prot_E-siliculosus-1a_M_contig7.15001.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig7.15001.1
Unique Nameprot_E-siliculosus-1a_M_contig7.15001.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length1217
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig7.15001.1 vs. uniprot
Match: Q8QKU9_ESV1K (EsV-1-171 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKU9_ESV1K)

HSP 1 Score: 836 bits (2159), Expect = 2.250e-281
Identity = 687/1232 (55.76%), Postives = 807/1232 (65.50%), Query Frame = 0
Query:    1 MDTKVVLIVALVVAGAILYATTMRSDSTNKAPVRK-WVSEDEIALTANAIVGELDEEAMEALPSDLRPNTDGLPLADEEKTELFAILNSVTDSGVLGALGSASPLGASAMKSLVEEKTALEEDILRRHNRITFLEKQIASTSNNSSKQKLVQQMKSLKRLLDRNKSALENVTKKIQQLKVAHRGKEKK---PNHTSAKLTSLVSQAKRLKVEYSALRANHENLKKSAEKLKKRMAAKKILPQQASEQGLVIERKYRATTKAIDSVRKSGRMIEGKIRDEKRRIEAANKEALAKARETKRAREKEAAAKKLLQETEKXXXXKEAGVKRAALVLERQXXXXXXXXXXXERVAIAQKARNEKVSEADSARKQYEEVRAKKEATDLXXXXXXXXXXXXXXXXXXXXAEASLKAEYKKEKQLVDAXXXXXXXXXXXXXXXXXXXXKKMQTIKSKELREKFQDDIRRKAADAIIKRQKSFKKMEALALNRRRILREKQLRLQKKAQKVAADLRRKEQDIARREEMAKARAKEQAAXXXXXXXXXXXXXXXXXXXQQQARALKQKQLDIEREKEAEKARAAAALXXXXXXXXXXXXXXXKKRRAHMEARARLRKHEAEEXXXARKKQVAELEEGIEKISGMSSDSIDLSGLDKTVLLELKVFVEASGGHRILPAIVKMIQLKSKKEEGVDDSDD-------DDEGRPMT----QEEFMENVKRITGIIPDGHGSLIALDFQVLEELLVYAKTLTE-RLPEFAFEVEAMIFKKELIDIAKQNGVTITPGMSRQQVSWSSAETLGLDKIIEFLKSKPGFGKGWLKVVNVAHRSERARLVAEAEAAXXXXXXXXXXXLEAIERARVAQAKKDLAKAAAKLEKDRQELDTEIVEVDKAVSAEKQRVIAEHQKEVDGIEREHEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVAESKLXXXXXXXXXVENEQRAEAIEVVATIEAEISNTQXXXXXXXXXXXXXXXXXXXXXVLEETTRAHALKQQAVVEEAKALQEEIQKSTVSKIXXXXXXXXXXXXXXXXXXXXXXQDLIEAKEKVKEIEVEKVDLEGAVQTDLLEQQKHDVEDDKEIVDDTTIDDVVEHTVHPRASKEDSVTASRKNNINGSSFIKMSVPSDMSPGESDTVSIFLSKEAGQLLARYHDIHKKIEQDGSLEDVSAEDKKVLASAGAEFKRIREQYVQQRKEKVLARREQLTSRMTN 1216
            M+T+V+LIVALVVAGAIL     + + + + P +K + S +EI+LTAN I+GELDEEAMEALPSDL+PN DGL L DE+KTELFAILNSVTDSGVLGALGS+SPLGASA   LV+ K  +   I    NR+  L++++A T N  S+ KL  Q+KS +    RN  AL+ + KKI +LK   + K K       +SAKL SLVSQ +RL+V+Y AL  N   L  + + L++++ AKKI  + ASE    +ERKY+ATTK+IDS+RKSG MIEGKI  EKRRI A  K++L KAR+TKRA E E AAKKLLQE+EK     EAGVK+A  VL RQ           +++A AQK   EKVSEAD AR++YE V+ KK+AT L                   X                  XXXXXXXXXXXXXXXXXXXX                               ++ KKM A+A  R++   EK  RL+ K Q   A +RRKEQ+IAR EEM KA+A EQAAXXXXXXXXXXXXXXXXXXX           L +E +KEAEK  AAAAL               KKR  HMEARARLRKH+AEE   ARKK+VAELE+GIEKISGMSSDSIDLSGLDKTVLLELKVF+EAS GH ILPA++KMI+LKSK                  +E RPMT    +E+F +NV+RITGIIPDG GS++ALD +VLEELL Y+KTLT  RL  F+  VE +IF K+LI +AKQNGVTITPGM  +QV+WSSA  + L KI+EFL S+P F + WL VV V HR++  +LV E EAA           L+AIE+ARVAQA+KDLAKAAAKLE+DRQ+LDTEIV V+ AV+AEKQRVIAEHQK            XXXXXXXXXXXXXXXXXXXXXXXXX         ESKL  XXXXXXX                        XXXXXXXXXXXXXXXXXX   V                 EA AL+EEI+KST+SKI                      QDLIEAKEKV+EIEVEKVDLEG VQ D             EIV+DT+IDD+VE TVHPRASKED V  +RK N +GSSFIKM VPSDMSPGESD VSI LSKEAG+LLA+YHDI+KKI ++GSLE+VSAEDKKVLASAGAEFKRIR QYV+QRKEKVLAR EQLT RMT+
Sbjct:    2 MNTRVILIVALVVAGAILLTKHRKKNGSTEEPFQKQFSSRNEISLTANVIIGELDEEAMEALPSDLKPNIDGLTLTDEDKTELFAILNSVTDSGVLGALGSSSPLGASARTDLVKTKNQITRKIRLFENRMKLLKEKMAKTKNPRSRAKLAGQIKSAQSESSRNDFALKAIVKKINRLKAKGKDKTKTNVVAEESSAKLKSLVSQKERLRVKYFALLKNRRALMNNVKALERQIKAKKISSKNASEWKRNLERKYKATTKSIDSIRKSGIMIEGKISAEKRRIVAVKKQSLEKARQTKRAHETEVAAKKLLQESEKKSAVTEAGVKKAKSVLNRQVLEVKRRAQKAQKMARAQKEHAEKVSEADRARREYEVVQEKKKATALAKGKAALKHKKESLTREAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEAAKKMAAIAQKRQKRFLEKGRRLETKFQNDTAIIRRKEQEIARLEEMNKAKAVEQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALESQKEAEKIEAAAALEKAKRDVAAKKAHSAKKRHEHMEARARLRKHKAEEAEKARKKKVAELEQGIEKISGMSSDSIDLSGLDKTVLLELKVFIEASDGHHILPAVIKMIELKSKXXXXXXXXXXXXXXXXXQNEDRPMTPEQIREDFFKNVQRITGIIPDGPGSMVALDMEVLEELLAYSKTLTTGRLATFSKHVEEIIFSKKLITVAKQNGVTITPGMHARQVTWSSANIVSLGKILEFLNSEPRFAEEWLNVVQVVHRNKTVQLVLEREAAEEARAKKQAEELDAIEKARVAQAEKDLAKAAAKLEQDRQKLDTEIVRVNHAVTAEKQRVIAEHQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIQEVDAATESKLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARVXXXXXXXXXXXXXXXXXEANALKEEIEKSTISKIKEENTIAQEKLESAVETVEQEKQDLIEAKEKVQEIEVEKVDLEGTVQIDXXXXXXXXXXXXXEIVEDTSIDDIVEDTVHPRASKEDMVKTARKRNPDGSSFIKMGVPSDMSPGESDNVSILLSKEAGELLAQYHDIYKKIGENGSLENVSAEDKKVLASAGAEFKRIRGQYVEQRKEKVLARTEQLTLRMTD 1233          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig7.15001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QKU9_ESV1K2.250e-28155.76EsV-1-171 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 803..830
NoneNo IPR availableCOILSCoilCoilcoord: 517..626
NoneNo IPR availableCOILSCoilCoilcoord: 837..871
NoneNo IPR availableCOILSCoilCoilcoord: 272..313
NoneNo IPR availableCOILSCoilCoilcoord: 407..445
NoneNo IPR availableCOILSCoilCoilcoord: 966..993
NoneNo IPR availableCOILSCoilCoilcoord: 195..236
NoneNo IPR availableCOILSCoilCoilcoord: 873..955
NoneNo IPR availableCOILSCoilCoilcoord: 352..402
NoneNo IPR availableCOILSCoilCoilcoord: 1021..1069
NoneNo IPR availableCOILSCoilCoilcoord: 146..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..1216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig7contigE-siliculosus-1a_M_contig7:6011..9661 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig7.15001.1mRNA_E-siliculosus-1a_M_contig7.15001.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig7 6011..9661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig7.15001.1 ID=prot_E-siliculosus-1a_M_contig7.15001.1|Name=mRNA_E-siliculosus-1a_M_contig7.15001.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1217bp
MDTKVVLIVALVVAGAILYATTMRSDSTNKAPVRKWVSEDEIALTANAIV
GELDEEAMEALPSDLRPNTDGLPLADEEKTELFAILNSVTDSGVLGALGS
ASPLGASAMKSLVEEKTALEEDILRRHNRITFLEKQIASTSNNSSKQKLV
QQMKSLKRLLDRNKSALENVTKKIQQLKVAHRGKEKKPNHTSAKLTSLVS
QAKRLKVEYSALRANHENLKKSAEKLKKRMAAKKILPQQASEQGLVIERK
YRATTKAIDSVRKSGRMIEGKIRDEKRRIEAANKEALAKARETKRAREKE
AAAKKLLQETEKRAAAKEAGVKRAALVLERQALDAQRGALKAERVAIAQK
ARNEKVSEADSARKQYEEVRAKKEATDLAKKKNDLKRDQDRFRREVARAE
ASLKAEYKKEKQLVDAQKAVLKAAEAKLEKRLAQLLKKMQTIKSKELREK
FQDDIRRKAADAIIKRQKSFKKMEALALNRRRILREKQLRLQKKAQKVAA
DLRRKEQDIARREEMAKARAKEQAAKAAQVAADQKQRELDQAKRQQQARA
LKQKQLDIEREKEAEKARAAAALEKAKADVAAKKAEADKKRRAHMEARAR
LRKHEAEEAEKARKKQVAELEEGIEKISGMSSDSIDLSGLDKTVLLELKV
FVEASGGHRILPAIVKMIQLKSKKEEGVDDSDDDDEGRPMTQEEFMENVK
RITGIIPDGHGSLIALDFQVLEELLVYAKTLTERLPEFAFEVEAMIFKKE
LIDIAKQNGVTITPGMSRQQVSWSSAETLGLDKIIEFLKSKPGFGKGWLK
VVNVAHRSERARLVAEAEAAEEARVKKRAEALEAIERARVAQAKKDLAKA
AAKLEKDRQELDTEIVEVDKAVSAEKQRVIAEHQKEVDGIEREHEKEKQV
VVENIKQELDEVEEEIVVEAREQIEEVEHVAESKLEEMKQEQAEVENEQR
AEAIEVVATIEAEISNTQVQEVKEALKQNLEEQKISQARVLEETTRAHAL
KQQAVVEEAKALQEEIQKSTVSKIEEEKTVAQEKLDSAVETIEREKQDLI
EAKEKVKEIEVEKVDLEGAVQTDLLEQQKHDVEDDKEIVDDTTIDDVVEH
TVHPRASKEDSVTASRKNNINGSSFIKMSVPSDMSPGESDTVSIFLSKEA
GQLLARYHDIHKKIEQDGSLEDVSAEDKKVLASAGAEFKRIREQYVQQRK
EKVLARREQLTSRMTN*
back to top