Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
A0A6H5KHW4_9PHAE (Prohibitin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW4_9PHAE)
HSP 1 Score: 569 bits (1467), Expect = 5.560e-196
Identity = 293/301 (97.34%), Postives = 298/301 (99.00%), Query Frame = 2
Query: 410 MSGAAKAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMGGTKKSSWR 1312
MSGAAKAAFNKIP+ GPLLPLINGALVLGA+GYCGYNSVFTVDGGHRAIVFNRLSGVKEGVM EGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQ+RAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSER+KYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMGG+KK SWR
Sbjct: 1 MSGAAKAAFNKIPSGGPLLPLINGALVLGALGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERSKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMGGSKKPSWR 301
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
D7G0Y3_ECTSI (Prohibitin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y3_ECTSI)
HSP 1 Score: 468 bits (1205), Expect = 6.460e-156
Identity = 246/259 (94.98%), Postives = 250/259 (96.53%), Query Frame = 2
Query: 425 KAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVAR 1201
+AAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYD SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKA+GEAQSAKLVGEAIKDNPGFIQLRRIDAA++IASTVAR
Sbjct: 53 QAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAEGEAQSAKLVGEAIKDNPGFIQLRRIDAAKEIASTVAR 302
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
A0A6T5MRB1_HETAK (Prohibitin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MRB1_HETAK)
HSP 1 Score: 388 bits (996), Expect = 2.910e-125
Identity = 195/301 (64.78%), Postives = 249/301 (82.72%), Query Frame = 2
Query: 410 MSGAAKAAFNKIPN-SGPLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMGGTKKSSW 1309
M+ A AA +P+ GPL L+ AL +G +GY GYNS +TV+GGHRA+ FNRL+G+ E V EGMHF++PW E P +YDVRT+PRN+QSLTGSKDLQMV+ITLRVL+KP+P LP IYRRLG DYDERVLPSIVNEVTK+VVA+YNASELLTKREAVS+ + L RA DFGI+++D +ITHLSFSREYT AVEAKQVAQQD+ERAKYVV+KA+QEK+SIV+KAQGEA++A+L+G AI+DNPGF+QLR+IDAA++IA T+A+S+N++FL++D+LL+ ++G+ + G KK W
Sbjct: 1 MNSAKDAARKMMPSPGGPLFGLLKTALGIGVMGYAGYNSFYTVEGGHRAVKFNRLTGIGEKVYEEGMHFMVPWLERPIVYDVRTRPRNLQSLTGSKDLQMVNITLRVLSKPNPATLPMIYRRLGTDYDERVLPSIVNEVTKSVVARYNASELLTKREAVSREVAQRLMARARDFGILLDDVSITHLSFSREYTNAVEAKQVAQQDAERAKYVVDKAKQEKLSIVLKAQGEAEAAQLIGTAIQDNPGFVQLRKIDAAKEIAETLAKSSNRVFLDSDALLVTMLGEDTLTQAKSGGKKKKGLW 301
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
A0A7S2XX85_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX85_9STRA)
HSP 1 Score: 375 bits (962), Expect = 2.530e-120
Identity = 192/281 (68.33%), Postives = 235/281 (83.63%), Query Frame = 2
Query: 419 AAKAAFNKI--PNSGPLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVG 1255
AAK A K+ N+GP ++ AL +G +GY GYNSV TV+GGHRAI F+R G+ EG+ F+IPW E P IYDVRT+PRN+QSLTGSKDLQMV++TLRVL+KPDP L FIYRRLG DYDERVLPSIVNEV+K+VVA+YNASELLTKREAVS+ + L +RA DFGI+++D +ITHLSFSREYTAAVEAKQVAQQD+ERAKYVV+KA QEK SI++KAQGEAQSA+LVG+AI+DNPGF+QLR IDAARDI++ VA+S N+++LN D+LLL+ +G
Sbjct: 5 AAKEAAKKMMPKNTGPFFAIVKAALGIGVLGYAGYNSVHTVEGGHRAIKFSRFGGIGSMTYGEGLLFVIPWLERPIIYDVRTRPRNLQSLTGSKDLQMVNLTLRVLSKPDPNNLHFIYRRLGIDYDERVLPSIVNEVSKSVVARYNASELLTKREAVSREVASLLTKRARDFGILLDDVSITHLSFSREYTAAVEAKQVAQQDAERAKYVVDKAIQEKRSIILKAQGEAQSAELVGKAIRDNPGFVQLRMIDAARDISTIVAKSTNRVYLNADNLLLNTLG 285
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
A0A835Z7Y4_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y4_9STRA)
HSP 1 Score: 375 bits (962), Expect = 2.620e-120
Identity = 196/294 (66.67%), Postives = 247/294 (84.01%), Query Frame = 2
Query: 419 AAKAAFNKIPNSG-PLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEG---VMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMG 1288
A + AF+K+P G P+ ++ AL +GA+G GYNSVFTV+GGHRAIVFNR+SG+K+G +EGMHF+IP EWP I+DVRT+P + +LTGSKDLQMV++TLRVL KP+ +LPFIYRRL ++YD+RVLPSI+NEV KAVVAKYNASELLTKRE VSK+IR+AL RA DF I ++D AITHL+FSREYTAA+EAKQVAQQD+ERAKYVV KA QEKMSIV+KA+GEA+SA L+G+AIKDNPGF+QLRRIDAAR+IA+TV++ N+L+L+T +L+LDL G G+ +T+G
Sbjct: 2 AGRMAFDKMPQGGGPIGAVLKAALGVGALGVAGYNSVFTVEGGHRAIVFNRISGIKDGPENTYSEGMHFVIPGMEWPIIFDVRTRPHQLTTLTGSKDLQMVNVTLRVLHKPNLTQLPFIYRRLHQNYDDRVLPSIINEVLKAVVAKYNASELLTKREDVSKSIREALTLRARDFMIELDDVAITHLAFSREYTAAIEAKQVAQQDAERAKYVVMKAVQEKMSIVLKAKGEAESAALIGKAIKDNPGFLQLRRIDAAREIATTVSKGTNRLYLDTKALMLDL---GAEGVLTTVG 292
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
F0XYI2_AURAN (Prohibitin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYI2_AURAN)
HSP 1 Score: 357 bits (916), Expect = 3.760e-113
Identity = 188/314 (59.87%), Postives = 244/314 (77.71%), Query Frame = 2
Query: 401 SGIMSGAAKAAF-----------NKIPNSGPLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMGGTKKSSW 1309
+G+ S A++ +F +++P GP L++ + AVG+ GYNSVFTV GG RA++++R+SGVK+ V AEGMH +P E+P +DVRT+PRNVQSLTGSKDLQMV+ITLRVL+KP+ +L +IY+RLG DYD+RVLPSIVNEVTKAVVA YNASELLTKRE VS IR L RA DF I+++D +ITHLSFS EYTAAVEAKQVAQQDSERA+Y+VEKA QEK SI++KA+GEAQSA+L+G+AI++NPGF++LR+ID A++IA TVARS K++LN DSLL++++G G ++ KK W
Sbjct: 4 AGLKSFASRRSFATVRDKLNELGSQMPQGGPPTGLVSAVAGISAVGFLGYNSVFTVQGGQRAVLWSRISGVKDAVYAEGMHPRVPLIEYPVPFDVRTRPRNVQSLTGSKDLQMVNITLRVLSKPNTSELAWIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSNEIRHRLVVRAADFRIILDDVSITHLSFSHEYTAAVEAKQVAQQDSERARYIVEKAIQEKKSIIVKAEGEAQSARLIGKAIQNNPGFVKLRKIDTAKEIAGTVARSQGKVYLNADSLLINILGNEQLGEDTS---AKKRGW 314
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
A0A7S3ZNB9_9STRA (Prohibitin n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNB9_9STRA)
HSP 1 Score: 347 bits (891), Expect = 2.570e-109
Identity = 180/274 (65.69%), Postives = 227/274 (82.85%), Query Frame = 2
Query: 470 LINGALVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMGG 1291
LI + AVGY GYNSVFTV+GG RA++++R+ GVK V EGMH IP E+P +DVRT+PRNVQSLTGSKDLQMV++TLRVL P+ +LP+IY LG DYD+RVLPSIVNEVTKAVVA+YNASELLTKREAVS IR AL +RA DF IV++D A+THLSFS EYTAAVEAKQVAQQ++ERA+YVVEKA QEK SI++KA+GEA+SA+LVG+AI+DNPGF++LR+ID A++IA+TVAR+ K++LN+DSLL++++G+ + T G
Sbjct: 46 LIGAVAGVSAVGYVGYNSVFTVEGGQRAVLWSRVQGVKPAVYGEGMHPRIPLIEYPVHFDVRTRPRNVQSLTGSKDLQMVNVTLRVLFYPNKQELPWIYTMLGHDYDDRVLPSIVNEVTKAVVARYNASELLTKREAVSNEIRYALTKRAADFRIVLDDFALTHLSFSNEYTAAVEAKQVAQQEAERARYVVEKAIQEKKSIIVKAEGEAESARLVGKAIQDNPGFVKLRKIDTAKEIATTVARNQGKVYLNSDSLLINVLGEKNLADDETKKG 319
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
W7TL69_9STRA (Prohibitin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL69_9STRA)
HSP 1 Score: 343 bits (881), Expect = 5.150e-108
Identity = 182/268 (67.91%), Postives = 225/268 (83.96%), Query Frame = 2
Query: 452 SGPLLPLINGALVLGAVG--YCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDL 1249
+GPL GAL LG G Y GYNS +TV+GGHRA++FNRL GVKE V EGMHF+IPWF+ P IYD+R KPR +QSLTGSKD+QMV+IT+RVL+KPD +L +I+R LG+DYDERVLPSIVNEV+KAVVAKYNA+ELLTKRE VS IR L++RA +F IV++D +ITHL+FSREYT AVEAKQVAQQ++ERAKYVV KA QEK +I+IKA+GEAQSA LVG+AI++NP FI+LR+IDAARDIA+ V+ S K++L+ DSLLL++
Sbjct: 40 AGPL-----GAL-LGVTGILYAGYNSFYTVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREMVSTQIRLQLEKRAKEFRIVLDDVSITHLTFSREYTNAVEAKQVAQQEAERAKYVVMKANQEKEAIIIKAEGEAQSAALVGKAIRENPAFIKLRKIDAARDIANVVSSSGQKVYLSADSLLLNM 301
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
A0A7S3NH81_9STRA (Prohibitin n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NH81_9STRA)
HSP 1 Score: 342 bits (877), Expect = 3.810e-107
Identity = 180/283 (63.60%), Postives = 232/283 (81.98%), Query Frame = 2
Query: 473 INGALV-LGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMG----GTKKSS 1306
I ALV +G +G+ GYNS FTV GG RA++++R++GVKE V EGMH IP E+P +DVRT+PRNVQSLTGSKDLQM++ITLRVL+KP LPFIY+RLG DYD+RVLPSIVNEVTKAVVA YNASELLTKRE VS+ IR+ L RR+ DF IV+ED +ITHLSFS EYTAAVEAKQVAQQD+ER++Y+VEKA QEK SI++KA+GEAQSA L+G+AI++NPGF+QLR+I+ A++IAST+AR+ ++++L+ ++LLL+ +G + ++ GTK SS
Sbjct: 40 IMSALVGIGGLGFLGYNSFFTVQGGERAVLWSRIAGVKESVYNEGMHPKIPLIEYPISFDVRTRPRNVQSLTGSKDLQMINITLRVLSKPSIPDLPFIYKRLGHDYDDRVLPSIVNEVTKAVVACYNASELLTKREQVSQEIRNRLLRRSADFRIVLEDVSITHLSFSSEYTAAVEAKQVAQQDAERSRYIVEKAIQEKKSIIVKAEGEAQSATLIGKAIQNNPGFVQLRKIETAKEIASTIARAQSRVYLDANNLLLNALGNENLATETVPATKSKGTKSSS 322
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Match:
A0A7S4JTY1_9STRA (Prohibitin n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JTY1_9STRA)
HSP 1 Score: 339 bits (870), Expect = 2.750e-106
Identity = 171/275 (62.18%), Postives = 221/275 (80.36%), Query Frame = 2
Query: 485 LVLGAVGYCGYNSVFTVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRRAGDFGIVMEDTAITHLSFSREYTAAVEAKQVAQQDSERAKYVVEKARQEKMSIVIKAQGEAQSAKLVGEAIKDNPGFIQLRRIDAARDIASTVARSNNKLFLNTDSLLLDLVGQGDAGIKSTMGGTKKSSW 1309
+ GA+GY Y+SV+ V+GG RA+VFNR++G+K+ V EG++F IPWFEWPYIYD+RT+P N+Q+LTGSKDLQMV+I +RVL KPDP +L ++Y+ LGK+YDER+LPS++NE KAVVAKYNASELLTKR VS +I L RA F +++ED AITHL+FS EY+ AVEAKQVAQQD+ERAKY+V A+QEK +I+ KA+GEA+SA+L+G ++K NPGF++LRRIDAARDIA VA S NK++LN DSLLL+L+G D + TM KK W
Sbjct: 45 IAAGALGYGAYSSVYNVEGGKRAVVFNRVTGMKDQVYGEGLNFNIPWFEWPYIYDIRTRPCNLQTLTGSKDLQMVTIGVRVLHKPDPSQLVWLYQHLGKNYDERILPSLMNECAKAVVAKYNASELLTKRSQVSADISRELMNRAKGFNVLLEDVAITHLAFSPEYSRAVEAKQVAQQDAERAKYIVIGAQQEKQTIITKARGEAESAELIGLSVKKNPGFMKLRRIDAARDIADIVAGSGNKVYLNADSLLLNLMGDTDEKFEKTMS-EKKRGW 318
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17727.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 25
0 1 Expect = 5.56e-196 / Id = 97.34 Expect = 6.46e-156 / Id = 94.98 Expect = 2.91e-125 / Id = 64.78 Expect = 2.53e-120 / Id = 68.33 Expect = 2.62e-120 / Id = 66.67 Expect = 3.76e-113 / Id = 59.87 Expect = 2.57e-109 / Id = 65.69 Expect = 5.15e-108 / Id = 67.91 Expect = 3.81e-107 / Id = 63.60 Expect = 2.75e-106 / Id = 62.18 Sequence A0A6H5KHW4_9PHAE D7G0Y3_ECTSI A0A6T5MRB1_HETAK A0A7S2XX85_9STRA A0A835Z7Y4_9STRA F0XYI2_AURAN A0A7S3ZNB9_9STRA W7TL69_9STRA A0A7S3NH81_9STRA A0A7S4JTY1_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 906 Model size 2574 Exons 9 Hectar predicted targeting category other localisation BRITE ko00000,ko03029,ko04147 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. O EggNOG OGs COG0330@1,KOG3090@2759 EggNOG free text desc. thelarche GOs GO:0000001,GO:0000003,GO:0000060,GO:0000819,GO:0001101,GO:0001302,GO:0001666,GO:0001763,GO:0001932,GO:0001934,GO:0002009,GO:0002082,GO:0003006,GO:0003008,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005747,GO:0005773,GO:0005774,GO:0005911,GO:0006140,GO:0006355,GO:0006457,GO:0006606,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006851,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007049,GO:0007059,GO:0007062,GO:0007088,GO:0007096,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007548,GO:0007568,GO:0007569,GO:0007588,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008285,GO:0008406,GO:0009506,GO:0009507,GO:0009536,GO:0009611,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016363,GO:0017038,GO:0019219,GO:0019220,GO:0019222,GO:0019866,GO:0019867,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022612,GO:0023051,GO:0023056,GO:0023057,GO:0030001,GO:0030054,GO:0030154,GO:0030162,GO:0030312,GO:0030331,GO:0030421,GO:0030879,GO:0030964,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031536,GO:0031647,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033218,GO:0033365,GO:0033554,GO:0033599,GO:0033600,GO:0033993,GO:0034220,GO:0034399,GO:0034504,GO:0034613,GO:0035239,GO:0035257,GO:0035258,GO:0035295,GO:0035632,GO:0036293,GO:0036294,GO:0040008,GO:0040014,GO:0040018,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042695,GO:0042886,GO:0042981,GO:0043051,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043410,GO:0043433,GO:0043467,GO:0044092,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044703,GO:0045136,GO:0045137,GO:0045184,GO:0045271,GO:0045787,GO:0045840,GO:0045861,GO:0045892,GO:0045927,GO:0045931,GO:0045934,GO:0045937,GO:0046543,GO:0046907,GO:0047485,GO:0048232,GO:0048308,GO:0048311,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048729,GO:0048731,GO:0048732,GO:0048754,GO:0048856,GO:0048869,GO:0050678,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050821,GO:0050896,GO:0051090,GO:0051091,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051276,GO:0051427,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0055044,GO:0055085,GO:0060255,GO:0060259,GO:0060429,GO:0060443,GO:0060444,GO:0060548,GO:0060562,GO:0060603,GO:0060688,GO:0060744,GO:0060749,GO:0060762,GO:0061138,GO:0061180,GO:0061377,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070372,GO:0070374,GO:0070469,GO:0070482,GO:0070584,GO:0070588,GO:0070727,GO:0070838,GO:0070887,GO:0071229,GO:0071300,GO:0071310,GO:0071396,GO:0071453,GO:0071456,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072511,GO:0072594,GO:0080090,GO:0090068,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0098813,GO:1900542,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902806,GO:1902808,GO:1903506,GO:1903507,GO:1903578,GO:1903998,GO:1905330,GO:1990204,GO:2000026,GO:2000027,GO:2000112,GO:2000113,GO:2001141 KEGG ko ko:K17081 Preferred name PHB2 Seed eggNOG ortholog 2880.D7G0Y3 Seed ortholog evalue 1e-130 Seed ortholog score 473.0 Taxonomic scope Eukaryota
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936566.7828135-UTR-E-siliculosus-1a_M_contig98:556603..557862 1622936566.7828135-UTR-E-siliculosus-1a_M_contig98:556603..557862 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig98 556604..557862 - 1696251134.2895367-UTR-E-siliculosus-1a_M_contig98:556603..557862 1696251134.2895367-UTR-E-siliculosus-1a_M_contig98:556603..557862 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig98 556604..557862 - 1622936566.9998202-UTR-E-siliculosus-1a_M_contig98:564833..565242 1622936566.9998202-UTR-E-siliculosus-1a_M_contig98:564833..565242 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig98 564834..565242 - 1696251134.4333444-UTR-E-siliculosus-1a_M_contig98:564833..565242 1696251134.4333444-UTR-E-siliculosus-1a_M_contig98:564833..565242 Ectocarpus siliculosus Ec864m_EcPH12_78m male UTR E-siliculosus-1a_M_contig98 564834..565242 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622936566.8296764-CDS-E-siliculosus-1a_M_contig98:557862..557977 1622936566.8296764-CDS-E-siliculosus-1a_M_contig98:557862..557977 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 557863..557977 - 1696251134.3099077-CDS-E-siliculosus-1a_M_contig98:557862..557977 1696251134.3099077-CDS-E-siliculosus-1a_M_contig98:557862..557977 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 557863..557977 - 1622936566.8501718-CDS-E-siliculosus-1a_M_contig98:558936..559070 1622936566.8501718-CDS-E-siliculosus-1a_M_contig98:558936..559070 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 558937..559070 - 1696251134.3212488-CDS-E-siliculosus-1a_M_contig98:558936..559070 1696251134.3212488-CDS-E-siliculosus-1a_M_contig98:558936..559070 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 558937..559070 - 1622936566.867016-CDS-E-siliculosus-1a_M_contig98:559825..559885 1622936566.867016-CDS-E-siliculosus-1a_M_contig98:559825..559885 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 559826..559885 - 1696251134.3299453-CDS-E-siliculosus-1a_M_contig98:559825..559885 1696251134.3299453-CDS-E-siliculosus-1a_M_contig98:559825..559885 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 559826..559885 - 1622936566.8832762-CDS-E-siliculosus-1a_M_contig98:560403..560532 1622936566.8832762-CDS-E-siliculosus-1a_M_contig98:560403..560532 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 560404..560532 - 1696251134.3455384-CDS-E-siliculosus-1a_M_contig98:560403..560532 1696251134.3455384-CDS-E-siliculosus-1a_M_contig98:560403..560532 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 560404..560532 - 1622936566.9002514-CDS-E-siliculosus-1a_M_contig98:561296..561391 1622936566.9002514-CDS-E-siliculosus-1a_M_contig98:561296..561391 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 561297..561391 - 1696251134.3631532-CDS-E-siliculosus-1a_M_contig98:561296..561391 1696251134.3631532-CDS-E-siliculosus-1a_M_contig98:561296..561391 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 561297..561391 - 1622936566.9173384-CDS-E-siliculosus-1a_M_contig98:562182..562288 1622936566.9173384-CDS-E-siliculosus-1a_M_contig98:562182..562288 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 562183..562288 - 1696251134.3727093-CDS-E-siliculosus-1a_M_contig98:562182..562288 1696251134.3727093-CDS-E-siliculosus-1a_M_contig98:562182..562288 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 562183..562288 - 1622936566.9384263-CDS-E-siliculosus-1a_M_contig98:563175..563318 1622936566.9384263-CDS-E-siliculosus-1a_M_contig98:563175..563318 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 563176..563318 - 1696251134.383536-CDS-E-siliculosus-1a_M_contig98:563175..563318 1696251134.383536-CDS-E-siliculosus-1a_M_contig98:563175..563318 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 563176..563318 - 1622936566.9561675-CDS-E-siliculosus-1a_M_contig98:564286..564392 1622936566.9561675-CDS-E-siliculosus-1a_M_contig98:564286..564392 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 564287..564392 - 1696251134.4045722-CDS-E-siliculosus-1a_M_contig98:564286..564392 1696251134.4045722-CDS-E-siliculosus-1a_M_contig98:564286..564392 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 564287..564392 - 1622936566.976651-CDS-E-siliculosus-1a_M_contig98:564815..564833 1622936566.976651-CDS-E-siliculosus-1a_M_contig98:564815..564833 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 564816..564833 - 1696251134.4221783-CDS-E-siliculosus-1a_M_contig98:564815..564833 1696251134.4221783-CDS-E-siliculosus-1a_M_contig98:564815..564833 Ectocarpus siliculosus Ec864m_EcPH12_78m male CDS E-siliculosus-1a_M_contig98 564816..564833 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17727.1
>prot_E-siliculosus-1a_M_contig98.17727.1 ID=prot_E-siliculosus-1a_M_contig98.17727.1|Name=mRNA_E-siliculosus-1a_M_contig98.17727.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=302bp
MSGAAKAAFNKIPNSGPLLPLINGALVLGAVGYCGYNSVFTVDGGHRAIV back to top mRNA from alignment at E-siliculosus-1a_M_contig98:556604..565242-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig98.17727.1 ID=mRNA_E-siliculosus-1a_M_contig98.17727.1|Name=mRNA_E-siliculosus-1a_M_contig98.17727.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8639bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:556604..565242- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)CGAAACAAAAATGAGGTCGTCTGCTGTAGGGAGGGTGATAACGACATGTT
CTTGACCTCTTGACCCCTACACCACACGACGCACGTCTCCTGCACACGCT
CCGTGTAACCCAAGAGCCCTGTGGGTCGAAGTACGGGTCACCAACCTGAG
CAACACCGACACTCACACTTGCAAATGTGGGAGCAAAAATACCAAACAAC
CGCATTTGTGGCAGAACCCCGGTTATGTTCTTGGAACGACTGCCCCCGAA
CCCCCATCGCCTTACATTTTCGAGGCGCTGTTGAACCCAACTCAGCGCTG
TTGTTGTTGTCGTTTGTGCTGTGCTGGATCCCTCGTCAAATCGAACTCCT
TGTCGCTCTTACTCCTCCCCGGACAGAGCCAGCTGTAGCGGCGGGGCACA
AGCGGCATC ATGTCTGGAGCTGCGAAG GTGCGGCAGATTTGGACCACGTT
TTGGGATTGTTGTTTCTGCTGCTACCGTTTGTTGCTGCTTTACAGTTGTT
GTTTTACAGTTGTTGTTGGTGGTGGTGGTGCTGCTGCTGCTGCTGCTGCT
GCTGCTTTCTCTACTTTTTGTGACACGGTATTGCCGTATTGTGGCCTCCG
TATTTCACAAGGCTGCTGCGGTTGTGATGACGAGTCCATATGTACCGAAC
CGGGTAGTCGCTCGAGAATCCTTTGCGTGAACGCCCCTACGTACATACCT
TAGTTTCCCAGGCTAAGTCGCAAACGAAAACAAGTGGGAGCCTAAGCGTT
TGGCTCTTCTCATGACACCAGTGACCGACGGCACCAGCGAACCCCGCTGC
AAAGGATTTGGCAGCTAATATATATCCTCGTGTGGGCGATGTTTTTGCAG
GCCGCGTTCAACAAAATCCCAAACAGTGGGCCCCTCCTGCCCCTCATCAA
CGGCGCGTTGGTGCTGGGAGCGGTGGGCTACTGCGGGTACAACTCGGTAT
TCACCG GTGAGGGGATGTCCTCGCGGTAGCGATGGTGTTGTTGCGGTTCG
GGCCGTTATAGCGACGGAAGAAGCTGCTGGAATCGAACCGTTTTCTTCTC
TGCCATCCCCCCTCCCAACTTGAACGGAGCGCCTCACGCGGACAAGAGGC
ACGCGGCCAAGTCTATGTAGAGCTGCTGCATACGGACATTCCATTTCGGC
GGTGTATCCACTTGTGGTGTTGGTGCCGACGCCGCTGTGATATGTTGGCA
CGACTGAGTAGTCTAATGGGTAAGCCTTTCTAACGTCCTCGCTTTCAGGA
CTTCGCTGTCTGCTCCTCCTCAAGAATATTGTCCTCAATGCGGGGGAGTG
TCCTTAGAATCATTCACCGCCCTTTTTCTATGTTCTGCGGGGGACCTTAC
ATATTTTTACGCTACGGTGTCCTCAAAAGCTGGGAGTGTCGTTAGGGTTG
GGGTCCTGGAAGTGGGGAAGACTCTACTATAGAAAGGCAGGGCCAACGGT
TGTGTGGTCTACTGGTGGGGGTGGTAGTGGTGGTGATATCGTTAGCGTGG
GGGCCTCGGCGATGGCCGTTGTTGCGTGGCTTGGCTGCTGTTCGCCACCG
TTTCTTGCAGCCAGCCATATGCCTTGGTCGCCCCCCCCCCACACACGCAG
TTTCACGAGCGCTGCTCCTCTTGGTTGCCGTGGTTTGGTTTGAAGACATT
CGGTGCCTTGGTCGCCCCGCACACAATTTGCCTCGGTCTCAGGGCACTCT
CTCGTTTCTCTGAGTGGCCATGAAGGAAGTTCGCTGCCTCGGAGCTAGCG
TTGCCTACTGAACCGTGTTCGCATTTCGGAACGATTGCCGCGAACGAAGT
ACTATGTTTAGGGTTAACCCCCAACAACAGGAAACACAACTCCTGTATTT
CGACCGTTATGTGCATAGCACCCGGCGTATTGTTAACTTGCTGGTGCTCC
ATTCCGGATCGGCGTCTTGAGCAGTGGATGGCGGGCACCGTGCGATCGTG
TTCAACCGGCTGAGCGGGGTGAAGGAGGGGGTCATGGCGGAGGGGATGCA
CTTCATCATCCCCTGGTTCGAGTGGCCTTACATCTACGACGTGCGCACGA
AGCCGCGTAACGTTCAG GTGAAGAAAAGGGGGGGAGGGGGGGAGGGTACT
GAAGAAGGGGGCGGCTGTACCCATGTAAAAGCATGCCGCAGTCGTTGGAC
TATTGGGGGGGGGGGATTCTGGCCGTCAAAGTGCAAAAAGAAATATACCG
AGCATGTGACGAACAGCTTTCGTGAGACCGGGATGACTTTTCTCGTCCCC
CCGTAACCTTCTTATTTTGTTCTTGGGGTTGGTTCACAGGTCGACAGATA
CAGGCCTCTTGTTCCGGCGTGAACTAGAATCTGGATGGGATTCGTGATTG
GTTGAAATAATCTACAAAGTCGTGAGGGGTCTGACCCATTTTATTTTTTT
GCCCTTAACATGTGTGGGTTAATATTTGCTCAAGAGGGGGGAAACCATGC
CGCCATTGCATGGGCTTTGGTCTCAAAAGAGACGGAGTAAACGGTGGAGG
TCCAGTTGAGTTCGCCGCTTGACGTCAGAGTGTGGCAAGACAGTGCTGAG
AGATGCAGCTTCAGGAAAAACTTGCGGCGACATATTTCAGTTGTTTGTCT
GCAGGACGTCGCGTTCTACCTTTGCCACCAATGTTGACCTGTGAATCGAT
CGCGGATTTTGATCACGGCTGGTTTAATACTTGTCGTGTCACGTGGCACG
CTATGTGGCTTGACCGCAAATCCTGCAAATTGTGCGTCGTCTCGTGTCGC
CAACGACCTGCCCCCCCCCCCGAGAGGATGGATAGACTAGGGAAGCCATT
TTTGAGCAACCTTTGGCAAAGTAGGAACGAACGATTGACCATCGGTGATC
GGTCCTGTGGGAACAATGCTCGGACGCGTGGTCAATGGTCTAAACCGCCA
AGGCATGCCAAACATAAGAGTACGCCCCCTCCCCCCCCGCCCGTTTCTTT
TCAGTCGCTAACTGGGTCGAAGGACTTGCAAATGGTGAGCATCACGCTCC
GTGTGCTGACCAAGCCCGATCCCTTCAAGCTCCCCTTCATCTACCGCAGG
TTGGGCAAGG GTAAGTGTAGTCCTCCTCGTCGTTGTCCTTTCCATGTTTC
TCAAGTTGTAGCTGCCGTAACGAAGCACTTGCGGCTGAGAGGTCGAGCAT
AGCTGCCGTAACGAAGCACTCGGGGCTGAGATGTTAGGGCGTCCCGACAC
TGCCGGCGGGTGTCCTCTTTAGATGTGTCAAGCGCTTGTGACCCGCGCTT
AGCAGGCACCCGCATTATTGTTCTTTTACCTTAAACCATCCTAGTTGTTC
CATCTGTGCCAGCCATTTTTCACCCGTACTAGTATAGGGCACCAGTACCA
TCCATTGCGTTAACCATCCTGGCTGTTCCATCTGTACCAGCCAATTTCAC
CCCCGGTATTATGGCGCACCCGACTGCACTGTTGTTGCGTAGGGTCGCTC
ACTGGTTTGTGCTTTCTGTACGTGTGCCTGGCTGTGTTGCTTCCATGCGT
CGCCCGTGACTGCCGCCGTGCATGGCCCCGGGAACCGATTGCGCAGGCGA
CCACGTTTGCAGAAGTGGATCGTCGAGAGCTTCCTTTTTTTTCGCAAGTT
CACCCCTGTTTCGGACGGCTTCCGCTCCGCTTCTCACATAATCCCTGACT
CGCCTTTTGCCACCTCCTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTATTGTGTTGTGTGTGTTGTGTTTTGTTTTGTTTT
TTGCTGCTGCTGCCACTGCCGCTGCTGCTCCTCCTGCTGGTGTTTTGTAT
ATGTGTGTGTGTTTCTTGGGGTACGGGCACTCCGTGGACCGACCAAACCA
GACTACGACGAGCGTGTCCTGCCTTCCATCGTGAACGAGGTGACCAAGGC
CGTGGTCGCTAAGTACAACGCCTCCGAGCTCCTCACCAAGCGAGAG GTGA
GTTGAGTCTCAACCGCCATTTTGGCACATGACCCCCGTCACGGACGCTCC
CGACCTACGATGCCCCCTATTGTCCCTAGGTACAACGCCACCGTGGGCGG
GAGCTGAGTGTCAACCGCATGTCATACCGCGGACGCCATGCCGTTTTGCA
CTTGACCCCCCTACACGGACCTTCCCAATCTGCGATTTCCCCTTCCGTTG
AAGAAACGGAAGAGCGCCAAGGCGGATAGTGGTTTTGTCGCTGGCATTTG
GCTCGATGGCGTTCGGTGCTCTCTGCAAGTTGGCTCGTGTTAAGATAGCA
GTTCGTTGCATCACCGTGACAACGACGAAATAAGATCGCTGTGTCCAGGT
GTAGTACAGAGAAGTTCAGGGAAAACACTGGATTTGTATGAAAGAAGAGA
GGGAAAGTGACAGGGATGGGTTTTGCAATGTGTGCAGGATTCGAGATTTC
ACGGGGGGGGGGGTGGCGCGGGTTGTCTCCTGCCTTGGTTTGGTTTGTCC
TCGTGCCAACCACGTGCCCCACGCCTTGGAGTTGCCCACATCTACAGTAT
CGATCAAGCAGCCTTCGTAAACATGCTGGATGAAGCATGTAATAGGGGAA
GTTGGGATAGGGTCAGGGGTAGGGATATATGGTGTGCGTACCCCCTCCCT
GTTCGTTTTTTCCGACTTTATTCCTAGCGAAGGCAGTCCCATCGATCCGG
CGTTTTCCGTGTCATTGTTTCATGTTTTGTTTTTTTTATGTTTTTTTTGT
TTTTATGCAGGCCGTGTCCAAGAACATCCGGGACGCGCTGCAGAGGCGGG
CGGGGGACTTCGGCATCGTGATGGAGGACACGGCCATTACCCACCTCAGC
TTCAGCAGAGAGTACACGGCTGCCGTCGAGGCCAAGCAG GTGACAGCGAT
CGACTGACAAACGCAAGCGATGTAGATTGGAGGTTCTTTGTCGAACAGGC
GGAAGAAAGCTGTCGTTTTTTGTGTTGAGAAGCAGAAGAATTCAAAGCCT
CGTTGAGGCGAAAGAGGTGCGATTGACTGAAAATGGCGATACAGTACTTG
CTTTTTCGGGCCCTATGCCAGCCTCGATTCCGGAAAGTCTCCGAGCGGTT
GGCGTTTTCATTTACGACGGTAGGGTCATTTTGGAGAATGGTCACGGGAC
AAAGCCGACTCAACACTTGGTTCTCTTCACCTGCTGCGCGTGTTTCATGT
TCTTGGCCACCCCTGCTGTACCTTCACCGCTCGATGATCCTTAATTTTTC
CGAGGCAAAGCACATATTTCCCCGGCTCAGGGTGATTACCACAATTCTTT
TCTGTTCTTGGCCTCCCCTATTCCTTAACCACTCGATTGAGCTTTGATTT
TTCTCGAGGCAAGAAACGATAACCCCGCGCACGTCGTCGTCTGATTGCCC
CCGCCAGGTTGCCCAACAAGACTCGGAGCGTGCCAAGTACGTCGTCGAGA
AGGCTCGCCAGGAGAAG GTGAAAAAAAGGGGGGGCACAGTGGAACCATTT
TTTTTGGGGGGGGGAGGGGGCAGAGGAACGAGAACCGGGGACCGAAAGCA
ACTGGAGTTTGTGGGCGTGTTTTTGCGGTGTGTGTTCACCTCACGCCGGC
GACCGGCTGGTCCCGAGGGTGGTTCGTTGTTCATCGCCGTGTGTGATCTG
TGCTACTGATGATGTTGACGATGGTGGTGGTTGGGGCAGGACTTCCGACG
CATCGCCGTGTGTGATCGGTGCTACTGATGATGTTGACGATGGTGGTGGT
TGGGGCAGGACTTCCGACGCAAAGAAATTACGCGTTTATCGACGAATTAG
AGAGTCAGAGGTGACGTGGACCCTATCCCCCAACCGCGACCCCCGAAATT
CCTCCGATTTCGTACTTTATCCCAGATGTTTGCTTAATGAAAACCTGCCT
AGGCTACTCGGGGCATGTGTCTCGCAGTTGACGGTCGATCTTGCGGCGAG
GAAGCAGCAGTCGTAGATGACTGAACAGCCCCTGGTTCCCTGGTTGGGTC
ACAGAACTTGTATAAGAAAGTATTAGCCCGATCCACCGTGCCAACTCCAC
GTCACGTTTTTGCCACTGCCGCTGGTTTGCGGGATTGGCGATATTCTCAC
CTGATCGAACACCGAGAAACAGTCGTGTATATGTATCACCCCGAAGTGTT
CTCAAACGTGGAACGTACGTTGCTCTCTGCACCCTCCTCTATATCTGCCG
TTCTTCCCCCCCTGATAAAAAGATGAGCATCGTGATCAAGGCACAGGGAG
AGGCGCAATCGGCCAAGCTGGTCGGAGAGGCCATCAAGGACAACCCGGGG
TTCATCCAGCTCCGACGCATTGACGCGGCGAGGGACATCGCGTCCACCGT
AGCAAG GTACGAACGTGGTATGTACATGGTTTTTCTATTGTGGTGATTCA
TTTTTTTTGTTTTTTTGTCTCCGACCATGTGCGTAGAAGTATATATTTTC
AAGTAATCCCCCCGGAGTGGGCCCATGAGAGAACAGTAGTGCCACACTAG
GGGTGATGCACGTTGAAAATGAAGGCAAGGTACGAGCACGTTAAGACTGA
CTGTATATTGCACAGATTTGTATTTTGGTCGGTTGAGGTTCGCTGGGCTG
TTCGAGCACAAAAACGTCAGTATTTTGTGAACTGTGAACTGGGGAGACGT
TCCACGACAGGTGTCAGCCAGCTGTGTGTTGTTTCTGCTGACTGCTGTTG
TTTTAATCTTGCGTCACTCCTTGATGACACTGCTGTGCTCTCATGAGTCC
GCCCACTCCGGAGGGATCACTTGTAAACATTGTTTTCTTGGAGAAAATCT
TGAGCTGTTTTTTGCTCTCGCGAGCACGGAAGTACTTCGTAAGTGCAACC
GCTGATGGAATGCGTGTGTTAATATGTAGTACCAACTTGAAGCGACGAGA
ACCGTTGCTTCGATTTAGAACCCCCCCATAGGCTTGGTAGAGCCTGGTCC
GGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAA
TGGTCGAACGACTACGGCATGCACGACTATGAGTACCCCCCCCCGCCCCA
AAAGCTTGGTGCGTTTTTCGCTGTTTGATAGACTTTCGCCGTGACAATTC
TGCCCTTCCCCCCTCCTCTCCGGTATTTTCGTGAGTTTTGGATAGGCCTT
GGTGGGTGCCGAGTCTTGCGTGTTGCCAGGCCAACGTGGGCGCGAAGACA
TTCACCTCTATCGTCAGTTTCGCCGCATTAGCCTCTCTAGTCGGGCACTG
CCACCACCTCCCCTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCATCTTG
TGTTTGTCGCATTAGGTCGAACAACAAGCTCTTCCTCAACACGGACAGTC
TTTTGCTTGACCTTGTGGGGCAGGGGGACGCCGGCATCAAGTCGACCATG
GGGGGCACCAAGAAGTCCTCTTGGCGTTAG AGGCTGTAGAAAATTTTCCG
GTTCTCATGTTCGTTTCTAAGGCGCTCCCCGAGGTTTTCTCTTTTTCCTG
GAGTTGGATGGGTTGTTTGGGCAGCGGGGTTTAAACCGATTTGCCCGAAA
CGTCAAACGACATCGAGTCTCTCTTGCGTTTCCGGTAGGCAGCGCTTGCT
GCACAGGAGGCCGCACGGCAGCAACTCCCGTCGTTTCTCTCTTGGTGTGC
CACCGAATCCGTTCGTTTTGCTTCTTGGTTGCGCTTCTCTTGGCGGCGAT
TGGGTTAACAAGAGGGGGCTCCGCAGACAGCACACAATAGATACCTATAT
GTCAGACCGGCTTGGCATGTAGGGTAAGGAAGAGATCATCCACCCTTTGC
GATGATCCGCGCGCATTTATGCGCCTCGGCGCGGGGGACGAGGACTCGAG
TTTTTTTGTTCTGTTTGTTTGTCCGAAGAAATATTTATTTTGGATGACAG
GTCGACTTGACCTCCTCCTGCAAAGGAGGGGGCTTGAAAGTTAAAAGCAT
GGGTCGTAGACCAATGCTCGCCCGGCGCAAGTAAACTGCGGTTTTTAGTC
GCCTTCTTGGAGTAGCTATTCGAGTCGCCGGACAAGTTTCGACAATGACG
TTGGTCTTTGGCCGAAAGAAGAACGAAGAGCCTCTGTGGTTAAGTATTGT
GATTGGTCACTGCAACCTGCACACAGTACGAGCAGAATTTGACCCCATGG
CTAGAGCTCTCGATGGTTTCCGTAGAGTCCGATGACAAACACCACCAGCC
CCATGCTTCGTGGTTTTCCACCTACTCCAGGACAAGGATCGGACCCGTCA
ACAGACGGTGTTGGGACCAAAAGAGGAGATGCTCAGCTTATTGGGAGCAC
TGAAGGCCGACAAACCACCAGAAGGCTTGGATGTGTCCACCTTGTTCCTT
CTTTCCGCACGGCTCGGTCTCTCGGTAGAATGCTGTTAAGACTCTGTGCT
TGAGAACACAAGATTCGGGGACAGATTTTGTTAAGATCAACTTGTTCTCG
TTCGTGCTGCAGATGTTTTCCTGCATCAACGAGCGCTCGGGCCGAGTGGG
ACACTACAACGAATTTTGTAGCCGTCAGTTCGAAGCCATAGGGAACGCCT
GCCAGGCCCACTTCGCATACGGAGTACATGACACACGAGAGGTCGCACAG
GCTCTTCGCGCCGAGGGAGTACGTCAAGCTCACCCCTCCGGGCAAATACG
AGAACCATGAAAACAATCTACGGAGATTCGGGACGCGGG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:556604..565242-
>mRNA_E-siliculosus-1a_M_contig98.17727.1 ID=mRNA_E-siliculosus-1a_M_contig98.17727.1|Name=mRNA_E-siliculosus-1a_M_contig98.17727.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1812bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:556604..565242- (Ectocarpus siliculosus Ec864m_EcPH12_78m male) back to top