prot_E-siliculosus-1a_M_contig7.15006.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15006.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15006.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length285
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig7.15006.1 vs. uniprot
Match: Q8QNQ3_ESV1K (EsV-1-6 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ3_ESV1K)

HSP 1 Score: 465 bits (1196), Expect = 6.960e-164
Identity = 232/285 (81.40%), Postives = 251/285 (88.07%), Query Frame = 0 
Query:    1 MNNDINYCAYGCPAGKQCPPAASDSCAIGTPRLQNQGTPLCCEVDDDTVYLRTIRAIHQAPSYNNDAAVVAFKQRLGAMLAFLDIPNQDDGSLFNGVLTLDLVINGNVPACTLQRTTDLMRLMARVFPVCLVDLCAETFVGLPPELRNNHKIFYSVHAAEYHRDRALPSLSHGNYTFWYDTPVSAAQFFSLVLLTLQRQPNLAQRRSQISLECTWNNDGSRIRRRQMKLLIRLMRTSSFLGKIIASKSIAGG-PLFEAGIPLQTTTVAEGRTITCGADTLTIEIV 284
            MNNDI+YCAYGCPAGK+CPPAASDSCAIGTPRLQNQGTPLCCEV+DD VYLRT+RAIHQAPS+ NDA VVAFKQRLG MLAFLDIPNQ  GSL++G++TL+LVINGN PACTLQR TDLMRLM RV  V LV+LCAE FVGLPPELRNN KI Y VHAAEY+RD+ALPSLSHGNYTFWYDTPVSA QFFSLVL TL RQ  L QRRSQISL C WNNDGSRIRRRQM L++R +RTS+FLGKIIASK I G  PLFEA IPLQTTTVAEGRT+T   DTLTIEI+
Sbjct:    1 MNNDIDYCAYGCPAGKRCPPAASDSCAIGTPRLQNQGTPLCCEVEDDAVYLRTVRAIHQAPSHYNDAEVVAFKQRLGVMLAFLDIPNQGGGSLYDGIVTLNLVINGNTPACTLQRATDLMRLMVRVRRVSLVELCAEIFVGLPPELRNNDKIIYHVHAAEYYRDQALPSLSHGNYTFWYDTPVSAFQFFSLVLRTLDRQTGLVQRRSQISLVCNWNNDGSRIRRRQMNLILRHVRTSTFLGKIIASKPIVGNTPLFEADIPLQTTTVAEGRTVTSSVDTLTIEII 285
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNQ3_ESV1K6.960e-16481.40EsV-1-6 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:14539..15393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15006.1mRNA_E-siliculosus-1a_M_contig7.15006.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 14539..15393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15006.1 ID=prot_E-siliculosus-1a_M_contig7.15006.1|Name=mRNA_E-siliculosus-1a_M_contig7.15006.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=285bp
MNNDINYCAYGCPAGKQCPPAASDSCAIGTPRLQNQGTPLCCEVDDDTVY
LRTIRAIHQAPSYNNDAAVVAFKQRLGAMLAFLDIPNQDDGSLFNGVLTL
DLVINGNVPACTLQRTTDLMRLMARVFPVCLVDLCAETFVGLPPELRNNH
KIFYSVHAAEYHRDRALPSLSHGNYTFWYDTPVSAAQFFSLVLLTLQRQP
NLAQRRSQISLECTWNNDGSRIRRRQMKLLIRLMRTSSFLGKIIASKSIA
GGPLFEAGIPLQTTTVAEGRTITCGADTLTIEIV*
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