXXXXT-PEEGEGRRSGGRGQDGSVPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILLEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE 1880          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI)

HSP 1 Score: 497 bits (1280), Expect = 2.580e-158
Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 0
Query: 1947 NRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 2191
            +RWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF
Sbjct:   11 SRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: A0A835Z873_9STRA (Cleavage/polyadenylation specificity factor, A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z873_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.090e-68
Identity = 118/268 (44.03%), Postives = 174/268 (64.93%), Query Frame = 0
Query: 1923 SGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDID 2186
            +GPV AVAQ+ R++  +    + +  WDPK+ +L  +G ++   YV+++SV+K  F+++GD   SVQ ++WR+ED S+  L+KD+E  QV++  +L+D+P + IVV D   N+K+L+YAP    SRGG +L+C +DF++G+ VG    +R R N  +  R+    G LDG +  + P++ER FRRLYALQG+M NAL H    NPR  RLF               + +LDG+LLWRFV L A+ Q +LTRAIGTTVD V+ +LLD+D
Sbjct:    3 AGPVGAVAQISRYVATAAAASITILEWDPKSDSLRPVGIYEASQYVVTMSVVK-TFLVLGDVMNSVQFLMWRDEDRSINQLAKDYEPTQVYATVFLVDQPSLGIVVGDSSGNIKILRYAPQLLASRGGHRLVCDADFHIGAPVGAFGPQRLRNNKLNAPRFGAAVGGLDGSVALLAPLEERAFRRLYALQGVMCNALEHGAGVNPRGARLFRSQLPAAAAAEGGRMKGVLDGALLWRFVSLPAQVQCELTRAIGTTVDAVLLSLLDVD 269          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: A0A2D4CF34_PYTIN (CPSF_A domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF34_PYTIN)

HSP 1 Score: 220 bits (561), Expect = 1.770e-59
Identity = 127/348 (36.49%), Postives = 197/348 (56.61%), Query Frame = 0
Query: 1863 YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGAR---------------YCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFR---------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDI 2185
            YV +GTG   P GED++ +GRL+L+E+DYA     +G+    + KLR +F KE         G +S V+QLG H++ +VG K+IV  ++ K+  L    F+D ++Y++SLSVIK  +++  D Y SV  + WRE+   L  L+KD+E   + + E+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG ++  + R+ T  +    A+               Y  L G+ +G +GA++ V ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K+  LDG +L+RF+ LD   Q +L R IGTT + ++ NLL++
Sbjct:   29 YVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTTAEGETSAKLPKLRLIFIKEH------HHGAISFVSQLGPHVLAAVGMKLIV--YEFKSDQLTACAFYDAQMYIVSLSVIKD-YVMYADVYKSVHFLRWREKQRQLQLLAKDYEPLAITATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNPREFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNLLEV 367          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: A0A7S1BI36_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BI36_9STRA)

HSP 1 Score: 219 bits (558), Expect = 3.240e-57
Identity = 142/396 (35.86%), Postives = 213/396 (53.79%), Query Frame = 0
Query: 1834 VVESHPMDSDENGVCMTLVRL--EQAGAPRM------YVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAVKLRQVFAKE-QLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGA--------------------------RYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASL 2190
            V++ H +   E+G+ + ++ L  E  G   M      +V VGTG+ +  GED  ++GR++LFEV      +E+      + L   ++K+  LGPV+   G  +        L++  G +V V +W  K   L  IGF   ++ V  +++ K  F+L+ DAY S+  +VWRE D SLT L+KD+E   V++A ++   P M  V  D R N++  QYAP    SRGG KL+C++D++LG++   L     R +L  G+                          R+ +  GT+DGG GAV PV+ER FRRLYALQG++ NAL  +GA N R +RLF      G     E ++ +LDG LL R+  L    Q ++ RAIGTTVD +M NLL++D A +
Sbjct:  156 VLDKHALGEYEHGMSLNVLPLTTEAEGKTGMQTNSTLFVVVGTGIVDQDGEDIGSKGRVLLFEVKKP---KENVNAASPLSLSLTYSKDILLGPVTVLEGLKTGNQT---RLVIGAGAEVTVEQW--KDQQLTQIGFFHAQMQVQGVTMFK-TFMLLSDAYDSIHFLVWRESDKSLTLLAKDYEPTCVYAAGFINRGPTMYFVCHDDRENLQFFQYAPTDPASRGGNKLVCRADYHLGTQTTHLRTHLVRNSLLLGSATPATSWIALRHRDAMALRQEDPDCRRFGVHFGTVDGGFGAVFPVNERTFRRLYALQGVVGNALQQSGALNVRGWRLFQRTTQRGACRSGERQKGVLDGGLLMRYCQLGYFQQEEIARAIGTTVDMIMDNLLELDCARM 542          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: A0A5D6Z0P8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Z0P8_9STRA)

HSP 1 Score: 228 bits (582), Expect = 3.170e-56
Identity = 133/348 (38.22%), Postives = 202/348 (58.05%), Query Frame = 0
Query: 1855 EQAGAPRMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIG--FHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDG-ARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLF---DHGPTFRYET------KQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLAS 2189
            E A   R YV VGTG   P GED++ RGRL+L+E+DYA      G     + KLR +F K+         G +S VAQLG ++I +VG K+IV  +  +    +LIG  F+D +++++S+S++K  F++ GD Y S   + W+E+   L  L+KD+E   V + E+ + E  +A++  D   N+ V+QYAPN   SRGG +LL   DF+LG +V  + R+R    +R     Y  + G+ +G + A++PV ERVFRRL+ LQ +M N L  N A NPR +R      H  + R +       K++ LD  +L+RF+ LD   Q ++TR IGTT + V+ NLL++  A+
Sbjct: 1467 EWAKKKRPYVVVGTGYVGPHGEDESGRGRLLLYELDYAQYVNHSGSTSGKLPKLRLIFVKDH------RQGAISMVAQLGPYVIAAVGSKLIVYEFKSE----QLIGCAFYDAQMFIVSISIVKD-FVMYGDVYKSAHFLRWKEKQRQLVLLAKDYEPLAVSTTEFNLFEKRLALLAVDVEENLHVMQYAPNDIESRGGQRLLRTGDFHLGVQVSSMFRKRITPAIRSAPVAYVNILGSSEGSISALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRAMKANSHRHSGRPDAWSKQKWKKSFLDAQVLFRFLQLDYVAQKEITRCIGTTPEVVVHNLLEVQRAT 1803          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: A0A833S4Z4_PHYIN (CPSF A subunit region n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S4Z4_PHYIN)

HSP 1 Score: 228 bits (580), Expect = 4.770e-56
Identity = 139/353 (39.38%), Postives = 203/353 (57.51%), Query Frame = 0
Query: 1861 RMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV--KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIG--FHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRR----------TRG-NLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLAS 2189
            R Y+ VGTG   P GED++ RGRL+L+E+DYA    E+G        KLR VF KE         G +S V+QLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+++LSV+K  F++ GD Y SV  + WRE    L  L+KD+E   V + E+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V  + R+R          T G N    + Y  + GT +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct: 1315 RPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1656          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: D0NYE8_PHYIT (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0NYE8_PHYIT)

HSP 1 Score: 228 bits (580), Expect = 5.170e-56
Identity = 139/353 (39.38%), Postives = 203/353 (57.51%), Query Frame = 0
Query: 1861 RMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV--KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIG--FHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRR----------TRG-NLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLAS 2189
            R Y+ VGTG   P GED++ RGRL+L+E+DYA    E+G        KLR VF KE         G +S V+QLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+++LSV+K  F++ GD Y SV  + WRE    L  L+KD+E   V + E+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V  + R+R          T G N    + Y  + GT +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct: 1399 RPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1740          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: A0A0P1AL14_PLAHL (Cleavage and polyadenylation specificity factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AL14_PLAHL)

HSP 1 Score: 227 bits (579), Expect = 6.850e-56
Identity = 138/350 (39.43%), Postives = 204/350 (58.29%), Query Frame = 0
Query: 1861 RMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV--KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIG--FHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRG-----NLRDGAR---YCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLAS 2189
            R YV +GTG   P GED++ RGRL+L+E+DYA    E+G        KLR VF KE         G +SAVAQLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+++L+VIK  FI+ GD Y SV  + WRE    L  L+KD+E   V + E+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V  + R++        N ++GA    Y  + GT +GG+ A++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L++F+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1414 RPYVVIGTGCVGPHGEDESGRGRLLLYELDYAQYVNEEGGTTSGKLPKLRLVFIKEH------RQGAISAVAQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLNVIKD-FIMYGDVYKSVHFLRWREMQRQLLLLAKDYEPLAVSATEFSVYEKRLALLAVDMDENMHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKQVDAVVSGTNRQEGAFPLCYVNILGTSEGGVSALVPVSERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAELRCGRSDGWSKKKWKKSFLDALVLFQFLQLDYVAQKELARCIGTTPEVVIHNLLEVQHAT 1752          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Match: A0A662X1P8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1P8_9STRA)

HSP 1 Score: 227 bits (578), Expect = 9.200e-56
Identity = 136/352 (38.64%), Postives = 206/352 (58.52%), Query Frame = 0
Query: 1861 RMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGKHEHAV--KLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWDPKTCTLELIG--FHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRT-------RGNLRDGAR---YCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFR---------YETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLAS 2189
            R Y+ +GTG   P GED++ RGRL+L+E+DYA   +E+G        KLR VF KE         G +S VAQLG +++ +VG K+IV  +  +    +LIG  F+D +++++SLSV++  F++ GD + SV  + W+E+   LT L+KD+E   V + E+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V  + R+R        R N R  A    Y  + G  +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R         ++ K++ LD  +L+RF+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1440 RPYLVIGTGCVGPHGEDESGRGRLLLYELDYAQYVKEEGGTTSGKLPKLRLVFIKEH------RQGAISMVAQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMFIVSLSVVRD-FVMYGDVFKSVHFLRWKEKQRQLTLLAKDYEPLAVSTTEFNVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQVASMFRKRVDTGGQMVRTNGRASAPPGYYVNVLGNSEGGVGALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKHKWKKSFLDAFVLFRFLRLDYVAQKELARCIGTTPEVVIHNLLEVQRAT 1780          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W8_ECTSI0.000e+084.92Cleavage and polyadenylation specificity factor CG... [more]
D7G8W9_ECTSI2.580e-15899.59CPSF_A domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z873_9STRA1.090e-6844.03Cleavage/polyadenylation specificity factor, A sub... [more]
A0A2D4CF34_PYTIN1.770e-5936.49CPSF_A domain-containing protein n=1 Tax=Pythium i... [more]
A0A7S1BI36_9STRA3.240e-5735.86Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A5D6Z0P8_9STRA3.170e-5638.22Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A833S4Z4_PHYIN4.770e-5639.38CPSF A subunit region n=2 Tax=Phytophthora infesta... [more]
D0NYE8_PHYIT5.170e-5639.38Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
A0A0P1AL14_PLAHL6.850e-5639.43Cleavage and polyadenylation specificity factor n=... [more]
A0A662X1P8_9STRA9.200e-5638.64Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 305..555
e-value: 1.1E-12
score: 49.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1785..2098
e-value: 2.3E-51
score: 177.0
IPR004871Cleavage/polyadenylation specificity factor, A subunit, C-terminalPFAMPF03178CPSF_Acoord: 1833..2156
e-value: 1.2E-55
score: 189.1
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 1832..2169
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 946..1344
coord: 9..617
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 1832..2169
coord: 946..1344
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 9..617

