mRNA_E-siliculosus-1a_M_contig98.17717.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: D7G0X4_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X4_ECTSI) HSP 1 Score: 288 bits (737), Expect = 9.550e-91 Identity = 140/144 (97.22%), Postives = 144/144 (100.00%), Query Frame = 3 Query: 447 SKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLRFVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEEAL 878
++GELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKET+EELGLSCDESSLRFVCTVATTAKG+TDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEEAL
Sbjct: 32 TQGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETDEELGLSCDESSLRFVCTVATTAKGSTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEEAL 175
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: A0A7S0NEA1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NEA1_9CRYP) HSP 1 Score: 213 bits (543), Expect = 5.700e-61 Identity = 100/206 (48.54%), Postives = 141/206 (68.45%), Query Frame = 3 Query: 285 GQDSGEMFDVFLPPEGGSLSVLSEPPRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLRFVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQALKEAYEAQ--------DPTYIPRPDYYVEPLFKALEEAL 878
GQD E+FDV+ PP S+S P AG K R LVH GDWHR++H+WL++ +G L++Q+RS KDTFPG WDVS+ GH ++G+ +ETA+KE EELGL +E L ++ T+AT+ +G++ + GDF+CNEYKDI+LL++DG ++DLKF+P EV+ V V + L+E E Q D YIPRP +Y++ LF AL E +
Sbjct: 52 GQDLAELFDVYKPP--ASISSFRGEPEKAGISKQRKLVHTQGDWHRAIHLWLYDLQGNLIIQQRSEGKDTFPGKWDVSIAGHVSSGDSVIETAMKEAKEELGLDVEEEQLEYLGTIATSMRGSSPITGDFLCNEYKDIFLLKYDGSLEDLKFAPEEVQAVSRVGWKTLQEQLEQQIGPEQQSVDGPYIPRPRHYLDLLFGALRERI 255
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: L1JKA1_GUITC (Nudix hydrolase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JKA1_GUITC) HSP 1 Score: 207 bits (526), Expect = 1.620e-58 Identity = 97/206 (47.09%), Postives = 140/206 (67.96%), Query Frame = 3 Query: 285 GQDSGEMFDVFLPPEGGSLSVLSEPPRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLRFVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQALKEAYEAQ--------DPTYIPRPDYYVEPLFKALEEAL 878
GQD E+FDV+ PP S+ P AG + R LVH GDWHR++HIWL++ +G L++Q+RS KDTFPG WDVS+ GH ++G+ +ETA+KE+ EELGL + L ++ T+AT+ G++ + GDF+CNEYKDI+LL+++G + DLKF+P EV+ V V ++L++ E Q D YIPRP +Y++ LF ALEE +
Sbjct: 51 GQDLSELFDVYKPP--SSIPGFRGEPERAGISRQRKLVHTQGDWHRAIHIWLYDGQGNLIIQQRSEGKDTFPGKWDVSIAGHVSSGDSVIETAMKESKEELGLDIKKEELEYLGTIATSMAGSSPITGDFLCNEYKDIFLLKYEGHLDDLKFAPEEVQAVSRVDWRSLRQQLEEQIGPDGQSIDGRYIPRPRHYMDLLFGALEERI 254
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: A0A7S0XXS4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XXS4_HEMAN) HSP 1 Score: 206 bits (524), Expect = 1.290e-57 Identity = 101/204 (49.51%), Postives = 135/204 (66.18%), Query Frame = 3 Query: 285 GQDSGEMFDVFLPPEGGSLSVLSEPPRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLRFVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQALKEAYEAQ--------DPTYIPRPDYYVEPLFKALEE 872
GQD GE+FD++ P+ + S PR G K RG VH DGDWHR+VH+WL+ +GE VLQ+RS KDTFPG WDVSVGGH T+G+ + T +KET EELG+ E+ L + TVAT+ KG + GDF CNE+KDI+LL++ G ++ L F+ +EV DVKLVP Q +++ AQ D Y+PRP Y++ LF A+ E
Sbjct: 93 GQDLGELFDLYHAPD--AEFAASGEPRKTGKNKERGKVHRDGDWHRAVHVWLYTPQGEFVLQQRSEKKDTFPGKWDVSVGGHVTSGDSVMHTVLKETQEELGVEVTEAELERLPTVATSLKGNSPKQGDFTCNEFKDIFLLKYSGTLEGLNFADNEVSDVKLVPWQEVEKDMLAQVSPDGEPTDGAYVPRPMSYIDILFDAMRE 294
