prot_E-siliculosus-1a_M_contig7.15029.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15029.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15029.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length256
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15029.1 vs. uniprot
Match: D7G8Y1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y1_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 3.510e-135
Identity = 194/203 (95.57%), Postives = 199/203 (98.03%), Query Frame = 0 
Query:    1 MHVERLEVADLQQAARASWEDRFKDEHPEFLNANLWQREAIETRINAQDGFLFLIGLFVVLMLENMWSFDPSTFTSETTLDVFLALLVFGASCGVFAIFSMTMVRLKLQRLMVRDIAALKVQQVTGRANRSLLDGLLARWKASSAQRQFQPACVSYDWYHGGGMNTSSFPTKILSKDWNPSCPCSLIKYAVLAFAATVFCSMA 203
            MHVERLEVADLQQAARASWEDRFKD+HPEFLNANLWQREAIETRINAQDGFLFLIGLFVVLMLENMWSFDPSTFTSET LD FLALLVFGASCGVFAIFSMTMVRLKLQRLMVRDIAALKVQQVTGRANRSLLDGLLARWKASSAQRQFQPAC+SYDWYHGGGMNTSSFPTKILSK+WNPSCP SL+K+AVLAFAATV CSMA
Sbjct:    1 MHVERLEVADLQQAARASWEDRFKDKHPEFLNANLWQREAIETRINAQDGFLFLIGLFVVLMLENMWSFDPSTFTSETRLDAFLALLVFGASCGVFAIFSMTMVRLKLQRLMVRDIAALKVQQVTGRANRSLLDGLLARWKASSAQRQFQPACISYDWYHGGGMNTSSFPTKILSKNWNPSCPRSLVKFAVLAFAATVLCSMA 203
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Y1_ECTSI3.510e-13595.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 210..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 237..255
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..236
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 50..67
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 191..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:321697..327381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15029.1mRNA_E-siliculosus-1a_M_contig7.15029.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 320916..327496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15029.1 ID=prot_E-siliculosus-1a_M_contig7.15029.1|Name=mRNA_E-siliculosus-1a_M_contig7.15029.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=256bp
MHVERLEVADLQQAARASWEDRFKDEHPEFLNANLWQREAIETRINAQDG
FLFLIGLFVVLMLENMWSFDPSTFTSETTLDVFLALLVFGASCGVFAIFS
MTMVRLKLQRLMVRDIAALKVQQVTGRANRSLLDGLLARWKASSAQRQFQ
PACVSYDWYHGGGMNTSSFPTKILSKDWNPSCPCSLIKYAVLAFAATVFC
SMAALAISLADTRGLAWSLCSSALLGAAALLPMVFVRASTNAPGGSSQES
PFLGF*
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