mRNA_E-siliculosus-1a_M_contig99.17760.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: D7FI32_ECTSI (T-complex protein 1 subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI32_ECTSI) HSP 1 Score: 1038 bits (2684), Expect = 0.000e+0 Identity = 534/536 (99.63%), Postives = 536/536 (100.00%), Query Frame = 1 Query: 52 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1659 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYF+DMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILK+DDVIMMGNYE Sbjct: 1 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKVDDVIMMGNYE 536
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA) HSP 1 Score: 870 bits (2249), Expect = 3.150e-309 Identity = 440/541 (81.33%), Postives = 490/541 (90.57%), Query Frame = 1 Query: 55 SMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDK------MQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1659 +++FDEYGRPF+ILRE QA+ARIRG+EAQK+NILAARSVS++LR+SLGPKGMDKM+VSPDGDVTI+NDGATIL K M+VEHQVARLLVELSQSQD+EIGDGTTGVVV+AGALLEQAE+LLDRGIHPVRIG+GFDRAC+ A HL KI+D V FS ++ EPLV TAMTTLSSKIINVHK++MA+I V+AV+AVA++ER DVNFDMIKVDGKPGGELGDTEL+ GIVIDKEFSH QMPK +KDAKLC+LTCPFEPPKPKTKHKLDITSK+AYE+L EREQ+YF MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRF EL+ +KLG AG VREV+FGTTKDRMLVIE C NS+AVTVLVRGGNKMIV+EAKRSLHDAMCVVRNLIKD RIVYGGGSAEI+CS+ VS AD I GVEQYAVR+FADALDDVPMALAENSGLSPI+ELSAVK+ Q+ +G + LGIDCNQ GT DMK Q IFETLIGKQQQLLLATQVVKMILKIDD+I MG Y+ Sbjct: 3 NVVFDEYGRPFVILREGQAKARIRGREAQKSNILAARSVSSLLRTSLGPKGMDKMMVSPDGDVTITNDGATILAKASFKLHMEVEHQVARLLVELSQSQDNEIGDGTTGVVVLAGALLEQAERLLDRGIHPVRIGQGFDRACEIATAHLGKISDTVHFSLEDREPLVATAMTTLSSKIINVHKRQMAEICVNAVLAVADMERKDVNFDMIKVDGKPGGELGDTELVRGIVIDKEFSHPQMPKEIKDAKLCILTCPFEPPKPKTKHKLDITSKEAYERLHEREQQYFDTMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFQELSADKLGYAGTVREVAFGTTKDRMLVIEGCKNSNAVTVLVRGGNKMIVDEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSIEVSNAADAIGGVEQYAVRAFADALDDVPMALAENSGLSPISELSAVKAAQVKDGNSHLGIDCNQEGTADMKTQRIFETLIGKQQQLLLATQVVKMILKIDDIITMGQYD 543
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: W7TKH6_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKH6_9STRA) HSP 1 Score: 855 bits (2208), Expect = 4.000e-303 Identity = 422/536 (78.73%), Postives = 484/536 (90.30%), Query Frame = 1 Query: 52 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1659 MS++FDEYGRPFIILREQQAQ R++G EAQK+NI+AARSVS ILR+S GPKGMDKMLV+ DGDVTISNDGATIL KM VEHQVARLLVELSQSQD+EIGDGTTGVVV+AGALLEQAEKLLDRG+HPVR+ EGF++ACQ A+ HLE IAD+V F R+N EPL TAMTTLSSKI+N+HK KMA+IAVDAV++VA+LER DVNFDMIKV+GKPGG L DTEL+ GIV+DKE SH QMPK +KDAK+ +LTCPFEPPKPKTKHKLDI+S++AYE+L+EREQ+YF+ MV+QCKD G NL+ICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRFSEL+ EKLG+AG VREV+FGTTK+RMLVIEDC+ S AVT+LVRGGNKMIVEEAKRSLHDAMCVVRNLIKD RIVYGGGSAEISCS+AV++ AD GV+QYA+R+FADALDDVPMALAEN+GLSPITELS VKS+QI +G +G+DC Q G DM+ Q IFETLIGKQQQ LATQ+V+M+LKIDDV+M GN++ Sbjct: 1 MSLVFDEYGRPFIILREQQAQNRLKGLEAQKSNIMAARSVSQILRTSFGPKGMDKMLVNSDGDVTISNDGATILQKMDVEHQVARLLVELSQSQDEEIGDGTTGVVVLAGALLEQAEKLLDRGLHPVRMAEGFEKACQLAMAHLETIADSVSFGRENIEPLYDTAMTTLSSKIVNIHKSKMARIAVDAVLSVADLERKDVNFDMIKVEGKPGGRLEDTELVRGIVVDKEISHPQMPKTIKDAKIAILTCPFEPPKPKTKHKLDISSREAYERLYEREQEYFTTMVRQCKDSGANLIICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELSPEKLGRAGLVREVAFGTTKERMLVIEDCAKSQAVTILVRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEISCSIAVAKAADTETGVDQYAIRAFADALDDVPMALAENAGLSPITELSQVKSQQIKDGNPHIGVDCMQSGVADMRTQRIFETLIGKQQQFQLATQLVRMVLKIDDVLMHGNFQ 536
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: A0A7S2BNZ2_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNZ2_9STRA) HSP 1 Score: 853 bits (2205), Expect = 1.140e-302 Identity = 429/536 (80.04%), Postives = 486/536 (90.67%), Query Frame = 1 Query: 52 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1659 MSM++DEYGRPF+ILREQQA+AR++G EAQK+NILAARSVSNILR+SLGPKGMDKMLV+ DG VTISNDGATILDKM+VEHQVARLLVELSQSQD+EIGDGTTGVVV+AGALLEQAEKLLDRG HPVRI EGFD+AC AV+ L I+D VEF + NT PL+ TA TTLSSKIINVHK MA+IAV+AV+AVA+ E +DVNFDMIK++GKPGG+LG+TELI GIVIDK+FSH QMPK V DAK+C+LTCPFEPPKPKTKHKLDITSK+AY+KL E+EQ+YF+ MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSELT EKLGKAG VREV+FGT K+RMLV+EDC+NS+AVTVLVRGGN MIVEEAKRSLHDAMCVVRNLIK+ RIVYGGG+AEI+CS A++ AD+ GV+QYA+R+FADAL+D+PMALAENSGLSPIT+LSAVKSRQ+ EG LGIDC + GT DMK+Q +FETLIGKQQQLLLATQVVKMILKIDDVIM G Y+ Sbjct: 1 MSMVYDEYGRPFMILREQQAKARLKGIEAQKSNILAARSVSNILRTSLGPKGMDKMLVNSDGQVTISNDGATILDKMEVEHQVARLLVELSQSQDNEIGDGTTGVVVLAGALLEQAEKLLDRGFHPVRISEGFDQACDIAVQTLADISDVVEFDQQNTTPLLNTAKTTLSSKIINVHKDHMAEIAVEAVLAVADFEHHDVNFDMIKMEGKPGGQLGETELIKGIVIDKDFSHPQMPKEVIDAKMCILTCPFEPPKPKTKHKLDITSKEAYDKLHEQEQEYFTQMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELTSEKLGKAGRVREVAFGTLKERMLVVEDCANSNAVTVLVRGGNSMIVEEAKRSLHDAMCVVRNLIKNNRIVYGGGAAEIACSNAITAQADDKTGVDQYALRAFADALEDIPMALAENSGLSPITQLSAVKSRQVTEGNPHLGIDCKRAGTNDMKDQLVFETLIGKQQQLLLATQVVKMILKIDDVIMHGAYQ 536
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: A0A7S3HCP3_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCP3_9STRA) HSP 1 Score: 849 bits (2194), Expect = 5.300e-301 Identity = 420/535 (78.50%), Postives = 490/535 (91.59%), Query Frame = 1 Query: 52 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 1656 MS++FDEYGRPFIILREQQ +ARI+G +AQK NILAARSV+N+LR+SLGPKGMDKMLVS DG+VTI+NDGATIL KM+VEHQVA+LLV+LSQSQD+EIGDGTTGVVV+AGALLEQAEKLLDRG+HPVRI EGF++A + A++HL+ IAD VEF++DNT PLV TAMTTLSSKIINV+K+KMA+IAVDAV++VA+L+ NDVNFDMIKV+GKPGG L +TELI GIVIDKEFSH QMPK +KDAK+C+LTCPFEPPKPKTKHK+DITSK+AY+KL++ EQ YF+ MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSEL+ KLG+AG VREVSFGTTK+RMLVIEDC+ S+AVTVL+RGGNKMIV+EA RSLHDAMCVVRNLIKD R+VYGGGSAEI+CS+AVS AD + G+EQYA+R+FADALDD+PMALAEN+GLSPITE++++K+RQ+AEG LG+DCNQ+G+ DMK+ +FETLIGK QQL LATQVVKMILKIDDVIM G Y Sbjct: 1 MSLVFDEYGRPFIILREQQQKARIKGLDAQKANILAARSVTNLLRTSLGPKGMDKMLVSSDGEVTITNDGATILQKMEVEHQVAKLLVDLSQSQDNEIGDGTTGVVVLAGALLEQAEKLLDRGLHPVRISEGFEQAMEVALKHLQTIADRVEFTKDNTTPLVDTAMTTLSSKIINVYKRKMAQIAVDAVLSVADLDNNDVNFDMIKVEGKPGGRLEETELIKGIVIDKEFSHPQMPKEIKDAKMCILTCPFEPPKPKTKHKMDITSKEAYDKLYKYEQDYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNGLPAVRWVGGVELELIAIATGGRIVPRFSELSEAKLGRAGTVREVSFGTTKERMLVIEDCACSNAVTVLIRGGNKMIVDEAHRSLHDAMCVVRNLIKDNRVVYGGGSAEIACSLAVSAFADTVPGIEQYAIRAFADALDDLPMALAENAGLSPITEVTSIKARQLAEGNPRLGVDCNQIGSNDMKDHLVFETLIGKMQQLQLATQVVKMILKIDDVIMYGGY 535
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: A0A6T5Q400_HETAK (T-complex protein 1 subunit epsilon n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q400_HETAK) HSP 1 Score: 834 bits (2154), Expect = 5.920e-295 Identity = 417/535 (77.94%), Postives = 475/535 (88.79%), Query Frame = 1 Query: 52 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 1656 MSM+FDEYGRPFIIL+EQQA+AR++G EA K NILAAR VS +LR+SLGPKGMDKMLV+PDGDVTISNDGATIL MQVEHQVARLLVELSQSQDDEIGDGTTGVVV+AGALLEQAEKLL RG+HPVRI EGF+ AC AV L +IAD VEFSR+NT+ L+ TA TTLSSKIIN+HK +MA+IAV+AV++VA+LER+DVNFDMIK+ GKPGG L +TELIHGIVIDKE+SHAQMPK V+DA++C+LTCPFEPPKPKTKHKLDITS++AY++L REQ+YF MV+QCK+ G N+VICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRF EL EKLG+AG +REV+FGTTK+RM+VIE C+ S+AVT+LVRGGNKMIVEEAKRSLHDAMCV RNLIKD RIVYGG SAE++C++AV AD + G+EQYA+R+FADALDDVPMALAENSGL PI ELS VK+ Q+ G LG+DCNQ GT DM+EQ IFETLIGKQQQL LATQVVKMILKIDDVIM G Y Sbjct: 1 MSMVFDEYGRPFIILKEQQAKARVKGIEAMKGNILAARCVSKVLRTSLGPKGMDKMLVNPDGDVTISNDGATILKNMQVEHQVARLLVELSQSQDDEIGDGTTGVVVLAGALLEQAEKLLQRGLHPVRIAEGFELACGVAVARLAQIADRVEFSRENTDILMNTAKTTLSSKIINIHKDRMARIAVEAVLSVADLERHDVNFDMIKMTGKPGGRLEETELIHGIVIDKEWSHAQMPKEVRDARMCILTCPFEPPKPKTKHKLDITSREAYDRLHAREQEYFGTMVRQCKESGANVVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFGELAPEKLGRAGLIREVAFGTTKERMMVIEQCAQSNAVTILVRGGNKMIVEEAKRSLHDAMCVTRNLIKDNRIVYGGASAEVACALAVGAHADRVLGMEQYAIRAFADALDDVPMALAENSGLQPIEELSRVKAAQVETGNPYLGVDCNQTGTNDMREQQIFETLIGKQQQLQLATQVVKMILKIDDVIMYGAY 535