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: A0A6T7KLM2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A6T7KLM2_9EUKA) HSP 1 Score: 198 bits (503), Expect = 1.790e-55 Identity = 105/211 (49.76%), Postives = 136/211 (64.45%), Query Frame = 3 Query: 252 LSSAVEDEVEVGQDSGEMFDVFLPPEGGSLSV-LSEPPRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLR--FVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGP---VQDLKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKAL 866
+S+A + GQD GE+F+++ PP SL+ LS PP G +K RG VHADGDWHRSVH+WL S G L+LQ+RS KDT PGMWDVS GH TAG++SL TA KE EELGL DE++LR VCT+ + A+G T HG F+CNE +D+YLL+ V L EVE +LV + A+E +PT++PR +YV L +AL
Sbjct: 25 ISAACTNVNAEGQDLGEIFELYSPP--SSLTAPLSMPPTELGVQKPRGQVHADGDWHRSVHVWLSTSDGRLLLQRRSQYKDTHPGMWDVSCAGHITAGDDSLTTARKELEEELGLVIDETTLRRALVCTLPSCARGATARHGPFLCNELQDVYLLQRPAEQLEVGSLSLEAGEVEATELVDAHEVLRAWEQAEPTFVPRQPHYVHALRQAL 233
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: A0A7S0IRD5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IRD5_9EUKA) HSP 1 Score: 192 bits (487), Expect = 4.770e-53 Identity = 100/213 (46.95%), Postives = 137/213 (64.32%), Query Frame = 3 Query: 255 SSAVEDEVEVGQDSGEMFDVFLPPEGGSLSVLSEPPRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLR--FVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGPVQD---LKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEEAL 878
++ +E GQD EMF+++ PP + LS+PP P G RK RG VHADGDWHRSVH+WL G L+LQ+RS KDT PGMWDVS GH +AG++SL TA KE EELG+S D S LR +CT+ + A+G T HG FVCNE +DIYL+++ + L EVE ++L+ + + +A+E + +++PRP +YV +AL E L
Sbjct: 35 AATLESANAFGQDLSEMFELYEPPH-CKIEPLSKPPVPLGVRKPRGEVHADGDWHRSVHVWLRTLDGRLLLQRRSQYKDTHPGMWDVSCAGHISAGDDSLGTARKELEEELGVSVDVSVLRGALLCTLPSCARGATTRHGPFVCNEIQDIYLVQYPAEQLEAGALSLESGEVEAIELLDARKVLQAWERAELSFVPRPPHYV----RALREGL 242
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: A0A7S0QHM2_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHM2_9CRYP) HSP 1 Score: 192 bits (489), Expect = 7.000e-53 Identity = 102/215 (47.44%), Postives = 132/215 (61.40%), Query Frame = 3 Query: 276 VEVGQDSGEMFDVFLPPE-------GGSLSVLSEPPRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLRFVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEV--------EDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEEA 875
V +GQ+ GE+FD +L P+ GG VLS G R VHA G WHR+VHIWL+NSKG+++LQKRS KDTFP WDVSVGGH +AG+ +E A++ET EELGL E L FV TVATT G++ G F CNEYKD++L R+DGP + L ++P EV ++V+ + + A E D I RP YY++ LF AL A
Sbjct: 66 VHLGQNLGELFDTYLEPDASFFTAKGGVNPVLS------GKSLPRKQVHATGTWHRAVHIWLYNSKGQILLQKRSDEKDTFPSKWDVSVGGHLSAGDTVVEAALRETEEELGLKIGEGDLAFVATVATTVAGSSAKQGAFTCNEYKDLFLARYDGPAEALVYAPDEVAGVAWRDADEVEAALRKQIGPAGEQLDGPLIARPAYYLDALFPALRRA 274
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: A0A7S4B8T2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B8T2_CHRCT) HSP 1 Score: 179 bits (455), Expect = 2.940e-47 Identity = 94/207 (45.41%), Postives = 124/207 (59.90%), Query Frame = 3 Query: 270 DEVEVGQDSGEMFDVFLPPEGGSLSVLSEPPRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLR--FVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGPVQD---LKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEEA 875
D +GQD GE F+++ P + ++LS PP P G RKARG VH DGDWHRSVH+WL + G L+LQ+RS KDT PG+WDVS GH +AG+ SL+TA KE EELG + + L FV T A+T +G T HG F CNEY+DIYL D L EV V+++ L A+E +D ++PR Y L A+++
Sbjct: 132 DANALGQDLGEQFELYAGPLNEAPTILSAPPTPLGVRKARGEVHRDGDWHRSVHVWLGDEMGRLLLQRRSEHKDTHPGLWDVSCAGHISAGDGSLDTAQKELEEELGFAVGLAELEACFVGTFASTMRGITAKHGAFECNEYQDIYLFITPSASLDADKLVLGAGEVAGVQMIDATELISAWEREDAQFVPRSALYAHTLRAAVDKT 338
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: A0A6V2PJN3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2PJN3_HETAK) HSP 1 Score: 176 bits (447), Expect = 1.350e-46 Identity = 91/214 (42.52%), Postives = 131/214 (61.21%), Query Frame = 3 Query: 249 LLSSAVEDEVEV---GQDSGEMFDVFL--PPEGGSLSVLSEPPRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLRFVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDG-PVQDLKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEE 872
L+ + + EV V GQD+ E+F ++ PPE S + P G KARG VH DGDWHRSVHIW+ + KG L+LQ+RS KDTFP WDVS GGH T + +ETA++E EE+GL E + VC V + KGTT HGDF NE++D+YL+ +G + D+ + EV ++K + ++ Y+A + Y+PRP Y + LF+ +++
Sbjct: 72 LIRTLMAKEVAVYAEGQDASELFALYNAPPPECDSNCCV---PIKTGILKARGEVHRDGDWHRSVHIWIGDDKGNLMLQRRSKFKDTFPNCWDVSAGGHITGYDSVMETAVREVEEEVGLELPEQAFMHVCCVPSRLKGTTKRHGDFYDNEFQDMYLVIIEGLQLDDMTIAEGEVAEIKFMHYTEARKEYDAGNQLYVPRPKLYFKSLFEKMDK 282
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Match: A0A7S4UN69_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UN69_9DINO) HSP 1 Score: 170 bits (431), Expect = 8.850e-45 Identity = 89/203 (43.84%), Postives = 122/203 (60.10%), Query Frame = 3 Query: 273 EVEVGQDSGEMFDVFLPPEGGSLSVLSEP---PRPAGFRKARGLVHADGDWHRSVHIWLHNSKGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETNEELGLSCDESSLRFVCTVATTAKGTTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSE--VEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKAL 866
E GQD E+FD+ PP G+ L P P G K R VH DGDWHRSVH+WL + +G+L+LQ+RS KDT PG WDVS GH AG+ LETA++E EELGL+ S+L+ + T+A +A G T+ HG F CNEY+++YLLR G +SP+E V +++ P+ + + Y+PR Y++ L AL
Sbjct: 51 EFPEGQDLDELFDLCEPPPEGAPGGLLAPGAGPALTGATKQRRWVHRDGDWHRSVHVWLLDEEGDLLLQRRSKHKDTHPGCWDVSCAGHIGAGDAGLETAVRELEEELGLAVPLSALKHLFTIAASASGATERHGPFRCNEYQEVYLLRVFGAHASRGYSPAEGEVAELRSEPIAETERSLRTGAADYVPRSREYIDALVGAL 253 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17717.1 >prot_E-siliculosus-1a_M_contig98.17717.1 ID=prot_E-siliculosus-1a_M_contig98.17717.1|Name=mRNA_E-siliculosus-1a_M_contig98.17717.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=271bp MRSRIVGACLSGCAYGVRTSSAFVFPRCGPIMRPAGAAANHQARAYRHAAback to top mRNA from alignment at E-siliculosus-1a_M_contig98:373418..378283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17717.1 ID=mRNA_E-siliculosus-1a_M_contig98.17717.1|Name=mRNA_E-siliculosus-1a_M_contig98.17717.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4866bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:373418..378283- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:373418..378283- >mRNA_E-siliculosus-1a_M_contig98.17717.1 ID=mRNA_E-siliculosus-1a_M_contig98.17717.1|Name=mRNA_E-siliculosus-1a_M_contig98.17717.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1626bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:373418..378283- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |