prot_E-siliculosus-1a_M_contig7.15003.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15003.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15003.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length238
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15003.1 vs. uniprot
Match: Q8QNQ6_ESV1K (EsV-1-3 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ6_ESV1K)

HSP 1 Score: 346 bits (887), Expect = 2.070e-118
Identity = 181/239 (75.73%), Postives = 199/239 (83.26%), Query Frame = 0
Query:    1 MDPLAARLMSRSGLSTAGRLPAHSTPMVKAGIGLNPSKPLLPPVHNLRMIYLKEPLTDAEKDLHAARVALKALETTNDDATRKALYRAMAKLQGKESQYFATRYID--KPLVLRGWKTHYFSHKVNELYQKSGIRYSFPPSGAHQDAIDAAEMNFWATEGLWDMNTETLKPNPQPKAWFDAKRTDIETNIASIKRVIQNTKTMDADDVASMQASLDNAKIILRLAKLVDNVREVPYDLL 237
            MDPL ARLMSRSGLS AGR PAHSTPM+KAGIGLNPSKPLLPPVHNLRMIYLKEPLTDAEKDLHAARVALK LET ++D  RKALY+AMAKLQGKE+QYFATRYI   KP +LRGWKTHYFS KV EL  KS +R++      HQDAIDAA+  ++A E L DM+TE LKPNPQPKAWFDA RTDIET IASI+ VI N  TMD  D+AS+  SL +AK ILRLAKLVDNVREVPYD+L
Sbjct:    1 MDPLTARLMSRSGLSAAGRPPAHSTPMIKAGIGLNPSKPLLPPVHNLRMIYLKEPLTDAEKDLHAARVALKLLETADNDVNRKALYKAMAKLQGKEAQYFATRYIGRGKPQILRGWKTHYFSVKVGELLHKSVMRHT----STHQDAIDAADGTYYAAEDLRDMDTEALKPNPQPKAWFDAGRTDIETQIASIEGVILNKTTMDVHDIASLNDSLQDAKNILRLAKLVDNVREVPYDML 235          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15003.1 vs. uniprot
Match: Q8QNQ5_ESV1K (EsV-1-4 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ5_ESV1K)

HSP 1 Score: 171 bits (432), Expect = 7.170e-49
Identity = 117/256 (45.70%), Postives = 148/256 (57.81%), Query Frame = 0
Query:    1 MDPLAARLMSRSGLSTAGRLPAHSTPMVKAGIGLNPSKPLLPPVHNLRMIYLKEPLTDAEKDLHAARVALKALETTNDDATRKALYRAMAKLQGKESQYFATRYID-KPLVLRGWKTHYFSHKVNELYQKSGIRYSF--------PPSGAHQDAIDAAEMNFWATEGLWDMNTE---TLKPN--PQPKAWFDAKRTDIETNIASIKRVIQNTKTMDADD------VASMQASLDNAKIILRLAKLVDNVR-EVPYD 235
            MDPL ARLMSRSGLS AGR PAHSTPM KAGIGLNPSKPLLPPVHNLRMIYLKEP  DAE  LH ARVALK+++     A    LY AMAKL+  E  YFA RY D    +L+GW    F  K+ EL   +  + +            G H  A  AA     A+  L +MN +   ++  N  P   + F    T +E  I +IK  ++   T+   D      + S++ASL +A+I  RLA+LV++ R ++P D
Sbjct:   25 MDPLTARLMSRSGLSAAGRPPAHSTPMAKAGIGLNPSKPLLPPVHNLRMIYLKEPFGDAEIHLHDARVALKSVQNGGPTAP---LYAAMAKLEVAERDYFARRYFDGDKAILKGWNAEKFKQKIEELINTAANKLTAITVPGTTNTQPGYHISARGAAISAANASSRLNNMNDKWYFSIGGNRLPTKPSTFSTDLTALERAIKTIKNHLRVVLTLPDSDTTKQASLTSIKASLRHAEICQRLARLVEDDRCDLPDD 277          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15003.1 vs. uniprot
Match: Q8QNP3_ESV1K (EsV-1-18 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP3_ESV1K)

HSP 1 Score: 98.2 bits (243), Expect = 3.180e-21
Identity = 91/265 (34.34%), Postives = 128/265 (48.30%), Query Frame = 0
Query:    1 MDPLAARLMSRSGLSTAGRLPAHSTPMVKAGIGLNPSKPLLPPVHNLRMIYLKEPLTDAEKDLHAARVALKAL---------ETTNDDATRKALYRAMAKLQGKESQYFATRYIDKP-LVLRGW----KTHYFSHKVNELYQKSGIRYSFPPSGAHQDAIDAAEMNFWATEGLWDMN-----------TETLKPNP---QPKAWFDAKRTDIETNIASIKRVIQNTKTMDADDVASMQASLDNAKIILRLAKLVDNVR-EVPYDL 236
            MD L ARLMSR+GL                    NP  P LPPVHN+RM+YLKE    AE+ LH AR+AL+ L         + T  DA    LY AMAKL  KE  YFA+RY  +   VL+GW    K   F+  +++L  K+  R   P   +H D  +AA     A   L  MN           +  L   P   + +   + +   I+TN+ SI  +   T+     D+ ++++ L +A+I  RLA+LV + R ++P DL
Sbjct:    1 MDSLTARLMSRAGL--------------------NPVDPKLPPVHNMRMVYLKEQFGAAEEALHDARLALEDLRDVQETKPYDQTKVDAAANLLYDAMAKLAVKERDYFASRYFGRDKAVLKGWNVDRKQELFAKFIDDLRNKASGRLR-PNMFSHMDVQNAAVYCSQACVALEQMNNLWYSGGVAIPSNRLTDTPDFGKRQRVINQRLGQIQTNLRSI--MASGTQR----DIITIKSCLRDAEICQRLARLVASDRWDLPDDL 238          
BLAST of mRNA_E-siliculosus-1a_M_contig7.15003.1 vs. uniprot
Match: Q8QNQ4_ESV1K (EsV-1-5 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ4_ESV1K)

HSP 1 Score: 94.0 bits (232), Expect = 3.710e-19
Identity = 52/95 (54.74%), Postives = 59/95 (62.11%), Query Frame = 0
Query:   32 IGLNPSKPLLPPVHNLRMIYLKEPLTDAEKDLHAARVALKALETTNDDATRKALYRAMAKLQGKESQYFATRYID-KPLVLRGWKTHYFSHKVNE 125
            IG+NP+  LLPPVHN+ MI L+E LTDAE DLHAARVALK LE          LY AM KLQ KE  YFA RY+     VLRGW      +K  +
Sbjct:   10 IGINPANTLLPPVHNVGMIILREELTDAENDLHAARVALKTLEEAGASGDTSDLYTAMWKLQKKEQAYFARRYLQTNKAVLRGWHNQVSKYKFRK 104          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Q8QNQ6_ESV1K2.070e-11875.73EsV-1-3 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
Q8QNQ5_ESV1K7.170e-4945.70EsV-1-4 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
Q8QNP3_ESV1K3.180e-2134.34EsV-1-18 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
Q8QNQ4_ESV1K3.710e-1954.74EsV-1-5 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:11960..12673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15003.1mRNA_E-siliculosus-1a_M_contig7.15003.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 11960..12673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15003.1 ID=prot_E-siliculosus-1a_M_contig7.15003.1|Name=mRNA_E-siliculosus-1a_M_contig7.15003.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=238bp
MDPLAARLMSRSGLSTAGRLPAHSTPMVKAGIGLNPSKPLLPPVHNLRMI
YLKEPLTDAEKDLHAARVALKALETTNDDATRKALYRAMAKLQGKESQYF
ATRYIDKPLVLRGWKTHYFSHKVNELYQKSGIRYSFPPSGAHQDAIDAAE
MNFWATEGLWDMNTETLKPNPQPKAWFDAKRTDIETNIASIKRVIQNTKT
MDADDVASMQASLDNAKIILRLAKLVDNVREVPYDLL*
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