Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 306 |
| Model size | 308 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936556.8055098-CDS-E-siliculosus-1a_M_contig98:346888..347194 | 1622936556.8055098-CDS-E-siliculosus-1a_M_contig98:346888..347194 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig98 346889..347194 + |
| 1696251129.6084812-CDS-E-siliculosus-1a_M_contig98:346888..347194 | 1696251129.6084812-CDS-E-siliculosus-1a_M_contig98:346888..347194 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig98 346889..347194 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17715.1 >prot_E-siliculosus-1a_M_contig98.17715.1 ID=prot_E-siliculosus-1a_M_contig98.17715.1|Name=mRNA_E-siliculosus-1a_M_contig98.17715.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=102bp
WIQSTNNATTNSCPENECVHHQALVEIVSPLLMVARDGGMKHDQANGIRR
LAISSTEIPPSTPSDVLVFLSYQFLREGEPKKLIPPTTPTKPKTPKRMLS
KN back to topmRNA from alignment at E-siliculosus-1a_M_contig98:346889..347195+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig98.17715.1 ID=mRNA_E-siliculosus-1a_M_contig98.17715.1|Name=mRNA_E-siliculosus-1a_M_contig98.17715.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=307bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:346889..347195+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TGGATACAAAGTACAAACAACGCTACAACGAACTCTTGTCCCGAAAACGA
GTGTGTCCATCATCAAGCACTCGTTGAAATCGTTTCTCCTCTACTTATGG
TTGCACGCGACGGAGGCATGAAACACGACCAAGCCAACGGGATTCGGCGT
CTTGCGATTTCTTCCACCGAAATACCCCCTTCTACGCCATCTGACGTGCT
TGTTTTCTTGTCTTATCAGTTTTTGAGGGAGGGAGAACCAAAAAAATTAA
TCCCACCAACGACGCCTACTAAACCGAAAACGCCAAAGCGCATGCTCTCG
AAGAATC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:346889..347195+ >mRNA_E-siliculosus-1a_M_contig98.17715.1 ID=mRNA_E-siliculosus-1a_M_contig98.17715.1|Name=mRNA_E-siliculosus-1a_M_contig98.17715.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=612bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:346889..347195+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TGGATACAAAGTACAAACAACGCTACAACGAACTCTTGTCCCGAAAACGA
GTGTGTCCATCATCAAGCACTCGTTGAAATCGTTTCTCCTCTACTTATGG
TTGCACGCGACGGAGGCATGAAACACGACCAAGCCAACGGGATTCGGCGT
CTTGCGATTTCTTCCACCGAAATACCCCCTTCTACGCCATCTGACGTGCT
TGTTTTCTTGTCTTATCAGTTTTTGAGGGAGGGAGAACCAAAAAAATTAA
TCCCACCAACGACGCCTACTAAACCGAAAACGCCAAAGCGCATGCTCTCG
AAGAATTGGATACAAAGTACAAACAACGCTACAACGAACTCTTGTCCCGA
AAACGAGTGTGTCCATCATCAAGCACTCGTTGAAATCGTTTCTCCTCTAC
TTATGGTTGCACGCGACGGAGGCATGAAACACGACCAAGCCAACGGGATT
CGGCGTCTTGCGATTTCTTCCACCGAAATACCCCCTTCTACGCCATCTGA
CGTGCTTGTTTTCTTGTCTTATCAGTTTTTGAGGGAGGGAGAACCAAAAA
AATTAATCCCACCAACGACGCCTACTAAACCGAAAACGCCAAAGCGCATG
CTCTCGAAGAAT back to top
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