prot_E-siliculosus-1a_M_contig7.15040.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig7.15040.1
Unique Name	prot_E-siliculosus-1a_M_contig7.15040.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	417

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig7.15040.1 vs. uniprot
Match: D7G8X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X3_ECTSI)

HSP 1 Score: 582 bits (1501), Expect = 8.590e-200
Identity = 311/414 (75.12%), Postives = 320/414 (77.29%), Query Frame = 0

Query:    1 NLGPEDLAIAAPAA-----GDLNNQSASMDAVDPIFALVAVNPLLAAVVLPVYFALSVWSTHRVVYFLLTWSATQTAKRCDRWAQECEATAASSWWQRRVVPLIFPSQTHRSRFCRDVGKFEACPKYVQELRLIATPVTAGGDATPTPARAFSSISNEHHSGKGEPHRCSVFLGTIRRGTARAWREFRAAAKRVGAVAKCAWSETSKKVYSPVLKKTGTERKVGGSGCSVVGGHSPAQPRKTASHEDRVLAARRALRGSDTTGAVRLAFGLNTVFFVVAGLRFYLRKSRGGRLRSREWHRRWRWXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTVRNSPLQSRDSVASTTRRLRAREPCLAWGDWDDASLKIFLAEEARTSRHPVKWLRQVEEFYHRAALPTLARQWNVPFLSK 409
            +LGPEDLAIAAPAA     GDLNN SASMDAVDPIFAL AVNPLLAAVVLPVYFALSVWSTHRVVYFLLTWSATQTAKRCDRWAQECEAT ASSWWQRRVVP IFPSQ HRSRFCRDV KFEACPKYVQELRLIATP TAGGDATPTPARAFSSI+NEHH+GKG+ HRCSVFLGTIR+GTARAWRE RAAAKRVGAVAKCAWSET +KVY  VLKKTG ERKVGGS CSVVGGHSPAQPRK  S EDRVLAA+R LRGSDTT AVRLAFGLNT                                                                 PLQSRDSVAS + RLRAREPCLAW DWDD SLK+FLAEEARTSRHPVKW RQVEEFYHRAALPTLARQWNVPFLSK
Sbjct:    2 HLGPEDLAIAAPAAFFPLFGDLNNPSASMDAVDPIFALAAVNPLLAAVVLPVYFALSVWSTHRVVYFLLTWSATQTAKRCDRWAQECEATPASSWWQRRVVPFIFPSQKHRSRFCRDVEKFEACPKYVQELRLIATPATAGGDATPTPARAFSSITNEHHNGKGDSHRCSVFLGTIRKGTARAWREIRAAAKRVGAVAKCAWSETREKVYFAVLKKTGIERKVGGSSCSVVGGHSPAQPRKAPSDEDRVLAAQRTLRGSDTTSAVRLAFGLNT-----------------------------------------------------------------PLQSRDSVASPSWRLRAREPCLAWRDWDDLSLKVFLAEEARTSRHPVKWRRQVEEFYHRAALPTLARQWNVPFLSK 350

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig7.15040.1 vs. uniprot
Match: A0A6H5JLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB3_9PHAE)

HSP 1 Score: 512 bits (1318), Expect = 5.100e-169
Identity = 277/397 (69.77%), Postives = 284/397 (71.54%), Query Frame = 0

Query:   13 AAGDLNNQSASMDAVDPIFALVAVNPLLAAVVLPVYFALSVWSTHRVVYFLLTWSATQTAKRCDRWAQECEATAASSWWQRRVVPLIFPSQTHRSRFCRDVGKFEACPKYVQELRLIATPVTAGGDATPTPARAFSSISNEHHSGKGEPHRCSVFLGTIRRGTARAWREFRAAAKRVGAVAKCAWSETSKKVYSPVLKKTGTERKVGGSGCSVVGGHSPAQPRKTASHEDRVLAARRALRGSDTTGAVRLAFGLNTVFFVVAGLRFYLRKSRGGRLRSREWHRRWRWXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTVRNSPLQSRDSVASTTRRLRAREPCLAWGDWDDASLKIFLAEEARTSRHPVKWLRQVEEFYHRAALPTLARQWNVPFLSK 409
            AAGDLNN   SMD VDPIFALVAVNPLLAAV LPVYFALSVWSTHRV +FLLTWSATQTAKRCDRW QECE T ASSWWQRRVVPLIFPSQTHRSRFCRD  KFEACPKYVQELRLIA P   GGDATPTPARAFSSI+NEHHSGKGE HRCSVFLGTIRRG ARAWRE RAAAK VGAVAKCAWSE  +K YS VLKKTGT+RKVGGS CSVVGGHSPAQPR   S  DRVLAARRALRGSDTTGAVRLAFGLNTVFFVVAGL                                                                     RRLRAR+PCLAWGDWDDASLK F+ EE             V+EFYHRAALPTLARQWNVPFLSK
Sbjct:   25 AAGDLNNPPTSMDTVDPIFALVAVNPLLAAVALPVYFALSVWSTHRVFHFLLTWSATQTAKRCDRWVQECEGTLASSWWQRRVVPLIFPSQTHRSRFCRDADKFEACPKYVQELRLIAAPAIPGGDATPTPARAFSSITNEHHSGKGEHHRCSVFLGTIRRGAARAWREVRAAAKHVGAVAKCAWSERREKAYSAVLKKTGTKRKVGGSSCSVVGGHSPAQPRTAPSQVDRVLAARRALRGSDTTGAVRLAFGLNTVFFVVAGL---------------------------------------------------------------------RRLRARKPCLAWGDWDDASLKSFMEEE-------------VDEFYHRAALPTLARQWNVPFLSK 339

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig7.15040.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig7.15040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G8X3_ECTSI	8.590e-200	75.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JLB3_9PHAE	5.100e-169	69.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 52..257
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 258..280
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 281..416
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..51
None	No IPR available	TMHMM	TMhelix		coord: 30..52
None	No IPR available	TMHMM	TMhelix		coord: 258..280

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig7	contig	E-siliculosus-1a_M_contig7:423278..426528 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig7.15040.1	mRNA_E-siliculosus-1a_M_contig7.15040.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig7 423278..426528 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15040.1 ID=prot_E-siliculosus-1a_M_contig7.15040.1|Name=mRNA_E-siliculosus-1a_M_contig7.15040.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=417bp
NLGPEDLAIAAPAAGDLNNQSASMDAVDPIFALVAVNPLLAAVVLPVYFA
LSVWSTHRVVYFLLTWSATQTAKRCDRWAQECEATAASSWWQRRVVPLIF
PSQTHRSRFCRDVGKFEACPKYVQELRLIATPVTAGGDATPTPARAFSSI
SNEHHSGKGEPHRCSVFLGTIRRGTARAWREFRAAAKRVGAVAKCAWSET
SKKVYSPVLKKTGTERKVGGSGCSVVGGHSPAQPRKTASHEDRVLAARRA
LRGSDTTGAVRLAFGLNTVFFVVAGLRFYLRKSRGGRLRSREWHRRWRWW
QQRGNGGNRRGAVVHGDADNNNSSSSGSTVRNSPLQSRDSVASTTRRLRA
REPCLAWGDWDDASLKIFLAEEARTSRHPVKWLRQVEEFYHRAALPTLAR
QWNVPFLSKVSGSVDA*