prot_E-siliculosus-1a_M_contig7.15015.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15015.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15015.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length239
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: D7FL93_ECTSI (Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL93_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 3.780e-85
Identity = 130/140 (92.86%), Postives = 131/140 (93.57%), Query Frame = 0
Query:   99 MLRTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKLAEA 238
            MLRTAGRAIHQ CRQRVPQASTP CVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFK    Q+   MSGADANLLEQNVAKLAEA
Sbjct:    1 MLRTAGRAIHQHCRQRVPQASTPPCVRHFSAGGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKGG--QEIDSMSGADANLLEQNVAKLAEA 138          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: A0A836CF79_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF79_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.730e-24
Identity = 60/121 (49.59%), Postives = 76/121 (62.81%), Query Frame = 0
Query:  122 LCVRHFSA---GGGDRLVELSTKDDYVNFPREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHM----SGADANLLEQNVAKL 235
            + V+H S    G G  + EL++ DDY +  ++K+VLYFTAKWCPPCRRI P   +L+ E   V F KVDID N+ AA+ A I SVPTF F+K        HM    +GAD  LLE+NV KL
Sbjct:   36 VLVKHLSGAAGGSGGTVKELASMDDYQSSSKDKAVLYFTAKWCPPCRRIAPMYQDLAAEKSDVHFYKVDIDVNKAAAKDAGIMSVPTFIFYKNG------HMVSKFAGADYELLEENVDKL 150          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: W4H7J0_9STRA (Thioredoxin n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7J0_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.550e-22
Identity = 56/127 (44.09%), Postives = 75/127 (59.06%), Query Frame = 0
Query:  113 QRVPQASTPLCVRHFSAGGGDRLV-ELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKL 235
            +R   A++   V  FS+ GG  LV EL+   +Y      P  KSV+YFTA WC PC+ I P  A LS +   +SF KVD+D+ +  A +A ++S+PTF+F+   K QQ    SGAD  LLE NV KL
Sbjct:   20 RRFAAATSRASVARFSSRGGASLVKELAEHAEYEQLIARPDAKSVVYFTAAWCGPCKMISPIYANLSNKNEDISFVKVDVDELDHTAHVAGVRSMPTFQFYANGKLQQSLGFSGADPTLLESNVNKL 146          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: A0A024U468_9STRA (Thioredoxin n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U468_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.770e-22
Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 0
Query:  118 ASTPLCVRHFSAGGGDRLV-ELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKL 235
            A++ + +  FS+  G  LV EL+   +Y      P  KSV+YFTA WC PC+ I P  AELS     VSF KVD+D+ +  A +A ++S+PTF+F+   + Q+    SGAD NLL Q+VAKL
Sbjct:   11 ATSRVSIASFSSRAGASLVKELTEHAEYEQLIARPDAKSVVYFTASWCGPCKMISPVYAELSNMNTDVSFAKVDVDEMDHTAHVAGVRSMPTFQFYSNGQLQKSLGFSGADPNLLAQSVAKL 132          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: A0A067CR67_SAPPC (Thioredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CR67_SAPPC)

HSP 1 Score: 90.5 bits (223), Expect = 2.150e-19
Identity = 50/116 (43.10%), Postives = 66/116 (56.90%), Query Frame = 0
Query:  122 LCVRHFSAGGGDRLVELSTKDDYVNFPRE--KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKL 235
            L  R FS G   R+  L +   Y +   +  KSV+YFTA WC PC+ I P  A+LS E P V F KVD+D+ +E A  A ++++PTF F+   K QQ    +GAD   L  NV KL
Sbjct:   16 LGARAFSRGVASRVQVLDSDSQYTDLIAKPSKSVVYFTAAWCGPCKMISPIYAQLSNEFPDVEFAKVDVDELDETAAKAGVRAMPTFHFYANGKLQQPLGFAGADPKQLLANVQKL 131          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: A0A1E7F829_9STRA (Thioredoxin domain-containing protein n=3 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F829_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.650e-19
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 0
Query:  150 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKL 235
            EKS+LYFTA WCPPC+ I P    LS+E P +SFGK+DIDDN+++A    I SVPTF FF    +++    SGAD   L++ +  L
Sbjct:   53 EKSILYFTATWCPPCKLIKPVYESLSDEYPNISFGKIDIDDNQDSAMEYEISSVPTFLFFNGKGEKKYGQFSGADQEQLKKTLDDL 138          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: A0A8K1CHK9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHK9_PYTOL)

HSP 1 Score: 90.1 bits (222), Expect = 2.930e-19
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 0
Query:  124 VRHFSAGGGDRLVELSTKDDYVNFPR----EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKLAE 237
             R F+     R+  L   D Y         +K+++YFTAKWCPPC+ I P   ELS +  ++ F KVD+D+  E    A ++S+PTF FF   + Q+Q   SGAD NLL +++ +L+E
Sbjct:   15 TRGFAGSALSRVKILGDHDAYKKITATGTGQKAIVYFTAKWCPPCKMISPIYDELSAKYQSIEFAKVDVDELAETTSRAGVRSMPTFYFFSDGELQRQLSFSGADENLLREHLQELSE 132          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: A0A485LRV6_9STRA (Aste57867_23259 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRV6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.140e-18
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 0
Query:  124 VRHFSAGGGDRLVELSTKDDYVNF---PREKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKLAE 237
             R  +     R+ EL++ ++Y      P  KSV+YFTA+WC PC+ I P  A+LS     V+F KVD+DD +  A  A ++S+PTF+F+   K Q     SGAD NLL+  V KL +
Sbjct:   16 ARFSTRAAASRVKELTSHEEYEKLIANPDAKSVVYFTAQWCGPCKMISPIYAQLSNAHKDVNFVKVDVDDLDTTAHAAGVRSMPTFQFYVNGKIQPTLGFSGADPNLLQVTVNKLKQ 132          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: A0A2D4BPQ5_PYTIN (Thioredoxin domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPQ5_PYTIN)

HSP 1 Score: 88.2 bits (217), Expect = 1.480e-18
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0
Query:  150 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKLAE 237
            +K+V+YFTAKW PPC+ I P   ELS +   + F KVD+D+  E    A ++S+PTF FF   K Q+Q   SGAD NLL +N+ +L E
Sbjct:   42 KKAVVYFTAKWXPPCKVISPIFDELSAQFDGIQFAKVDVDEQSETTSRAGVRSMPTFFFFDDGKLQRQLSFSGADENLLRENINELNE 129          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Match: X1A998_9ZZZZ (Thioredoxin domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1A998_9ZZZZ)

HSP 1 Score: 87.4 bits (215), Expect = 1.610e-18
Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 0
Query:  150 EKSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHIKSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKLAEA 238
            +KS+LYFTA WCPPC+ I P    +++E P V+FGKVDIDDN EAA    I  VPTF  F  SK       +GAD N LE+ V  L ++
Sbjct:   21 DKSILYFTATWCPPCKMIKPIYENMAKENPEVAFGKVDIDDNAEAAAKYEISGVPTFILF--SKDDVHGRFTGADQNQLEKLVGDLKDS 107          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL93_ECTSI3.780e-8592.86Thioredoxin O n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A836CF79_9STRA1.730e-2449.59Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
W4H7J0_9STRA3.550e-2244.09Thioredoxin n=1 Tax=Aphanomyces astaci TaxID=11209... [more]
A0A024U468_9STRA6.770e-2244.26Thioredoxin n=1 Tax=Aphanomyces invadans TaxID=157... [more]
A0A067CR67_SAPPC2.150e-1943.10Thioredoxin domain-containing protein n=2 Tax=Sapr... [more]
A0A1E7F829_9STRA2.650e-1950.00Thioredoxin domain-containing protein n=3 Tax=Frag... [more]
A0A8K1CHK9_PYTOL2.930e-1938.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LRV6_9STRA1.140e-1841.03Aste57867_23259 protein n=1 Tax=Aphanomyces stella... [more]
A0A2D4BPQ5_PYTIN1.480e-1847.73Thioredoxin domain-containing protein n=1 Tax=Pyth... [more]
X1A998_9ZZZZ1.610e-1850.56Thioredoxin domain-containing protein n=1 Tax=mari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 144..231
e-value: 3.2E-19
score: 68.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 116..237
score: 11.059
NoneNo IPR availableGENE3D3.40.30.10coord: 135..238
e-value: 4.3E-24
score: 86.4
NoneNo IPR availablePANTHERPTHR10438:SF405THIOREDOXIN-3-RELATEDcoord: 136..235
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 136..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 50..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 38..49
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 153..171
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 133..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:110846..115040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15015.1mRNA_E-siliculosus-1a_M_contig7.15015.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 110846..115266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15015.1 ID=prot_E-siliculosus-1a_M_contig7.15015.1|Name=mRNA_E-siliculosus-1a_M_contig7.15015.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=239bp
MTRGRQSRANRRQHPRRGTRAAEQILKSSRFRSVRTRTPLFSAVGPLLLH
NRAANDTTRVTHPSQRERQREGEDRGRGTHERGWCIRTAIRGGQFEKTML
RTAGRAIHQQCRQRVPQASTPLCVRHFSAGGGDRLVELSTKDDYVNFPRE
KSVLYFTAKWCPPCRRIGPFLAELSEETPAVSFGKVDIDDNEEAAQMAHI
KSVPTFKFFKASKQQQQQHMSGADANLLEQNVAKLAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR017937Thioredoxin_CS
IPR013766Thioredoxin_domain