prot_E-siliculosus-1a_M_contig69.14995.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig69.14995.1
Unique Nameprot_E-siliculosus-1a_M_contig69.14995.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length187
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: A0A6H5KZP7_9PHAE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP7_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 2.710e-126
Identity = 181/186 (97.31%), Postives = 182/186 (97.85%), Query Frame = 0
Query:    1 MAQSGEQTAPSLKGQVQDEAPATADIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPLRVPRDRSAL 186
            M QS EQTAPSLKGQVQD+APATADIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDG GKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRF AGQFVYADEDGIVVSDEPLRVPRDRSAL
Sbjct:    1 MEQSCEQTAPSLKGQVQDQAPATADIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGAGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFKAGQFVYADEDGIVVSDEPLRVPRDRSAL 186          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: D7FZC9_ECTSI (Regulator of ribonuclease activity A, RraA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC9_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 3.840e-93
Identity = 149/188 (79.26%), Postives = 154/188 (81.91%), Query Frame = 0
Query:    1 MAQSGEQTAPSLKGQVQDEAPATADIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGA--VRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPLRVPRDRSAL 186
            M QSGEQTAP LKGQVQDEAPATADIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWR     G    R  S +        ++     K  +K   EQGVPVEFGGLRF AGQFVYADEDGI+VSDEPLRVPRDRS L
Sbjct:   27 MEQSGEQTAPPLKGQVQDEAPATADIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWREKTPAGRDHQRRRSRLSPRSASYPSVARPWAKCRRKR--EQGVPVEFGGLRFKAGQFVYADEDGIIVSDEPLRVPRDRSGL 212          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: A0A836C6L7_9STRA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6L7_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.500e-64
Identity = 104/162 (64.20%), Postives = 121/162 (74.69%), Query Frame = 0
Query:   20 APATADIMDDYDGDVQVVTN-SFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPLRVP 180
            +PATADIMD + G VQV  +  FRDYGGV RF G + TV+C ENNPLVRQRLTKE G G+VLVVDGGGS R AL+GD LAAG +QNGW GVI++G +RDS+ I +LP G KA+GT P KS K  PGE  VPV F G+ F  G +VYADEDGIVVS   L +P
Sbjct:    9 SPATADIMDHFQGQVQVAPSIGFRDYGGVRRFSGGIATVRCRENNPLVRQRLTKEAGGGRVLVVDGGGSTRCALLGDMLAAGAVQNGWAGVIVHGCIRDSAAIAQLPLGVKAIGTNPTKSGKADPGEADVPVTFAGVVFTPGHWVYADEDGIVVSAIELALP 170          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: A0A8J4C4G4_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4C4G4_9CHLO)

HSP 1 Score: 181 bits (460), Expect = 1.000e-54
Identity = 94/165 (56.97%), Postives = 119/165 (72.12%), Query Frame = 0
Query:   23 TADIMDDYDGD---------VQVVT-NSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPL 177
            TAD+ D Y  D         VQ+VT N FRD+GG  RF G+  TVKC+ENNPLVR+ L +E G G+VLVVDGGGSLR AL+GD LA  G++NGW G+I+NG +RDS++I ++P G KALGT P KS K+ PG++ VPV FGG+  + G +VYAD DGI+VS E L
Sbjct:   46 TADLTDKYLPDPVDTICTRSVQIVTPNLFRDFGGKLRFSGQATTVKCYENNPLVRKAL-EEPGIGRVLVVDGGGSLRCALLGDMLAENGVKNGWSGIIVNGCIRDSADIARMPLGVKALGTHPLKSSKRDPGQRDVPVSFGGVTVSPGDWVYADGDGILVSKEEL 209          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: UPI00123A7C9D (ribonuclease E activity regulator RraA n=1 Tax=Corynebacterium tuscaniense TaxID=302449 RepID=UPI00123A7C9D)

HSP 1 Score: 179 bits (454), Expect = 1.930e-54
Identity = 86/156 (55.13%), Postives = 110/156 (70.51%), Query Frame = 0
Query:   22 ATADIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPL 177
            ATADI D +D DVQ     FR+YGG   FCG ++T+ CF++N LV++ L    G GKVLVVDG  S+  ALMGD +AA G++NGW GVIING +RDS+E+  + FGCKALGT PRKS K   GEQ + +  GG+ F  G +VYAD DG+VVS+ P+
Sbjct:    8 ATADIADIHDKDVQSCDIQFRNYGGKVEFCGEIQTISCFQDNGLVKKTLNSP-GEGKVLVVDGHASMHTALMGDMIAAAGVKNGWAGVIINGPIRDSAEVSTMDFGCKALGTNPRKSNKDGVGEQNIVLRLGGIEFVPGHYVYADSDGVVVSENPV 162          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: W7U9K1_9STRA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=4 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9K1_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.000e-54
Identity = 90/158 (56.96%), Postives = 115/158 (72.78%), Query Frame = 0
Query:   21 PATADIMDDYDGDVQVVT-NSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPL 177
            PATAD+ DD++  +QV   N+F  +G  S FCG + T+KCFENNPLVR  L+ E G G+VLVVDGGGSLRRAL GD +AA  ++NGW GV+I GA+RDS+ I  +P G KALGT P KS K+ PG++ V V F G+ F  G +VY+D DGI+VS+ PL
Sbjct:   65 PATADLCDDHEHRLQVADGNAFHSFGQHSSFCGEIVTIKCFENNPLVRATLS-EPGEGRVLVVDGGGSLRRALFGDNIAALAVKNGWAGVVIYGAIRDSAVINTMPLGVKALGTNPVKSAKQHPGDRNVVVTFAGVTFKPGHYVYSDSDGIIVSETPL 221          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: A0A4D9D5G4_9STRA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5G4_9STRA)

HSP 1 Score: 178 bits (451), Expect = 6.240e-54
Identity = 89/158 (56.33%), Postives = 114/158 (72.15%), Query Frame = 0
Query:   21 PATADIMDDYDGDVQVVT-NSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPL 177
            PATAD+ DD++  +QV   N+F  +G  S FCG + T+KCFENNPLVR  L+ E G  +VLVVDGGGSLRRAL GD +AA  ++NGW GV+I GA+RDS+ I  +P G KALGT P KS K+ PG++ V V F G+ F  G +VY+D DGI+VS+ PL
Sbjct:   10 PATADLCDDHEQRLQVADGNAFHSFGQHSSFCGEIVTIKCFENNPLVRATLS-EPGEARVLVVDGGGSLRRALFGDNIAALAVKNGWAGVVIYGAIRDSAIINTMPLGVKALGTNPVKSAKQHPGDKNVVVTFAGVTFKPGHYVYSDSDGIIVSETPL 166          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: A0A2S0WGK7_9CORY (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=9 Tax=Bacteria TaxID=2 RepID=A0A2S0WGK7_9CORY)

HSP 1 Score: 177 bits (450), Expect = 7.550e-54
Identity = 87/158 (55.06%), Postives = 111/158 (70.25%), Query Frame = 0
Query:   22 ATADIMDDYDGDVQVVT--NSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPL 177
            ATADI D Y    Q+ +    F +YGG + FCG + T+KCF++N LV++ L    G G+VLVVDG G L  ALMGD +A  G+ NGW GV+INGA+RDS+E+ K+PFGCKALGT PRKS K   GE  V V FGG+ F+ G F+YAD DG+VV+ EP+
Sbjct:    6 ATADIADLYGDQEQLASCDTQFTNYGGHTEFCGEIVTIKCFQDNGLVKKTLNSP-GNGRVLVVDGHGGLHTALMGDMIAQAGVDNGWAGVVINGAIRDSAEVAKMPFGCKALGTNPRKSNKDGAGEVNVQVSFGGVVFHPGHFLYADADGVVVTAEPI 162          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: A0A7Z9PWL5_9BACT (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PWL5_9BACT)

HSP 1 Score: 175 bits (444), Expect = 5.240e-53
Identity = 91/155 (58.71%), Postives = 112/155 (72.26%), Query Frame = 0
Query:   23 TADIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPL 177
            TAD+ DD+    +VV   FRDYGGV +F GR+ TVK FE+N LVR+ L +EDGTG VLVVDGGGSLR AL+GD+LA  G  NGW G+I+ GAVRDS+ + ++PFG KAL T PRKS K+  G+  + V FGG  F  G F+YAD DGI+VSD  L
Sbjct:    5 TADLWDDHGEHCRVVEPLFRDYGGVEKFWGRIRTVKVFEDNSLVRRTL-EEDGTGFVLVVDGGGSLRCALLGDRLAELGKSNGWTGIIVYGAVRDSAVLRQIPFGVKALNTNPRKSVKRNEGQSDIGVAFGGTDFEPGGFLYADADGILVSDRKL 158          
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Match: UPI0018CB4F8C (ribonuclease E activity regulator RraA n=1 Tax=Corynebacterium aquatimens TaxID=1190508 RepID=UPI0018CB4F8C)

