mRNA_E-siliculosus-1a_M_contig99.17743.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE) HSP 1 Score: 176 bits (447), Expect = 2.180e-43 Identity = 98/110 (89.09%), Postives = 100/110 (90.91%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQ 331 TAALNSGQVDPSNMDEFSSFLQVSSA LRTSYMSAAGY QAHIIGKSVLG VVNSACLGETTEKGAKPSTKKLGARR EFIAEIRASLLKHAGKTR LFRHL+ I + Sbjct: 808 TAALNSGQVDPSNMDEFSSFLQVSSATLRTSYMSAAGYSQAHIIGKSVLGSVVNSACLGETTEKGAKPSTKKLGARR-EFIAEIRASLLKHAGKTRKLFRHLLRWTIVNK 916
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.020e-42 Identity = 89/138 (64.49%), Postives = 104/138 (75.36%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFVD 415 T ALNSGQ+ SN+++FSSFLQVSS LR SYM+AA AH +G VLG VVNSAC GETTEKGA+P KKL ARR+EF EIRASL K++G RLLFR L+ KR A QL EGEKWF W+ TFF D+R F++FVD Sbjct: 624 THALNSGQISGSNLEDFSSFLQVSSTTLRNSYMAAAANTAAHTVGNEVLGAVVNSACTGETTEKGARPYGKKLSARRLEFAGEIRASLAKYSGNGRLLFRALLQKRNASQLAEGEKWFRWENTFFSQSDERLFQRFVD 761
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE) HSP 1 Score: 172 bits (436), Expect = 1.880e-42 Identity = 88/138 (63.77%), Postives = 104/138 (75.36%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFVD 415 T ALNSGQ+ SN+++FSSF+QVSS LR SYM+AA AH +G VLG VVNSAC GETTEKGA+P KKL ARR+EF EIRASL K++G RLLFR L+ KR A QL EGEKWF W+ TFF D+R F++FVD Sbjct: 624 THALNSGQISGSNLEDFSSFIQVSSTTLRNSYMAAAANTAAHTVGNEVLGAVVNSACTGETTEKGARPYGKKLSARRLEFAGEIRASLAKYSGNGRLLFRALLQKRNASQLAEGEKWFRWENTFFSQSDERLFQRFVD 761
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 164 bits (416), Expect = 2.050e-39 Identity = 89/139 (64.03%), Postives = 103/139 (74.10%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFVDG 418 TAALNSGQVDPSN+++F SFLQVSS+ LR+SYMSAAG AH +G VLG VV SA GETTE+G P KL RMEFI EIRASLLKH+G +LLFR LV KR GQL EGEKWF + TF++D +R F +FV G Sbjct: 1180 TAALNSGQVDPSNIEDFGSFLQVSSSTLRSSYMSAAGNSAAHTLGHEVLGSVVTSATSGETTEQGDAPQGPKLRRIRMEFIGEIRASLLKHSGNAKLLFRDLVKKRKVGQLGEGEKWFRSENTFWKDDGERVFLRFVGG 1318
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: D7FZG9_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG9_ECTSI) HSP 1 Score: 159 bits (403), Expect = 1.150e-38 Identity = 88/142 (61.97%), Postives = 104/142 (73.24%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETT-EKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFVDGHV 424 TAALNSGQVDPSN+++F SFLQVSS+ LR+SYMSAAG AH +G VLG VV SA GETT E+G P KL RMEF+ EIRASLLKH+G +LLFR LV KR GQLE+ EKWF + TF++D +R F +FV G V Sbjct: 455 TAALNSGQVDPSNIEDFGSFLQVSSSTLRSSYMSAAGNSAAHALGHEVLGSVVTSATSGETTTEQGDAPQGPKLRRIRMEFVGEIRASLLKHSGNAKLLFRDLVKKRKVGQLEDSEKWFRRENTFWKDDGERVFLRFVGGCV 596
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI) HSP 1 Score: 159 bits (403), Expect = 4.990e-38 Identity = 82/138 (59.42%), Postives = 100/138 (72.46%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFVD 415 T AL+SGQV SN++ FSSFLQVSS+ LR SYMSA G AH +G VLG VVN+AC GETTEKG +P KKL ARR+EF EIRASL + G R LFR ++ KR A QL + E WF W+ TFF +GD+R F++F+D Sbjct: 649 THALSSGQVSASNLENFSSFLQVSSSTLRNSYMSATGNSAAHTVGNQVLGAVVNAACTGETTEKGTRPYGKKLSARRLEFAGEIRASLARFQGNGRRLFREMLQKRNASQLGDTETWFRWENTFFCEGDERLFQRFLD 786
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K) HSP 1 Score: 157 bits (397), Expect = 3.020e-37 Identity = 88/142 (61.97%), Postives = 103/142 (72.54%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETT-EKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFVDGHV 424 TAALNSGQVDPSN+++F SFLQVSS+ LR+SYMSAAG AH +G VLG VV SA GETT E+G P KL RMEF+ EIRASLLKH+G +LLFR LV KR GQL EGE WF + TF++D +R F +FV G V Sbjct: 645 TAALNSGQVDPSNIEDFGSFLQVSSSTLRSSYMSAAGNSAAHTLGHEVLGSVVTSATSGETTTEQGDAPQGPKLRRIRMEFVGEIRASLLKHSGNAKLLFRDLVKKRKVGQLGEGEIWFRRENTFWKDDGERVFLRFVGGCV 786
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: D7FL01_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL01_ECTSI) HSP 1 Score: 155 bits (393), Expect = 3.110e-37 Identity = 79/137 (57.66%), Postives = 103/137 (75.18%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFV 412 T ALN+GQV P+N++ FSSFLQVSSA LR SYMSA + AH +G VLG VVN+AC G TT++GA P KKL +RR+EF+ +IRASL+K+ G RL+FR LV KR AG+L + EKWF +D TFF + +R F++F+ Sbjct: 474 THALNTGQVTPANVENFSSFLQVSSATLRNSYMSAGAHTAAHTLGSEVLGSVVNAACTGATTKEGAAPYGKKLNSRRLEFVEQIRASLVKYGGNGRLMFRDLVQKREAGRLADDEKWFRFDSTFFSEKKERLFQRFL 610
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE) HSP 1 Score: 150 bits (378), Expect = 9.490e-35 Identity = 80/140 (57.14%), Postives = 101/140 (72.14%), Query Frame = 2 Query: 2 TAALNSGQVDPSNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEKGAKPSTKKLGARRMEFIAEIRASLLKHAGKT--RLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFVD 415 ++ALNSGQV+ +N+++FSSFLQVSSA LR SYM+A AH +G VLG V N AC GETTE+ +P KKL A+R EF A+I+A L KH G T R +FR L+ KR A QL E EKWF W+ TFF +GD+R F++FVD Sbjct: 662 SSALNSGQVNSNNLEDFSSFLQVSSATLRNSYMAATANTAAHTLGNEVLGAVSNMACTGETTERANRPYGKKLCAKRNEFSADIQAYLAKHRGTTTSRKVFRALIRKRAASQLLEDEKWFRWENTFFGEGDERLFQRFVD 801
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Match: A0A6H5K1E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E4_9PHAE) HSP 1 Score: 147 bits (370), Expect = 5.400e-34 Identity = 82/137 (59.85%), Postives = 96/137 (70.07%), Query Frame = 2 Query: 11 LNSGQVDP--SNMDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEKGAKPSTKKLGARRMEFIAEIRASLLKHAGKTRLLFRHLVSKRIAGQLEEGEKWFMWDRTFFEDGDDRNFKKFVD 415 L +DP SN+D FSSFLQVSS LR SYM+AA AH +G +LG VVNSAC GETTEKGA+P KKL ARR+EF +IRASL K +G RLLFR + KR A QL EGEKWF + TFF D+R F++FVD Sbjct: 522 LGISNLDPIGSNLD-FSSFLQVSSTTLRNSYMAAAANTAAHTVGNELLGAVVNSACTGETTEKGARPYGKKLSARRLEFAGDIRASLAKFSGNGRLLFRAFLQKRNASQLVEGEKWFRRENTFFSQSDERLFQRFVD 657 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig99.17743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 14 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig99.17743.1 >prot_E-siliculosus-1a_M_contig99.17743.1 ID=prot_E-siliculosus-1a_M_contig99.17743.1|Name=mRNA_E-siliculosus-1a_M_contig99.17743.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=131bp MDEFSSFLQVSSARLRTSYMSAAGYGQAHIIGKSVLGGVVNSACLGETTEback to top mRNA from alignment at E-siliculosus-1a_M_contig99:12087..13729+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig99.17743.1 ID=mRNA_E-siliculosus-1a_M_contig99.17743.1|Name=mRNA_E-siliculosus-1a_M_contig99.17743.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1643bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:12087..13729+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig99:12087..13729+ >mRNA_E-siliculosus-1a_M_contig99.17743.1 ID=mRNA_E-siliculosus-1a_M_contig99.17743.1|Name=mRNA_E-siliculosus-1a_M_contig99.17743.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=786bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig99:12087..13729+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |