mRNA_E-siliculosus-1a_M_contig99.17750.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_M_contig99.17750.1
Unique Name	mRNA_E-siliculosus-1a_M_contig99.17750.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: D7FI21_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI21_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.540e-117
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 3

Query:  276 MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGEAT 812
            MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGEAT
Sbjct:    1 MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGEAT 179

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A7S2GD37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GD37_9STRA)

HSP 1 Score: 241 bits (616), Expect = 4.530e-70
Identity = 113/168 (67.26%), Postives = 136/168 (80.95%), Query Frame = 3

Query:  267 NLAMSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHA 770
            N A+  KRK++  S  EN+SPQVI RV REI  L ++PPDGIR++  E++ I+EIH ++ GP GTPY GG F +KLVLS DFP SPPRGFF TKIYHPNV+  G+ICVNTLKRDWTA+V++ H+LQVIRCLLIVPFPESSLNDEAG+LFMESYTEY  R ++W  VHA
Sbjct:    2 NSAIGIKRKLN--SGVENLSPQVIVRVSREIAALAKSPPDGIRYVAMEDEKISEIHVKMAGPDGTPYQGGIFRVKLVLSYDFPQSPPRGFFQTKIYHPNVSTKGEICVNTLKRDWTADVSIVHILQVIRCLLIVPFPESSLNDEAGKLFMESYTEYAERARLWTRVHA 167

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A8K1CMN2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMN2_PYTOL)

HSP 1 Score: 241 bits (614), Expect = 1.460e-69
Identity = 107/166 (64.46%), Postives = 134/166 (80.72%), Query Frame = 3

Query:  315 ENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGEAT 812
            EN++PQVI RV +EI+ L  NPP+GIR++PQE++ + EIH EI GP  TPYDGG F +KL LS+ FPH+PP+G FLTKI+HPN+A NG+ICVNTLK+DWT+ + + HVLQVIRCLLIVPFPESSLNDEAGRLFMESY EY RR ++W N+HA K  +   D  ++T
Sbjct:    6 ENLAPQVIQRVAKEIRQLVTNPPNGIRYVPQEDEVLTEIHVEIAGPENTPYDGGYFQVKLTLSDGFPHAPPKGVFLTKIFHPNIATNGEICVNTLKKDWTSTLGIAHVLQVIRCLLIVPFPESSLNDEAGRLFMESYDEYARRARLWTNIHAPKVSAVKKDTEKST 171

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A4D9CPA5_9STRA (UBC core domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPA5_9STRA)

HSP 1 Score: 236 bits (601), Expect = 7.480e-68
Identity = 110/165 (66.67%), Postives = 132/165 (80.00%), Query Frame = 3

Query:  303 LSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPD 797
            +SS+EN+SPQVI+R+ REIQDL R P  GIR      D IAEIHAEI GP  TPY  G+FH+KLVLS DFP+SPPRG+FLT+IYHPNV+  GDICVNTLKRDW+  VTL HVLQVIRCLLIVPFPESSLNDEAG+ FMESY +Y RR ++  +VHA + ++ + +
Sbjct:    1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEIHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSE 165

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A836CAV4_9STRA (Ubiquitin-conjugating enzyme E2S n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV4_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.040e-67
Identity = 106/155 (68.39%), Postives = 128/155 (82.58%), Query Frame = 3

Query:  315 ENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKS 779
            EN SPQ ISR+ RE+ +L R  P+G  F+P E D IAEI  +I+GPVGTPY+GGSF +KLVLS+D+P SPPRGFFLT+IYHPNV P GDICVNTLK+DWT  VT+ H+ QVIRCLLIVPFPESSLNDEAG+LFMESY E+ RR ++  +VHA+K+
Sbjct:    7 ENFSPQTISRLHREVGELARASPEGCTFVPSETDNIAEIMCDIEGPVGTPYEGGSFRVKLVLSSDYPSSPPRGFFLTRIYHPNVGPTGDICVNTLKKDWTQAVTMAHIFQVIRCLLIVPFPESSLNDEAGKLFMESYEEFSRRARLMTSVHAAKN 161

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A067BZY2_SAPPC (UBC core domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZY2_SAPPC)

HSP 1 Score: 233 bits (594), Expect = 1.590e-67
Identity = 105/167 (62.87%), Postives = 135/167 (80.84%), Query Frame = 3

Query:  303 LSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGG 803
            +++ EN SPQ++ RV +E++ L  NPPDGIR L  E+D++AEIH E++GP  TPY GG F +KL+L++ FP +PP+G FLTKI+HPN+APNGDICVNTLKRDW+A++ L+HVLQVIRCLLIVPFPESSLNDEAG+LFME Y EY RR K+  ++HA+KS     D G
Sbjct:    1 MAAHENFSPQILQRVAKEVRQLATNPPDGIRLL--EQDSLAEIHVELRGPEETPYVGGFFEVKLLLTDGFPTTPPKGVFLTKIFHPNIAPNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYARRAKILTDIHATKSKFKTTDAG 165

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: K3WZA4_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZA4_GLOUD)

HSP 1 Score: 235 bits (600), Expect = 2.380e-67
Identity = 109/166 (65.66%), Postives = 133/166 (80.12%), Query Frame = 3

Query:  315 ENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASK-SLSSAPDGGEA 809
            EN+ PQVI RV REI+ L   P DGIR+LPQ+++ + EI AEI+GP  TPY+GG F IKLVLS+ FP +PPRG FLTKI+HPN+A NGD+CVNTLK+DW+ ++ + HVLQVIRCLLIVPFPESSLNDEAGRLFMESY EY RR ++W N+HA K S S  P+  +A
Sbjct:    5 ENLPPQVIQRVAREIRQLVVTPLDGIRYLPQDDEQLTEIRAEIQGPENTPYEGGFFRIKLVLSDGFPQTPPRGVFLTKIFHPNIATNGDVCVNTLKKDWSPQLGIAHVLQVIRCLLIVPFPESSLNDEAGRLFMESYEEYARRARIWTNIHAPKESASPKPEEDDA 170

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A425CV13_9STRA (UBC core domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CV13_9STRA)

HSP 1 Score: 232 bits (591), Expect = 7.400e-67
Identity = 105/171 (61.40%), Postives = 135/171 (78.95%), Query Frame = 3

Query:  285 KRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPD 797
            K+   ++S+ EN SPQ+I RV +EI+ L  NPP GIR+LPQ+++++AEIH E+ GP  TPY GG F +KL+L+  FP  PP+G FLTKI+HPNVA NGDICVNTLKRDW+A++ L+HVLQVIRCLLIVPFPESSLNDEAG+LFME Y EY +R ++  ++HASK+     D
Sbjct:    2 KKAACMMSAHENFSPQIIQRVAKEIRQLATNPPSGIRYLPQDDESLAEIHVELVGPEDTPYAGGFFEMKLLLTEGFPTVPPKGHFLTKIFHPNVASNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYAQRARILTSIHASKTKCKDAD 172

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A7S2W6M0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6M0_9STRA)

HSP 1 Score: 231 bits (590), Expect = 2.100e-66
Identity = 111/177 (62.71%), Postives = 138/177 (77.97%), Query Frame = 3

Query:  276 MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDGGE 806
            + +KR +S     EN+ PQVI+R+ +EI     NPP GIR++P E+D I+EIHA I+GP  TPY  G+FHIKLVL +D+P +PPRGFFLTKIYHPNV+  G+ICVNTLKRDW+A+V+L+HVLQVIRCLLIVPFPESSLNDEAG+LFMESY EY RR K+   +HA+   S+   G E
Sbjct:    4 VGSKRSLSQ----ENLPPQVIARLTKEIAAFASNPPAGIRYVPPEDDKISEIHATIQGPEETPYASGTFHIKLVLGHDYPQAPPRGFFLTKIYHPNVSAKGEICVNTLKRDWSADVSLSHVLQVIRCLLIVPFPESSLNDEAGKLFMESYEEYCRRAKLLTRLHATAHPSNTGGGAE 176

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BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Match: A0A7S2W2W0_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2W0_9STRA)

HSP 1 Score: 230 bits (586), Expect = 4.180e-66
Identity = 107/169 (63.31%), Postives = 137/169 (81.07%), Query Frame = 3

Query:  285 KRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSA 791
            KRKMS  SS EN+SPQV+  + RE++ L   P +GI  L  EED + +I A+I+GPVGTPY+GG+F  KLVLSNDFP+SPPRGFFLTKI+HPNVAPNGDICVNTLKRDW A++ ++H+ QVIRCLLI+PFPES+LN++A +LF+ESY EY +R K+  ++HA+K  S A
Sbjct:    3 KRKMS--SSHENLSPQVLQSIARELRKLAVKPLEGIHILINEED-LTDIQADIEGPVGTPYEGGAFRCKLVLSNDFPNSPPRGFFLTKIFHPNVAPNGDICVNTLKRDWKADLGMSHIFQVIRCLLIIPFPESALNEDASKLFLESYNEYAKRAKLMTSIHAAKKCSDA 168

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig99.17750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
D7FI21_ECTSI	1.540e-117	100.00	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A0A7S2GD37_9STRA	4.530e-70	67.26	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A8K1CMN2_PYTOL	1.460e-69	64.46	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A4D9CPA5_9STRA	7.480e-68	66.67	UBC core domain-containing protein n=2 Tax=Monodop...	[more]
A0A836CAV4_9STRA	1.040e-67	68.39	Ubiquitin-conjugating enzyme E2S n=1 Tax=Tribonema...	[more]
A0A067BZY2_SAPPC	1.590e-67	62.87	UBC core domain-containing protein n=2 Tax=Saprole...	[more]
K3WZA4_GLOUD	2.380e-67	65.66	UBC core domain-containing protein n=1 Tax=Globisp...	[more]
A0A425CV13_9STRA	7.400e-67	61.40	UBC core domain-containing protein n=5 Tax=Aphanom...	[more]
A0A7S2W6M0_9STRA	2.100e-66	62.71	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2W2W0_9STRA	4.180e-66	63.31	Hypothetical protein (Fragment) n=1 Tax=labyrinthu...	[more]

Pages

Properties


Property Name	Value
Start	1
Stop	1
Cds size	876
Model size	2723
Exons	4
Ec32 ortholog	Ec-10_003200.1
Ec32 ortholog description	Ubiquitin-conjugating enzyme E2
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko01000,ko04121
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	O
EC	2.3.2.23
EggNOG OGs	COG5078@1,KOG0423@2759
EggNOG free text desc.	protein modification by small protein conjugation
GOs	GO:0000151,GO:0000152,GO:0000209,GO:0000278,GO:0000280,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010458,GO:0010498,GO:0010604,GO:0010992,GO:0010994,GO:0016043,GO:0016567,GO:0016740,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022402,GO:0022607,GO:0030163,GO:0031145,GO:0031323,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031625,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032991,GO:0034622,GO:0035519,GO:0036211,GO:0042592,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044314,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0048285,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051258,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0060255,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070534,GO:0070647,GO:0070979,GO:0071704,GO:0071840,GO:0080090,GO:0085020,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1903047,GO:1903320,GO:1903322,GO:1904666,GO:1904668,GO:1990234
KEGG Pathway	ko03013,ko04120,ko04744,map03013,map04120,map04744
KEGG ko	ko:K10583,ko:K13764,ko:K14292
Preferred name	UBE2S
Seed eggNOG ortholog	2880.D7FI21
Seed ortholog evalue	1.2e-99
Seed ortholog score	369.8
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig99.17750.1	prot_E-siliculosus-1a_M_contig99.17750.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	polypeptide	E-siliculosus-1a_M_contig99 93929..97986 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622936571.0334046-UTR-E-siliculosus-1a_M_contig99:93653..93928	1622936571.0334046-UTR-E-siliculosus-1a_M_contig99:93653..93928	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig99 93654..93928 +
1696251136.4424477-UTR-E-siliculosus-1a_M_contig99:93653..93928	1696251136.4424477-UTR-E-siliculosus-1a_M_contig99:93653..93928	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig99 93654..93928 +
1622936571.112048-UTR-E-siliculosus-1a_M_contig99:97986..99558	1622936571.112048-UTR-E-siliculosus-1a_M_contig99:97986..99558	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig99 97987..99558 +
1696251136.506809-UTR-E-siliculosus-1a_M_contig99:97986..99558	1696251136.506809-UTR-E-siliculosus-1a_M_contig99:97986..99558	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig99 97987..99558 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622936571.0490026-CDS-E-siliculosus-1a_M_contig99:93928..94029	1622936571.0490026-CDS-E-siliculosus-1a_M_contig99:93928..94029	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig99 93929..94029 +
1696251136.453822-CDS-E-siliculosus-1a_M_contig99:93928..94029	1696251136.453822-CDS-E-siliculosus-1a_M_contig99:93928..94029	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig99 93929..94029 +
1622936571.0656135-CDS-E-siliculosus-1a_M_contig99:94453..94530	1622936571.0656135-CDS-E-siliculosus-1a_M_contig99:94453..94530	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig99 94454..94530 +
1696251136.4627583-CDS-E-siliculosus-1a_M_contig99:94453..94530	1696251136.4627583-CDS-E-siliculosus-1a_M_contig99:94453..94530	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig99 94454..94530 +
1622936571.0820115-CDS-E-siliculosus-1a_M_contig99:96607..96798	1622936571.0820115-CDS-E-siliculosus-1a_M_contig99:96607..96798	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig99 96608..96798 +
1696251136.4796865-CDS-E-siliculosus-1a_M_contig99:96607..96798	1696251136.4796865-CDS-E-siliculosus-1a_M_contig99:96607..96798	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig99 96608..96798 +
1622936571.0958216-CDS-E-siliculosus-1a_M_contig99:97479..97986	1622936571.0958216-CDS-E-siliculosus-1a_M_contig99:97479..97986	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig99 97480..97986 +
1696251136.4903588-CDS-E-siliculosus-1a_M_contig99:97479..97986	1696251136.4903588-CDS-E-siliculosus-1a_M_contig99:97479..97986	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig99 97480..97986 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_M_contig99:93654..99558+
coding sequence from alignment at E-siliculosus-1a_M_contig99:93654..99558+

protein sequence of mRNA_E-siliculosus-1a_M_contig99.17750.1

>prot_E-siliculosus-1a_M_contig99.17750.1 ID=prot_E-siliculosus-1a_M_contig99.17750.1|Name=mRNA_E-siliculosus-1a_M_contig99.17750.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=292bp
MSNKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIA
EIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPN
GDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESY
TEYERRVKVWVNVHASKSLSSAPDGGEATSGGGSSGSGAAIKGGVVKAGG
NGDSGAAVAAAAAAPAAAPAAVSGKKAAPSGKKGSSSAKVAGGGGAAGGV
AGGKRREDAGAAAAAAGAAAAPRKTVKDRQKEAKKKGLKRL*

mRNA from alignment at E-siliculosus-1a_M_contig99:93654..99558+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_M_contig99.17750.1 ID=mRNA_E-siliculosus-1a_M_contig99.17750.1|Name=mRNA_E-siliculosus-1a_M_contig99.17750.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5905bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:93654..99558+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGACTTCTCTCTGTGCGGCACACCGTGGCACGACGAACTCGTCTTTCGC
GCGCGTTTGACCCAACGCCCCTCGAGGAACAGCAGACAGGACGTCCGGCT
CTGTATCATCAGCACGCCCGGACCCAGCGTACTTTCCGTGGTCGCTGGAG
ACAGGAGAGAGAAGGGGGTGTCTCTCGGACCACCCTACGGCAAAGCGTGT
GTGTACGCCAGTTTTGCCACACTTTTCTCTCACGCAGTGGGGGGGGGGCT
TCTTCACTTTGCGGGTAACCTGGCCATGAGCAACAAGAGAAAAATGTCTC
TGCTTTCGTCGTTCGAGAACATCTCACCCCAGGTCATCAGCCGGGTGGGA
CGAGAGATTCAAGACCTGCAGCGAAAGTGAGTCTCTCTCACAAAACTCGG
CGAGATTTTCTCGATTCCCCACACCCCCCATCTCTCTTGCTCGCGCGAAA
AAACCGGACGCACACGGCCTGCTGTACTGCTGTACCTCGAGGAACGGCTT
CGGGCATCAAACCCTCTATCGGCTCTTGAAACAGCGGGCCTAGTGAGGCG
TGTTTGACTTCTTTGGGCAATCGGCGTGAGGAACCACAGTGGTATTTACT
GATTTTGCCCGTGTAGATGGTTTCAACGGGTTGTTGTCGCCGCGCTACAA
TCAGGCGGCGATTTACGTGTGCAGAGATGAAACCCAACCGCCGATTGTTG
CAGCCCCTCTTTCCAATCTCTCATCAACAACAACGCTTGTCCCCCTTTTT
TTCCCGCCACTGCGCTCCCCCCCTGTCCACGCGCCGCGATGGGACAACAG
CCCTCCAGACGGTATCCGCTTCTTGCCCCAGGAAGAGGACACGATCGCTG
AAATCCACGCGGAAATCAAGGGTCCAGGCAAGTAAAATATGTGTTGTGTT
TTTATCTCCGCTCTCCACCTCGCTGCAGAAGAGGTCGCTTTTTCGCTTTT
GCCGAGGGGCTGGATCGGGAAACACCACATGATGAGAGACACCAGAGATA
TGCACAGCAGTAGGGGAGGCCTTTTCCTACCGGGAACAATAATGTGATCA
GCCACGTCTCACAACCGTTCCGGGCAACAAGCGTGTGCCTGGGGGTCAGC
TCGTGCGTAATACTTCGTTGATGCGCGGACGAGTGTTCGGGTATCCCGCC
CGCCGCCGACAAGTGAGGGTACATAAAATACTATGACGATCCCTCCCTCG
GTTTCGGAAAAGGGTCCCACCAGCGAGCTGCCTCTGCTGTTGCTGCTGCT
GCTGAGTGCCACCCTTTTGAGTCCGCTTGCTCTGAGCCAGATTTTGTGAG
CACCGTAGACGTAGGCGTGCTGTTTCCTGTAGTTTGACCACAGCCTCGAG
AGGTACGTGTGCATGAACGTAACAGGCGCGGCGGTACTACAAAAGAGTAA
ACCGCGATAGAAAATTCTTTCTCGAACACCTTTCTCCGCCTTCCTCCACT
CGCACGAGATCAACGAGACGCGACGGCTAATATTGTCATAGTTGGCGACC
GCCGTGCGAGTTTGAGCGTTTGCTTTTTCTTTGTTTGGGAGGGGAGGATG
GGGGACAAGGCACTCCGAGACACAGCAAGGGAACGAAAACAACTCAGCAT
TTCTCATATCTTGGATACTATACAAATAGATCTAGCGAGAAACACGCACT
TCCCACAAACGACGGTGTGCCACTGAACCGAATGCAGAGATTGATGCTCC
TGAGAAGCACCTAGTGGTATGGAGGCTTGTTTGCGCAACACAAGTGAGGA
ATGGCGACACGTGTGCCCCTTCTCGCGCGAACCACGCGTAACGCAGAGAA
ACTTGTCTTGTGGAGTGGAAATAATTTTGTTCCGATCGAGGCCTCGCCCT
GTTGTCGTATGTACACTGTAACAGAACTTGCGTACCCGGAGGTAAGAATG
TCGTATGCACATGGACACGACGGTAACGACATGAAGACCCTTACAGGTGT
AGGACGAAAAAGGACAAAAGGACACAAGGGGCGGGGGGGGCGGGGGGCTC
TTGCTGCACACTAGTGTCGTTTCCCGGCAGGCACTTGGCGCTGCCGTTGT
GGGACGCATTTGTGGGCTCTTGTGCCTTTCACCCCCACTTTAGTACCGGT
GGGAGAAGTGTATTTATCCTTGTCTGCCCCGAAATGACCAGCAGGTGAGA
CACATTATTTTTGTGTGGATACATCCCAGTTAAGGTTTCCATTTGCATTC
CAACAACGATGGCGTTGGTGGTGAGTGTGACCGTATTGCCAAAAGCCGTA
TACTCCTTGCAACAAGATAAAATCTGAAAAATCTGAATTTAGTAGATGAA
TTTCGCCCGGAAGGTGGAATGGTGCGGAGCACAAGGACTTTGGCTTGGGC
ACGAAACCAACATCAGCTCTAGTACAGGTAGATGCTTCGAGTGCTTCTCT
TGTCTGGGCATGCGTTGAGCCCCGACATCTGTACGCCCACGCGTGCGATG
CGGGCATGTCTTGCTGCTGCTGCTCTTGCTGCTGCTATTGCCATTGCCAA
CTCTACCCTCGTTTTTCTCGACAGGATGTCGCACCTGCCGCTCTGTGTGC
CGATGTACGCGTGTACTGCTGTAAGAACATACCTCTTCGCCCCACTTCCA
CCCTGCCTCGTTCCTCAACATGGTCGTCAACATGCTCGTGCCTCGTGCGT
AGGCGAAGCTCCAGATCCTCGGCTAAGCAATGTTTGCTACAGCAGTGTTG
CGTTATGCATGTTTTAAAAGTTCTTGGTACGCCGTCCAGAAACCGCACTC
TTCTTTGGCACAAGGAGGCGTTTTTTCCCGATCCCTCCTTATCGGCGCGC
AAGCTTGTGCGCCGCTCCGCTACCTACGTGCAGCCTTTGAACAGACGGTT
GTTGCGTGTCTCCCCCCCCCCCCTTCTGGTTTCCTTACTTTCGCCTCGCC
CGTGCGCTTGCGTTCCGCCCCGTGTGATAAACCCTCATTCCACGACGGAC
GCAGTCGGGACTCCCTACGATGGTGGGTCCTTCCACATCAAGCTCGTCCT
GAGCAACGATTTCCCGCACTCGCCGCCCAGAGGTTTCTTCCTCACCAAGA
TCTACCACCCCAACGTTGCTCCGAACGGTGACATCTGCGTCAACACGCTC
AAGAGAGATTGGACGGCGGAGGTTACTCTGACCCACGTCTTGCAGGTAGG
CGGTGGCGGGGGCACAGCAGCAGCAGGAGCAGGGCGGGGGGGGGGGGGGG
GTACGTAGTACACGACGGGGAAACAAAGCCGTGCACGCGGCCCTTTGCCG
TCCGGGGTATGAAGGATGGTACGTAGGTAACTCATGTAGTTGCGAGGTTT
CGCTCCTTTTTTCTTTTCTTTTTATTGCAGCAAGGCGTGGTCTTGCTGGC
AGTGGTCTTGGATTGCCGTTGGGAGTTGAATGTCTCGCAACGTCTATTCT
AGCGCTTTCGAGCCGGCCGTGGAACCGTACCTGCTGTTTTCGACGATCGA
TGCCCTGGAAGCCGAGACATGGGATATGCTGGCTGGGAGGGTTGCGCTGG
CCTCACACATCACGTCTGGAATTGTTTCAGGGTCCGTTGCCGGTCGGTCA
CTTGCGGCACGTTTCGTTGCGGTATCCTACATGCCCCGAAGTGATGCCTC
CTCGCAGTCAATAAAGGTGTTCCATGTTTGCTCACCACCCTTGATTCCAT
CCCTTCCGTCGTCCATGCATGATGAATGTTTACATCTGCAGCCTGTCCGA
TGCTCCTGAAAATGATGGTGCCGCATCGAGGAGGTTTTTATTGTGTGTCT
TTGCTTACCCCCTGCTGTCGGCTGACTCCCCTCTTGCCTCCTTCTCTATT
TTTTTTTTTTCTTACGTTGGCCCCAGGTAATTCGATGTTTGCTGATCGTC
CCCTTCCCGGAGTCGAGCCTGAACGACGAAGCCGGACGGCTGTTCATGGA
GAGCTACACCGAGTACGAGCGGCGCGTTAAGGTCTGGGTGAACGTCCACG
CGTCCAAGTCTCTGTCGTCGGCCCCGGACGGGGGGGAGGCAACCAGCGGC
GGCGGTAGCAGCGGCAGCGGGGCGGCTATCAAAGGAGGCGTCGTGAAGGC
GGGGGGGAACGGGGATTCAGGAGCGGCGGTGGCAGCAGCGGCGGCGGCAC
CGGCGGCGGCACCGGCGGCGGTCAGTGGGAAGAAGGCGGCCCCATCGGGC
AAGAAGGGATCCTCATCTGCCAAAGTGGCTGGAGGCGGCGGCGCTGCCGG
CGGGGTGGCCGGTGGCAAGCGAAGGGAGGACGCGGGGGCGGCGGCGGCGG
CGGCAGGAGCGGCGGCGGCCCCGAGGAAGACCGTCAAGGACCGTCAAAAG
GAGGCCAAGAAGAAGGGGCTCAAGCGCTTGTAGTGAAGGCGGGGCGTGCC
TGCTGCTCGCTTCTGGCGATGAAGTTTGTTGCTGCTGGTACTGGCCTATA
GACAACCGGGAGCTGCTGATGGTCGTTGTTGATTGTGGGGCTGGTCGATG
CTCCAAAAAGGACGCTTGCTTCAGTGCGCGTTGTCCCTCGAGGAGCGCCG
CTGCGGTGGGGTACGGCTACAGCAGCGGCGCTTGAGTTTACGCCCGCCGT
GTCGAGCCGTGGACAGCCGGCGGGCTGCACCGCCGGTGGCTCGTGTTTGT
CGACGCGGGCTCGGGTGCGTACATGACGTCGTTTTTTCTTGCTTGTGTGT
GTGTGTGTTGCAAAGGAGGAGACGGATCGAGACGTGGCCCATTCCACGTT
TCTTATGCGGGTTTGCATTGGTCAGGTTTGGTCCTTGTTTACAGCAGTGC
CGGCTGGCCTGCGAGGGAGAGAAGCGGACGACATCTACCTGTGAGATCAA
GAATGAGCCCAGATGAGCATTTCTTCCAGCTCCGCACCGCTCTCGATCTC
GGGCTCTAAGTTCGCGTGTATTTTTCACTTTCACGTACGCAGACGGCCTT
TTTAAGTCTTTCGCGGAAGGTGGGTAACTTGATACGAGTATATAAGAATA
AAACCTCTTAGCTCTTGTGGCGTGGCACCATGGCGGTACTATAGGGTATG
TATGGTCGGTATTTTTTTGTGCGTCGGGCCGTGGTTGGGTTGGGTTGGGT
TGGGTTGGGTTCTCGTTTTCCGTGCCTGTTTGGCGTAATAATTATAAGGG
ACCTCGTCGTGGCAGCTTTTTTCTCTGAATGAAGGTGGCGGGTGGCAGGT
TGAACTGCCTATAGCGTGTAGGTGAGGGTTGGTAAGAGAGACGCGACTCA
ATTCTTAGCCTCTGTCGAGCAGGCGTGCTCTCTCTCGCGTGGCTTCTCTG
CCGTTGTAGGGTGTTTTTGTTGTGCTCGAATGGTTCTTTTGTCCGTGTGC
TCATCAGAACCTCGAGAGTGGAGGGGGGGGTCCGCGGACTGGCTAGGTTG
GCGGAGCGCCTGTAGGACGAAGCAGCTATCGAAGTCACTCTCGTGTGAGA
CCCTTTTCCATAGGTGGAGAGGGCTGGTGCTGTGTCGAAAGGTTTGAAGC
TCTGGTAGGAAGAAATATATTGTTACTCAAAGCATATTGTTACTCAAAAC
AAGGTGGATGGGGAGGATACCCCCCTCCTTTTCGCGCTTGTGTGTTTCGG
GTAAATGGTTTCGGGGGTCGATCGCGCTTGCTTGTCGGGATATTTATCTG
TTCGTTCTCTTGTCGTTGTGGTCGTCATTTCTTTGGCCTTCTGTTTACCC
GCCGAAAAAAACGCGGACACGCAGCGATGGCAGAAGCCCTCGGCTTGGCT
TCTTCCGCGGGGAGAAGTGACAGGCGAGCGTCTCCTACAAGCAGAAGCCT
ACAGGAGGTTGATGAGCGAAGTCAGGGACACGCAGCACGTGTTTGCGTTT
GCGTGTGCGTGTATTACTATCTTCTCTCGTTTGCCTGGAAAGCAAGTCCG
CGGTTTGCTATTGGTTAGGAGTACACGAGGGACATCGATTTTTTTTTGCA
TTTCT

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:93654..99558+

>mRNA_E-siliculosus-1a_M_contig99.17750.1 ID=mRNA_E-siliculosus-1a_M_contig99.17750.1|Name=mRNA_E-siliculosus-1a_M_contig99.17750.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1752bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:93654..99558+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGAGCAACAAGAGAAAAATGTCTCTGCTTTCGTCGTTCGAGAACATCTC
ACCCCAGGTCATCAGCCGGGTGGGACGAGAGATTCAAGACCTGCAGCGAA
AATGAGCAACAAGAGAAAAATGTCTCTGCTTTCGTCGTTCGAGAACATCT
CACCCCAGGTCATCAGCCGGGTGGGACGAGAGATTCAAGACCTGCAGCGA
AACCCTCCAGACGGTATCCGCTTCTTGCCCCAGGAAGAGGACACGATCGC
TGAAATCCACGCGGAAATCAAGGGTCCAGCCCTCCAGACGGTATCCGCTT
CTTGCCCCAGGAAGAGGACACGATCGCTGAAATCCACGCGGAAATCAAGG
GTCCAGTCGGGACTCCCTACGATGGTGGGTCCTTCCACATCAAGCTCGTC
CTGAGCAACGATTTCCCGCACTCGCCGCCCAGAGGTTTCTTCCTCACCAA
GATCTACCACCCCAACGTTGCTCCGAACGGTGACATCTGCGTCAACACGC
TCAAGAGAGATTGGACGGCGGAGGTTACTCTGACCCACGTCTTGCAGTCG
GGACTCCCTACGATGGTGGGTCCTTCCACATCAAGCTCGTCCTGAGCAAC
GATTTCCCGCACTCGCCGCCCAGAGGTTTCTTCCTCACCAAGATCTACCA
CCCCAACGTTGCTCCGAACGGTGACATCTGCGTCAACACGCTCAAGAGAG
ATTGGACGGCGGAGGTTACTCTGACCCACGTCTTGCAGGTAATTCGATGT
TTGCTGATCGTCCCCTTCCCGGAGTCGAGCCTGAACGACGAAGCCGGACG
GCTGTTCATGGAGAGCTACACCGAGTACGAGCGGCGCGTTAAGGTCTGGG
TGAACGTCCACGCGTCCAAGTCTCTGTCGTCGGCCCCGGACGGGGGGGAG
GCAACCAGCGGCGGCGGTAGCAGCGGCAGCGGGGCGGCTATCAAAGGAGG
CGTCGTGAAGGCGGGGGGGAACGGGGATTCAGGAGCGGCGGTGGCAGCAG
CGGCGGCGGCACCGGCGGCGGCACCGGCGGCGGTCAGTGGGAAGAAGGCG
GCCCCATCGGGCAAGAAGGGATCCTCATCTGCCAAAGTGGCTGGAGGCGG
CGGCGCTGCCGGCGGGGTGGCCGGTGGCAAGCGAAGGGAGGACGCGGGGG
CGGCGGCGGCGGCGGCAGGAGCGGCGGCGGCCCCGAGGAAGACCGTCAAG
GACCGTCAAAAGGAGGCCAAGAAGAAGGGGCTCAAGCGCTTGTAGGTAAT
TCGATGTTTGCTGATCGTCCCCTTCCCGGAGTCGAGCCTGAACGACGAAG
CCGGACGGCTGTTCATGGAGAGCTACACCGAGTACGAGCGGCGCGTTAAG
GTCTGGGTGAACGTCCACGCGTCCAAGTCTCTGTCGTCGGCCCCGGACGG
GGGGGAGGCAACCAGCGGCGGCGGTAGCAGCGGCAGCGGGGCGGCTATCA
AAGGAGGCGTCGTGAAGGCGGGGGGGAACGGGGATTCAGGAGCGGCGGTG
GCAGCAGCGGCGGCGGCACCGGCGGCGGCACCGGCGGCGGTCAGTGGGAA
GAAGGCGGCCCCATCGGGCAAGAAGGGATCCTCATCTGCCAAAGTGGCTG
GAGGCGGCGGCGCTGCCGGCGGGGTGGCCGGTGGCAAGCGAAGGGAGGAC
GCGGGGGCGGCGGCGGCGGCGGCAGGAGCGGCGGCGGCCCCGAGGAAGAC
CGTCAAGGACCGTCAAAAGGAGGCCAAGAAGAAGGGGCTCAAGCGCTTGT
AG