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: A0A6U3ULQ3_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ULQ3_9STRA) HSP 1 Score: 833 bits (2152), Expect = 1.540e-294 Identity = 414/542 (76.38%), Postives = 488/542 (90.04%), Query Frame = 1 Query: 52 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVG------TCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1659 MSMI+DEYGRPFIIL+EQQA+AR++G EAQK+NILAARS+SNILR+SLGPKGMDKMLVSPDGDVTI+NDGATILD+M V+HQVA+L+VELS SQDDEIGDGTTGVVV+AGALLEQAEKLL+RGIHPVR+ EGF++A + A+E L+KI D VEFS +N +PLVTTAMTTLSSKIINV+K+KMA+IAV+AV+ VA++ER DVNFDMI+++GKPGG L DTEL++GIVIDKE SH QM K +KDAK+C+LTCPFEPPKPKTKHKLDITSK+AYEKL+ +EQ+YF +MVQQ KD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVE+E IAIATGARIVPRFSEL+ EKLGKAG VREVSFG TK+RMLVIEDC+NS+AVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKD R+VYGGGSAEI+CS+A+S+ AD + GV+QYA+R+FADALDD+P+ALAEN+GLSPI E++A KSRQ+ E +G+ +++ + DMKE G+FE LIGKQ+Q+ LATQVVKMILKIDDVI MG+Y+ Sbjct: 1 MSMIYDEYGRPFIILKEQQAKARVKGLEAQKSNILAARSISNILRTSLGPKGMDKMLVSPDGDVTITNDGATILDRMHVDHQVAKLMVELSASQDDEIGDGTTGVVVLAGALLEQAEKLLNRGIHPVRVAEGFEKAAEVAIETLDKIGDRVEFSSENIDPLVTTAMTTLSSKIINVNKEKMARIAVNAVLNVADIERGDVNFDMIRMEGKPGGSLEDTELVNGIVIDKEISHPQMSKEIKDAKMCILTCPFEPPKPKTKHKLDITSKEAYEKLYNQEQEYFREMVQQVKDSGANLVICQWGFDDEANHLLLQNGLPAVRWVGGVEIEHIAIATGARIVPRFSELSEEKLGKAGVVREVSFGNTKERMLVIEDCANSNAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRVVYGGGSAEIACSIAISKYADTVSGVDQYAIRAFADALDDIPLALAENAGLSPIEEVAAAKSRQLREDNCRIGLGMDRMNDDDGMHSRDMKEAGVFEALIGKQEQIQLATQVVKMILKIDDVISMGHYQ 542
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: A0A7S2PT90_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PT90_9STRA) HSP 1 Score: 833 bits (2151), Expect = 2.030e-294 Identity = 414/540 (76.67%), Postives = 485/540 (89.81%), Query Frame = 1 Query: 52 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGI--DCNQV---GTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 1656 MS+I+DEYGRPFIIL+EQQA+ARIRG EAQK+NILAAR++S ILR+SLGPKGMDKMLVS DGDVTI+NDGATIL KM+V+HQVARLLVELS SQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVR+ EGF++AC+ A+ L +IAD +EFS+D+ EPL+TTAMTTL+SKIINV K+KMA+IAV+AV+ VA+LER DVNFDMI+ +GKPGG L DTEL++G+ IDKE SH QM K +KDAK+C+LTCPFEPP+PKTKH LDITSK+AYEKL+E+EQKYF+DMV+Q KD G NLVICQWGFDDEANHLLLQN LPA+RWVGG+E+E IAIATG RIVPRFSELT EKLGKAG VREVSFGT+K++M+VIE CSNS+AVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKD RIVYGGGSAE++C +AVS+ A+ + GV+QYA+R FADALDD+P+ALAEN+GLSPI