HSP 1 Score: 176 bits (445), Expect = 5.750e-53
Identity = 82/153 (53.59%), Postives = 109/153 (71.24%), Query Frame = 0
Query:   25 DIMDDYDGDVQVVTNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFNAGQFVYADEDGIVVSDEPL 177
            DI DD++ DVQ     FR++GG + FCG + T+ CF++N LV++ L    G GKVLVVDG GSL  ALMGD +A  G++NGW GVIING +RDS+E+ K+ FGCKALGT PRKS K+  G+  + +  GG+ F  G +VYAD DGI+V+ EP+
Sbjct:   16 DIYDDFEDDVQSCDTQFRNFGGRTEFCGEIVTISCFQDNGLVKKTLNSP-GEGKVLVVDGHGSLHTALMGDMIAEAGVENGWAGVIINGPIRDSAEVAKMDFGCKALGTNPRKSAKEGAGKTDIVIRLGGIDFIPGHYVYADSDGIIVTPEPV 167          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig69.14995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZP7_9PHAE2.710e-12697.314-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
D7FZC9_ECTSI3.840e-9379.26Regulator of ribonuclease activity A, RraA n=1 Tax... [more]
A0A836C6L7_9STRA4.500e-6464.204-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A8J4C4G4_9CHLO1.000e-5456.974-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax... [more]
UPI00123A7C9D1.930e-5455.13ribonuclease E activity regulator RraA n=1 Tax=Cor... [more]
W7U9K1_9STRA3.000e-5456.964-hydroxy-4-methyl-2-oxoglutarate aldolase n=4 Tax... [more]
A0A4D9D5G4_9STRA6.240e-5456.334-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A2S0WGK7_9CORY7.550e-5455.064-hydroxy-4-methyl-2-oxoglutarate aldolase n=9 Tax... [more]
A0A7Z9PWL5_9BACT5.240e-5358.714-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
UPI0018CB4F8C5.750e-5353.59ribonuclease E activity regulator RraA n=1 Tax=Cor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinPFAMPF03737RraA-likecoord: 23..172
e-value: 2.5E-42
score: 144.6
IPR010203Regulator of ribonuclease activity ATIGRFAMTIGR01935TIGR01935coord: 23..173
e-value: 1.0E-55
score: 185.7
NoneNo IPR availableGENE3D3.50.30.40coord: 20..180
e-value: 4.6E-62
score: 210.5
NoneNo IPR availablePANTHERPTHR33254FAMILY NOT NAMEDcoord: 23..178
NoneNo IPR availablePANTHERPTHR33254:SF7REGULATOR OF RIBONUCLEASE ACTIVITY Acoord: 23..178
IPR036704Ribonuclease E inhibitor RraA/RraA-like superfamilySUPERFAMILY89562RraA-likecoord: 22..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig69contigE-siliculosus-1a_M_contig69:827384..832943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig69.14995.1mRNA_E-siliculosus-1a_M_contig69.14995.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig69 826117..833191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig69.14995.1 ID=prot_E-siliculosus-1a_M_contig69.14995.1|Name=mRNA_E-siliculosus-1a_M_contig69.14995.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=187bp
MAQSGEQTAPSLKGQVQDEAPATADIMDDYDGDVQVVTNSFRDYGGVSRF
CGRVETVKCFENNPLVRQRLTKEDGTGKVLVVDGGGSLRRALMGDQLAAG
GLQNGWRGVIINGAVRDSSEIGKLPFGCKALGTMPRKSEKKVPGEQGVPV
EFGGLRFNAGQFVYADEDGIVVSDEPLRVPRDRSAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036704RraA/RraA-like_sf
IPR010203RraA
IPR005493RraA/RraA-like