Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 882 |
| Model size | 883 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936569.4606962-CDS-E-siliculosus-1a_M_contig99:81582..82464 | 1622936569.4606962-CDS-E-siliculosus-1a_M_contig99:81582..82464 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig99 81583..82464 + |
| 1696251135.6611772-CDS-E-siliculosus-1a_M_contig99:81582..82464 | 1696251135.6611772-CDS-E-siliculosus-1a_M_contig99:81582..82464 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig99 81583..82464 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig99.17748.1 >prot_E-siliculosus-1a_M_contig99.17748.1 ID=prot_E-siliculosus-1a_M_contig99.17748.1|Name=mRNA_E-siliculosus-1a_M_contig99.17748.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=294bp
NAGGKTNTCHPCTPHMNEWPREKNMSHPLFFFPVSNRLVTGTTRTPTTTT
ITTTTTALAVRLPNLAGPTWGVLTESPHHREIKPTSMEDDTRKKRSWAIC
ASMGGHRWGEPFRLACPPSRERRAWGSAESVPAAGGPRCSRQDFPGTSEY
HLNSTSIVPPLNHVGHIHTTIPAAAAAAAAATWEIQQRALEATPRTAPEI
PPPSPLLQECHFPSRFFPPHGAFVWYNFFYYVVRRPGRMDHCPPMCTRTR
PPPLPSTSSMPFVWFISKTEELETRHGYVLANISAPVYAHADRH back to topmRNA from alignment at E-siliculosus-1a_M_contig99:81583..82464+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig99.17748.1 ID=mRNA_E-siliculosus-1a_M_contig99.17748.1|Name=mRNA_E-siliculosus-1a_M_contig99.17748.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=882bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:81583..82464+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AACGCGGGCGGAAAGACAAACACCTGCCATCCATGCACACCGCACATGAA
CGAATGGCCTAGAGAGAAAAATATGTCACACCCGTTATTTTTCTTCCCAG
TGTCGAACCGCCTTGTCACTGGAACAACACGAACACCTACCACCACCACC
ATCACCACCACCACCACCGCCCTCGCCGTTCGTCTCCCGAATCTAGCTGG
TCCCACGTGGGGCGTTCTTACCGAATCACCGCATCATCGGGAAATCAAGC
CAACATCTATGGAAGATGACACGCGTAAAAAGCGTAGCTGGGCTATTTGC
GCTTCCATGGGCGGACATCGTTGGGGGGAACCATTTCGTCTGGCGTGTCC
GCCATCTCGAGAAAGACGCGCATGGGGTTCGGCCGAGAGTGTGCCAGCAG
CTGGTGGCCCCCGTTGTTCTCGCCAAGACTTCCCCGGCACATCGGAATAC
CATCTCAATTCCACTTCTATCGTCCCACCCCTTAATCACGTTGGGCACAT
CCACACCACCATTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACATGGG
AGATCCAGCAGAGAGCACTAGAAGCCACACCGAGGACTGCACCGGAGATC
CCGCCACCTTCACCACTATTACAGGAGTGCCACTTTCCGTCACGTTTTTT
CCCTCCGCACGGGGCTTTCGTCTGGTACAATTTTTTTTATTATGTTGTGC
GCCGACCAGGAAGGATGGATCACTGTCCACCGATGTGCACGCGCACGCGC
CCCCCGCCCCTACCTTCCACATCCTCAATGCCCTTCGTTTGGTTTATATC
GAAGACAGAAGAACTCGAAACTCGTCACGGCTACGTTCTTGCGAATATCT
CCGCGCCGGTGTATGCACACGCCGATCGTCAT back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:81583..82464+ >mRNA_E-siliculosus-1a_M_contig99.17748.1 ID=mRNA_E-siliculosus-1a_M_contig99.17748.1|Name=mRNA_E-siliculosus-1a_M_contig99.17748.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1764bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:81583..82464+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AACGCGGGCGGAAAGACAAACACCTGCCATCCATGCACACCGCACATGAA
CGAATGGCCTAGAGAGAAAAATATGTCACACCCGTTATTTTTCTTCCCAG
TGTCGAACCGCCTTGTCACTGGAACAACACGAACACCTACCACCACCACC
ATCACCACCACCACCACCGCCCTCGCCGTTCGTCTCCCGAATCTAGCTGG
TCCCACGTGGGGCGTTCTTACCGAATCACCGCATCATCGGGAAATCAAGC
CAACATCTATGGAAGATGACACGCGTAAAAAGCGTAGCTGGGCTATTTGC
GCTTCCATGGGCGGACATCGTTGGGGGGAACCATTTCGTCTGGCGTGTCC
GCCATCTCGAGAAAGACGCGCATGGGGTTCGGCCGAGAGTGTGCCAGCAG
CTGGTGGCCCCCGTTGTTCTCGCCAAGACTTCCCCGGCACATCGGAATAC
CATCTCAATTCCACTTCTATCGTCCCACCCCTTAATCACGTTGGGCACAT
CCACACCACCATTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACATGGG
AGATCCAGCAGAGAGCACTAGAAGCCACACCGAGGACTGCACCGGAGATC
CCGCCACCTTCACCACTATTACAGGAGTGCCACTTTCCGTCACGTTTTTT
CCCTCCGCACGGGGCTTTCGTCTGGTACAATTTTTTTTATTATGTTGTGC
GCCGACCAGGAAGGATGGATCACTGTCCACCGATGTGCACGCGCACGCGC
CCCCCGCCCCTACCTTCCACATCCTCAATGCCCTTCGTTTGGTTTATATC
GAAGACAGAAGAACTCGAAACTCGTCACGGCTACGTTCTTGCGAATATCT
CCGCGCCGGTGTATGCACACGCCGATCGTCATAACGCGGGCGGAAAGACA
AACACCTGCCATCCATGCACACCGCACATGAACGAATGGCCTAGAGAGAA
AAATATGTCACACCCGTTATTTTTCTTCCCAGTGTCGAACCGCCTTGTCA
CTGGAACAACACGAACACCTACCACCACCACCATCACCACCACCACCACC
GCCCTCGCCGTTCGTCTCCCGAATCTAGCTGGTCCCACGTGGGGCGTTCT
TACCGAATCACCGCATCATCGGGAAATCAAGCCAACATCTATGGAAGATG
ACACGCGTAAAAAGCGTAGCTGGGCTATTTGCGCTTCCATGGGCGGACAT
CGTTGGGGGGAACCATTTCGTCTGGCGTGTCCGCCATCTCGAGAAAGACG
CGCATGGGGTTCGGCCGAGAGTGTGCCAGCAGCTGGTGGCCCCCGTTGTT
CTCGCCAAGACTTCCCCGGCACATCGGAATACCATCTCAATTCCACTTCT
ATCGTCCCACCCCTTAATCACGTTGGGCACATCCACACCACCATTCCAGC
AGCAGCAGCAGCAGCAGCAGCAGCCACATGGGAGATCCAGCAGAGAGCAC
TAGAAGCCACACCGAGGACTGCACCGGAGATCCCGCCACCTTCACCACTA
TTACAGGAGTGCCACTTTCCGTCACGTTTTTTCCCTCCGCACGGGGCTTT
CGTCTGGTACAATTTTTTTTATTATGTTGTGCGCCGACCAGGAAGGATGG
ATCACTGTCCACCGATGTGCACGCGCACGCGCCCCCCGCCCCTACCTTCC
ACATCCTCAATGCCCTTCGTTTGGTTTATATCGAAGACAGAAGAACTCGA
AACTCGTCACGGCTACGTTCTTGCGAATATCTCCGCGCCGGTGTATGCAC
ACGCCGATCGTCAT back to top
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