prot_E-siliculosus-1a_M_contig7.15004.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15004.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15004.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length276
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15004.1 vs. uniprot
Match: Q8QNQ5_ESV1K (EsV-1-4 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ5_ESV1K)

HSP 1 Score: 389 bits (999), Expect = 3.730e-134
Identity = 205/275 (74.55%), Postives = 221/275 (80.36%), Query Frame = 0
Query:    1 LSKRSTFHKIILVVITKHNMDPLTARLMSRSGLSTAGRLPAHSTPIVKAGIGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVALETVQNGGPTKPLYDAMAKLEVAERDYFARRYFGGEKAIQKGWSCVKFNQKIEELIITAADELRMTGGSTTRTTQPGYHNAARLAAISASVASFTLRTMNNKWYAXXXXXXXXXXRKPSTFGTDLTIINDEIVKINTHLRIVLALPDSNTTKQASVTSIKASLRHAEICQRLARLVADDHCDLPDDL 275
            LSKRSTFH+I LVVIT H MDPLTARLMSRSGLS AGR PAHSTP+ KAGIGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVAL++VQNGGPT PLY AMAKLEVAERDYFARRYF G+KAI KGW+  KF QKIEELI TAA++L       T  TQPGYH +AR AAISA+ AS  L  MN+KWY            KPSTF TDLT +   I  I  HLR+VL LPDS+TTKQAS+TSIKASLRHAEICQRLARLV DD CDLPDD+
Sbjct:    6 LSKRSTFHEITLVVITMHKMDPLTARLMSRSGLSAAGRPPAHSTPMAKAGIGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVALKSVQNGGPTAPLYAAMAKLEVAERDYFARRYFDGDKAILKGWNAEKFKQKIEELINTAANKLTAITVPGTTNTQPGYHISARGAAISAANASSRLNNMNDKWY--FSIGGNRLPTKPSTFSTDLTALERAIKTIKNHLRVVLTLPDSDTTKQASLTSIKASLRHAEICQRLARLVEDDRCDLPDDV 278          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15004.1 vs. uniprot
Match: Q8QNP3_ESV1K (EsV-1-18 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP3_ESV1K)

HSP 1 Score: 177 bits (449), Expect = 2.480e-51
Identity = 118/268 (44.03%), Postives = 143/268 (53.36%), Query Frame = 0
Query:   20 MDPLTARLMSRSGLSTAGRLPAHSTPIVKAGIGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVALETVQNGGPTKP------------LYDAMAKLEVAERDYFARRYFGGEKAIQKGWSCVKFNQKIEELIITAADELRMTGGSTTRTTQPGYHNAARLAAISASVASFTLRTMNNKWYAXXXXXXXXXXRKPSTFGTDLTIINDEIVKINTHLRIVLALPDSNTTKQASVTSIKASLRHAEICQRLARLVADDHCDLPDDL 275
            MD LTARLMSR+GL                    NP  P LPPVHN+RM+YLKE FG AE  LHDAR+ALE +++   TKP            LYDAMAKL V ERDYFA RYFG +KA+ KGW+      + +EL     D+LR       R      H   + AA+  S A   L  MNN WY+               FG    +IN  + +I T+LR ++A   S T  Q  + +IK+ LR AEICQRLARLVA D  DLPDDL
Sbjct:    1 MDSLTARLMSRAGL--------------------NPVDPKLPPVHNMRMVYLKEQFGAAEEALHDARLALEDLRDVQETKPYDQTKVDAAANLLYDAMAKLAVKERDYFASRYFGRDKAVLKGWNV----DRKQELFAKFIDDLRNKASGRLRPNMFS-HMDVQNAAVYCSQACVALEQMNNLWYSGGVAIPSNRLTDTPDFGKRQRVINQRLGQIQTNLRSIMA---SGT--QRDIITIKSCLRDAEICQRLARLVASDRWDLPDDL 238          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15004.1 vs. uniprot
Match: Q8QNQ6_ESV1K (EsV-1-3 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ6_ESV1K)

HSP 1 Score: 160 bits (404), Expect = 1.130e-44
Identity = 116/260 (44.62%), Postives = 144/260 (55.38%), Query Frame = 0
Query:   20 MDPLTARLMSRSGLSTAGRLPAHSTPIVKAGIGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVAL---ETVQNGGPTKPLYDAMAKLEVAERDYFARRYFG-GEKAIQKGWSCVKFNQKIEELIITAADELRMTGGSTTRTTQPGYHNAARLAAISASVASFTLRTMNNKWYAXXXXXXXXXXRKPSTFGTDLTIINDEIVKINTHLRIVLALPDSNTTKQASVTSIKASLRHAEICQRLARLVADDHCDLPDDL 275
            MDPLTARLMSRSGLS AGR PAHSTP++KAGIGLNPSKPLLPPVHNLRMIYLKEP  DAE  LH ARVAL   ET  N    K LY AMAKL+  E  YFA RY G G+  I +GW    F+ K+ EL+  +   +R T            H  A  AA     A+  LR M+ +             +  + F    T I  +I  I     ++L   +  T     + S+  SL+ A+   RLA+LV D+  ++P D+
Sbjct:    1 MDPLTARLMSRSGLSAAGRPPAHSTPMIKAGIGLNPSKPLLPPVHNLRMIYLKEPLTDAEKDLHAARVALKLLETADNDVNRKALYKAMAKLQGKEAQYFATRYIGRGKPQILRGWKTHYFSVKVGELLHKSV--MRHTS----------THQDAIDAADGTYYAAEDLRDMDTE-------ALKPNPQPKAWFDAGRTDIETQIASIE---GVIL---NKTTMDVHDIASLNDSLQDAKNILRLAKLV-DNVREVPYDM 234          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15004.1 vs. uniprot
Match: Q8QNQ4_ESV1K (EsV-1-5 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ4_ESV1K)

HSP 1 Score: 85.1 bits (209), Expect = 1.430e-15
Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 0
Query:   51 IGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVALETVQNGGP---TKPLYDAMAKLEVAERDYFARRYFGGEKAIQKGW 131
            IG+NP+  LLPPVHN+ MI L+E   DAE  LH ARVAL+T++  G    T  LY AM KL+  E+ YFARRY    KA+ +GW
Sbjct:   10 IGINPANTLLPPVHNVGMIILREELTDAENDLHAARVALKTLEEAGASGDTSDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGW 93          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Q8QNQ5_ESV1K3.730e-13474.55EsV-1-4 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
Q8QNP3_ESV1K2.480e-5144.03EsV-1-18 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
Q8QNQ6_ESV1K1.130e-4444.62EsV-1-3 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
Q8QNQ4_ESV1K1.430e-1553.57EsV-1-5 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:12735..13562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15004.1mRNA_E-siliculosus-1a_M_contig7.15004.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 12735..13562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15004.1 ID=prot_E-siliculosus-1a_M_contig7.15004.1|Name=mRNA_E-siliculosus-1a_M_contig7.15004.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=276bp
LSKRSTFHKIILVVITKHNMDPLTARLMSRSGLSTAGRLPAHSTPIVKAG
IGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVALETVQNGGPTKP
LYDAMAKLEVAERDYFARRYFGGEKAIQKGWSCVKFNQKIEELIITAADE
LRMTGGSTTRTTQPGYHNAARLAAISASVASFTLRTMNNKWYAAAGGGGN
RQQRKPSTFGTDLTIINDEIVKINTHLRIVLALPDSNTTKQASVTSIKAS
LRHAEICQRLARLVADDHCDLPDDL*
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