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:483997..505009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15044.1mRNA_E-siliculosus-1a_M_contig7.15044.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 482539..505009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15044.1 ID=prot_E-siliculosus-1a_M_contig7.15044.1|Name=mRNA_E-siliculosus-1a_M_contig7.15044.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=2192bp
MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHR
DDHSATAAAAAAARETSNGDERDDDDASGYYLELAGTFPLAGNITALAVI
PVATSTSSTTTQQQQQQQQMQQQQDILVVSFGVAKMALVAYDSVLGRLET
LSIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISCSDPAGRCLAAVVA
GCQLVVLPARRHVPGSVFVSEEARRRQRRVLRLRRRAAVAARRNNGAGAG
ESATGGAAGGVDDGSDDDDDDDDDGDDSVSTRESDSEGEEDRGLGNGAVA
KGDGGSGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPI
QTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSP
IGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLDCPLRGGDSDW
GWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYA
LRLHLTTGRTAAAAAAGGSRPLGGAAFGTPNRVVGQSMRPVGRASPCSVL
AVAASGGRSGGSGGGGGSGASKGLVFMGSRVGDSLLVDYSVASAGTRPGG
KGAAVPKREPKAEEEGEEEEEDVGQAEGAPAARSSSTTGESAVGEQGETS
SGGATAAAPAAGGGATVKEEVTEGGGERLAGMQVDANVGSEDGSAAMSTR
SPGGDGKKVAGDGDAGGKPSEITETSDDGAEVAEGPGAVASPPVDNGNDG
SPDPQAATPTKQEATEASSSSPQPGDGEEAREGKEAGSRGGSAKRVRAER
PSSGGDVGAGDNDGQPDKKKSRVAACADGEDDAASSGEAVPATAETTATA
AAAVDGAPAGTTVGGEEGAEALGNGVAAPAVSSESGRPAAADDAVDATPP
PPTTAPAVPLSKEEQEMIEEEEQLYGARIGASASEAAGGSGGEAALARLG
SKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTAKLAGGGG
GNRSRGGHGGRGSGPNGTAAAAAAAAAGGGTSGGGIRTSLVCAAGYGGQG
SLAVFSAGLRTEVVVELSVPGATGVYSSSEGGEVGGGAMGGNKRDTLVLV
SCSASPPAAAGAATAGGDTRPGHTRVLAFEEDAKVVELPEGDGNPFVCDA
ATADVCSMAGGTVVQAHEQGLRVTRNRDPVQDVLASEDPDLGGLGADAGV
TVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSVEEAGEEGEGGGGV
WEEVEAVCMFGVQKGGPVGEQSPERCEEEGLSAQKGWWGGSAWGEAGGSG
SEPAAPGDGGEEAGSWNGEARVEHVSAYVVVCRRGGTVEVFSCEGEGPEE
TRARPVFRATGAALAPPTLWNELLLPPAVAAAAVASDDDDEEEGSSLANG
GGRESGGDRSPMEDDDVLEEEAAGLAVATGVILANGRRGAAGRGGGKKAD
GEANGAGAAAPSSDPMEVDDGATAPDSAAAAASASGEAPPAPDGTVEKAG
ADAGGAKAAAAAAAAAAEEEDGVVCPAVTDVIVHPVGAVGGPPELRRLVL
AMHLDNGSLLVYEARMVASPLAAFGGREQANPPPPPCPTRQVVCFSKLCH
DLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGH
FVADKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTME
DALVAEPKSGLKEGEEGEQGDGDDDEEEEAAGLLDRHTVKHKNWTVADPS
LGGAPPLLVPRFELRVLALAPGAASAAAATSSSSAARSASSANDKSVGGG
GAPEEGEGGRSGGRGQDGSVPGSEAEALMLSAAVVESHPMDSDENGVCMT
LVRLEQAGAPRMYVAVGTGMNEPQGEDKAARGRLILFEVDYAYLAREDGK
HEHAVKLRQVFAKEQLGPVSGESGPVSAVAQLGRHLILSVGKKVIVNRWD
PKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSL
TALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGG
TKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPV
DERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDG
SLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004871Cleavage/polyA-sp_fac_asu_C
IPR015943WD40/YVTN_repeat-like_dom_sf