E++A+KSRQ++EG +G+ DC Q T DM+EQG+FETL+GKQQQL LATQVVKMILKIDDVI+ G Y Sbjct: 1 MSLIYDEYGRPFIILKEQQAKARIRGLEAQKSNILAARAISQILRTSLGPKGMDKMLVSQDGDVTITNDGATILSKMEVDHQVARLLVELSSSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRVAEGFEKACEVAISTLGEIADTIEFSKDDIEPLMTTAMTTLNSKIINVSKRKMAEIAVNAVLCVADLERKDVNFDMIRTEGKPGGCLEDTELVNGLAIDKEISHPQMAKEIKDAKICILTCPFEPPRPKTKHHLDITSKEAYEKLYEQEQKYFTDMVKQVKDSGANLVICQWGFDDEANHLLLQNDLPAIRWVGGIEIEHIAIATGGRIVPRFSELTPEKLGKAGLVREVSFGTSKEKMIVIEGCSNSNAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEVACGIAVSKYAESVVGVDQYAIRGFADALDDIPLALAENAGLSPIEEVAAIKSRQLSEGNPRIGVGVDCVQTDGRSTIDMREQGVFETLVGKQQQLQLATQVVKMILKIDDVILSGQY 540
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: F0YIY6_AURAN (T-complex protein 1 subunit epsilon n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIY6_AURAN) HSP 1 Score: 832 bits (2150), Expect = 1.370e-292 Identity = 420/543 (77.35%), Postives = 485/543 (89.32%), Query Frame = 1 Query: 31 KSPTACTMSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEP-LVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 1656 ++ A TMSM+FDEYGRPFIIL+EQQ ++RI+G EAQK NI+AARSVSNILR+SLGPKGMDKM+VSPDGD+TI+NDGATILDKM VEHQVARLLVELSQSQDDEIGDGTTGVVV+AG+LLEQAEKLLD+G+HPVRI EGF+ AC+ A++ L +AD V F + + LV TAMTTLSSKIINVHK+KMA+IAVDAVM+VA+++RNDVNFDMIK++GKPGG L +TELI GIVIDK+ SH QM K +KDAK+C+LTCPFEPPKPKTKHKLDITSK+ Y+KLF REQ YF++MV QCK G N+VICQWGFDDEANHLLLQ LPAVRWVGGVELELIAIATG RIV RFSEL+ KLGKAG VREV+FGTTK+RMLVIEDC++S AVTVLVRGGNKMIVEEAKRSLHDAMCVVRNL+KD RIVYGGG+AEI+CS+AVS+ AD+ G +QYA+R+FADALDDVPMALAENSGLSPITEL+AVK++Q+AE +LG+DC Q GT DMK+Q +FETLIGKQQQ+ LATQVVKMILKIDDVIM G+Y Sbjct: 102 RAALAATMSMVFDEYGRPFIILKEQQQKSRIKGLEAQKHNIMAARSVSNILRTSLGPKGMDKMMVSPDGDITITNDGATILDKMAVEHQVARLLVELSQSQDDEIGDGTTGVVVLAGSLLEQAEKLLDKGLHPVRIAEGFETACKVAMKTLGDVADTVAFDKTKDDKVLVETAMTTLSSKIINVHKRKMAQIAVDAVMSVADVDRNDVNFDMIKMEGKPGGRLEETELIKGIVIDKDISHPQMAKEIKDAKMCILTCPFEPPKPKTKHKLDITSKEDYDKLFAREQHYFTEMVAQCKACGANMVICQWGFDDEANHLLLQAGLPAVRWVGGVELELIAIATGGRIVARFSELSEAKLGKAGCVREVAFGTTKERMLVIEDCASSEAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLVKDNRIVYGGGAAEIACSIAVSQAADDATGQDQYAIRAFADALDDVPMALAENSGLSPITELTAVKAKQLAEKNPNLGVDCLQQGTNDMKQQKVFETLIGKQQQVQLATQVVKMILKIDDVIMHGSY 644
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Match: A0A7S2UFZ6_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFZ6_9STRA) HSP 1 Score: 825 bits (2131), Expect = 2.350e-291 Identity = 410/542 (75.65%), Postives = 488/542 (90.04%), Query Frame = 1 Query: 52 MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATILDKMQVEHQVARLLVELSQSQDDEIGDGTTGVVVMAGALLEQAEKLLDRGIHPVRIGEGFDRACQTAVEHLEKIADAVEFSRDNTEPLVTTAMTTLSSKIINVHKQKMAKIAVDAVMAVANLERNDVNFDMIKVDGKPGGELGDTELIHGIVIDKEFSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFSDMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVG------TCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYE 1659 MSMI+DEYGRPFIIL+EQQA+ R++G EAQK+NILAA+S+S+ILR+SLGPKGMDK+LVS DGDVTI+NDGATIL++M+V HQVA+LLVELS SQDDEIGDGTTGVVV+AGALLEQAEKLLDRGIHPVR+ EG+++A + A++ LE+IAD V FS+DN EPLV TAMTTL+SKIINVHK+KMA+IAV+AV+ VA+++R+DVNFDMI+++GK GG L DTEL++GIVIDK+FSH QM KVVKDAK+C+LTCPFEPPKPKTKHKLDI SK+AY+KL++ EQ YF +MVQQ KD G N+VICQWGFDDEANHLLLQN LPAVRWVGGVE+E IAIATG RIVPRFSEL+ EKLG+AG VREVSFGTTK+RMLVIEDC+NS+AVTVLVRGGNKM+VEEAKRSLHDAMCVVRNLIKD R+VYGGGSAEI+CS+AVS+ A+ + GV+QYA+R+FADALDD+P+ALAEN+GLSPI EL+A KSRQI EG + +G+ +QV + DM++ G+FETLIGKQQQL LATQVVKMILKIDDVI MG Y+ Sbjct: 1 MSMIYDEYGRPFIILKEQQAKNRVKGLEAQKSNILAAKSISSILRTSLGPKGMDKILVSQDGDVTITNDGATILERMEVSHQVAKLLVELSASQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPVRVAEGYEKAAEVAIKTLEEIADRVAFSKDNVEPLVATAMTTLNSKIINVHKRKMAEIAVNAVLGVADIDRHDVNFDMIRLEGKAGGSLEDTELVNGIVIDKDFSHPQMAKVVKDAKMCILTCPFEPPKPKTKHKLDINSKEAYDKLYKYEQDYFKEMVQQVKDSGANMVICQWGFDDEANHLLLQNGLPAVRWVGGVEIEHIAIATGGRIVPRFSELSAEKLGRAGTVREVSFGTTKERMLVIEDCANSNAVTVLVRGGNKMVVEEAKRSLHDAMCVVRNLIKDNRVVYGGGSAEIACSIAVSKYAETMVGVDQYAIRAFADALDDIPLALAENAGLSPIEELAAAKSRQIREGSSVIGLGLDQVSEIDDDHSWDMRKLGVFETLIGKQQQLQLATQVVKMILKIDDVISMGQYQ 542 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig99.17760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig99.17760.1 >prot_E-siliculosus-1a_M_contig99.17760.1 ID=prot_E-siliculosus-1a_M_contig99.17760.1|Name=mRNA_E-siliculosus-1a_M_contig99.17760.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=537bp MSMIFDEYGRPFIILREQQAQARIRGKEAQKTNILAARSVSNILRSSLGPback to top mRNA from alignment at E-siliculosus-1a_M_contig99:205551..216279+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig99.17760.1 ID=mRNA_E-siliculosus-1a_M_contig99.17760.1|Name=mRNA_E-siliculosus-1a_M_contig99.17760.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=10729bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:205551..216279+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:205551..216279+ >mRNA_E-siliculosus-1a_M_contig99.17760.1 ID=mRNA_E-siliculosus-1a_M_contig99.17760.1|Name=mRNA_E-siliculosus-1a_M_contig99.17760.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=3222bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:205551..216279+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |