mRNA_E-siliculosus-1a_M_contig98.17696.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 1239 bits (3207), Expect = 0.000e+0 Identity = 854/881 (96.94%), Postives = 866/881 (98.30%), Query Frame = 3 Query: 36 MGILRGRNVKKKHMMSSKPQPEQQAPGDAAPPNSPVNNPGLVLDGGGAEEDFDDRTGGSKSRRQSSRERQRRPHRGLSRGVSAAMLKQGTDEPDPGMFDRGPQTPDFQQGFSQDQPQAAGEVAVPSGAPRMHEWHVERKEAVAEACESLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDVREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAGELEAAGKALETLERLSILTLEVGGKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVEGTGPVASPYDAALGRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALAIFRERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIREDLDPNHADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEKLAXXXXXXXXXXXXXXXXXHEEAGPTKEGXXXXXXXXXXXXXXXXXXXXXXXXXRKALKVYAPPPSLAERLTVPLLVAGGLLGATLLLMRSRRTGRS 2678 MGILRGR++K+KHMMSSKPQPE+QAPGD APPNSPVNNPGLVLDGGG EEDFDDRTGGSKSRRQSSRERQRRPHRGLSRGVSAAMLKQGTDEPDPGMFDRGPQTPDFQQGFSQD+ Q+AGEVAVPSGAPR+HEWHVERKEAVAEAC+SLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADD+REPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQ CEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSA ELEAAGKALETLERLSILTLEV GKYRVHEVHADFVRECEV N +EREMALARWRGYASDLRALSTYSS WLVKIWDVIAQ+EGTGPVASPYDAAL RVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRAL IFRERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIREDLDPNHADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEKLAXXXXXXXXXXXXXXXX HEEAGPTKEGXXXXXXXXXXXXXXXXXXXXXXX RKALK YAPPPSLAERLTVPLLVAGGLLGATLLL+RSRRTGRS Sbjct: 1 MGILRGRSIKQKHMMSSKPQPEKQAPGDVAPPNSPVNNPGLVLDGGGTEEDFDDRTGGSKSRRQSSRERQRRPHRGLSRGVSAAMLKQGTDEPDPGMFDRGPQTPDFQQGFSQDESQSAGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVASPYDAALDRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTIFRERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIREDLDPNHADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEKLAXXXXXXXXXXXXXXXXVHEEAGPTKEGXXXXXXXXXXXXXXXXXXXXXXXKTRKALKAYAPPPSLAERLTVPLLVAGGLLGATLLLLRSRRTGRS 881
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 473 bits (1217), Expect = 1.240e-148 Identity = 264/499 (52.91%), Postives = 337/499 (67.54%), Query Frame = 3 Query: 393 GEVAVPSGAPRMHEWHVERKEAVAEACESLGIGS--GKSEF-FEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDVREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNG-RLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAGELEAAGKALETLERLSILTLEVG-GKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVEGTGPVASPYDAALGRV-DPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALA 1871 G V +PSGAP + +W+VER + C LGIG+ G F E PR+VG++GPGG+GKST+ASMV+ + DV+ +F VLWL VG+GAK LP LM LA V ETVL+K R PR A VG++ EDGA YI E + + RFLVVADDV + EVL EL+ AG WV+YT+R+ +L G P +RL+ V +EE M+LRRAA LG+ A LPPAA+ELM+ C++ + LA GRWG +R +S E AWRAAL I E Q+ GG+G +LL WR A+LR G L +D+ T ELY +LA+LP GLAF +VA +LLYGD+ S L+AA L TLERLSILTLE G Y VHE H DFV + + R+ AL RWR Y S +RAL+TYSS WL K+W+ +++VEG G V SPY+AAL + D S +L +AL+RAA FH+ RED EA+ K L LI+E A GP VAK LH LGMC + GR++E E +RALA Sbjct: 5 GRVNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFPGTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKEQTA-GPHHPDVAKILHNLGMCACEVGREKETEGYLRRALA 502
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 474 bits (1219), Expect = 1.200e-146 Identity = 264/499 (52.91%), Postives = 339/499 (67.94%), Query Frame = 3 Query: 393 GEVAVPSGAPRMHEWHVERKEAVAEACESLGIGS--GKSEF-FEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDVREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNG-RLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAGELEAAGKALETLERLSILTLEVG-GKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVEGTGPVASPYDAALGRV-DPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALA 1871 G V +PSGAP + +W+VER + A+ C LGIG+ G F E PR+VG++GPGG+GKST+ASMV+ + DV+ +F VLWL VG+GAK LP LM LA+ V ETVL+K R PR A VG++ EDGA YI E + + RFLVVADDV + EVL EL+ AG WV+YT+R+ +L P +RL+ V +EE M+LRRAA LG+ LPPAA+ELM+ C++ + LA GRWG +RG+S E AWRAAL I E Q+ GG+G +LL WR A+LR G L +D+ T ELY +LA+LP GLAF +VA +LLYGD+ S L+AA L TLERLSILTLE G Y VHE H DFV + + R+ AL RWR Y S +RAL+TYSS WL K+W+ +A+VEG G V SPY+AAL + D S +L +AL+RAA FH+ R D EA+ K +L LI+E A GP VAK LH LGMC + GR++E E +RALA Sbjct: 171 GRVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKEQTA-GPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 668
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 411 bits (1057), Expect = 1.230e-121 Identity = 247/501 (49.30%), Postives = 315/501 (62.87%), Query Frame = 3 Query: 390 AGEVAVPSGAPRMHEWHVERKEAVAEACESLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGA-KHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDVREPEVLEELKWAGVW-VLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRL-LAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAGELEAAGKA---LETLERLSILTLEVGGKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVEGTGPVASPYDAALGRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALAI 1874 A V +P+ APR+ + VER E +++ C LGI + + +VVG++G GGSGKST+ASMVI R+DVR +F GVLWL VG+ A + L EL+ LA MVYETV +K CRP R +G D ED A YI + E RFLVVADDV + EVL+EL+ A VW VLYTSR DLL AP++ LD + +EE MVLR AA L DA LP AA++LM+ CEY A+ L F GRW R ++ E AWR AL I +AQ RG GRL L+WR A+L G +EL ++ +ELYL+LA++P+G F VAAVLLYGD S E E +A ETLER SI+T GG YRVH+ H DF+R N+ R L RWR Y S + AL T S WL + W+V+A+ +G + PY ALG + PSS AL+ AA F+ RE + A QL +I+E A G S+ VA+TLH LG+CVY +GR EEAE +RAL I Sbjct: 21 ASTVRIPTTAPRIRDRFVERGEVISQVCSLLGIEDHTTAYPAEMKVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQKRCRPLRKGVIGTDDEDPAAYIQCLQVERPRRFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPRAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCIVDAQTRG-EGRLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGRSGEEKEDREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSALVTLSEDWLSEGWNVLAEAQGEPVPSQPYLEALGGLAPSSADRPMALRTAASFYRDREQWMPASDYFSQLLIIQEHTA-GVDSVVVARTLHELGLCVYMSGRAEEAELRLKRALRI 519
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 317 bits (812), Expect = 5.810e-86 Identity = 209/513 (40.74%), Postives = 291/513 (56.73%), Query Frame = 3 Query: 408 PSGAPRMHEWHVERKEAVAEACESLGIGS-GKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYF-YKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKAC------RPPRLAGVGVDPEDGAGYIHEVV-----NESNHRF---LVVADDVREPEVLEELKWAGVWVLYTSR-RDDLLT---GAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAGELEAAGKALETLERLSILTLEVGGKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVE---GTGPVASPYDAALGRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLI-EETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALAI 1874 P+ AP + +W ++R+ VA C+ LG+ G+S P VVG++GP G+GKST+ASM++AR DVR +F KGV+WL VG+GA+ L ++M LA MV+E + RPPR +GV+PEDGA Y+ E++ S+ F LVVADDV E EVL EL+ G +LYT+R +DLL G+ +LR+D VT+ E +LRRAA L D + LP AAH++++ AM +A+ GRW +VRGK+D+ AW A L H+ +AQ LL WR A+LR+G L TKELYLSL +LP+ L+F V V + SA EL+AA A+ TLE+ S+L GG+YRVH HAD + + ALARWR S A+ T+ + LV IW+ I +E G + PY + +D S + L+R A F W + A +L E++AA P V T++ LG +GR EAE ++R LAI Sbjct: 261 PAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASGEPPVVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHELADSSSSPDDGPFRPPRTPDIGVEPEDGAAYVREILAADEGERSSGGFGELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQNFMKGAALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSF--SVDDVTALVSDGSAEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEIGEGAEDIGQPYAETVDAMDLSDAGAFQLLRRIAFFQWLTNEPDAACMSWSKLLASGEDSAANHPD---VHVTMYTLGAHALISGRTPEAEGWFRRTLAI 768
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 312 bits (799), Expect = 3.930e-84 Identity = 201/514 (39.11%), Postives = 284/514 (55.25%), Query Frame = 3 Query: 408 PSGAPRMHEWHVERKEAVAEACESLGIGS-GKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFY-KGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKAC-------RPPRLAGVGVDPEDGAGYIHEVVNESNHR--------FLVVADDVREPEVLEELKWAGVWVLYTSR-RDDLLT---GAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAGELEAAGKALETLERLSILTLEVGGKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVE---GTGPVASPYDAALGRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLI-EETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALAI 1874 P+ AP + +W ++R+ VA C+ LG+ G S P VVG++GP G+GKST+ASM+IAR DVR +F K ++WLPVG+GA+ L ++M LA MV+E V+ + RPP+ +GV+PEDGA Y+ E++ LVVADD+ E EVL EL+ G +LYT+R +DLL G+ +LR+D VT+ E +LRRAA L D LP AAH++++ AM +A+ GRW +VRG +D+ AW L H+ +AQ LL WR A+LR+G L TKELYLSL +LP+ L+F V V + SA EL+AA A+ TLE+ S+L GG+YRVH HAD + + ALARWR S A+ + + LV IW I +E G + PY + ++ S + L+R A F W + A +L E++AA P A+ ++ LG +GR EAE ++R LAI Sbjct: 305 PAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSRASGEPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVGQGARDRLLDVMYRLAVMVHELVVNSSSFPDDGPFRPPQPPDIGVEPEDGAAYVREILTADEGERSSGGFGELLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAASGGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQNFMKGAALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSF--SVGDVTALVSDGSAEELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDAMNLSDAGAFQLLRRIAFFQWMTNEPDAACMSWSKLLASGEDSAANDPDVHAI---MYTLGAHALVSGRTHEAEGWFRRTLAI 813
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 311 bits (796), Expect = 3.640e-83 Identity = 228/573 (39.79%), Postives = 300/573 (52.36%), Query Frame = 3 Query: 390 AGEVAVPSGAPRMHEWHVERKEAVAEACESLGIGSGKSEF----FEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPV-GEGAKHCLPELMLHLARMVYETVLR--------KACRPPRL-AGVGVDPEDGAGYIHEVVNES------------NH-------RFLVVADDVREPEVLEELKWAGVWVLYTSRRD---------------DLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHI-AEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGD----------ECSAGELEAAGKALETLERLSILTLEVGGKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKI-WDVIAQVEGTGPVASPYDAALGRVDPSSPKLAKA-LKRAARFHWRREDRLEAYTKQYQL------RLIEETAAEGPS------SLAVAKTLHILGMCVYKAGRKEEAEDNYQRALAIFRERL 1889 A +V VPS APR+ W++ R E V + C LG+ SG + E PR+VG++GP G GKST+ S+V+AR+DVR YF G++WLPV G+GA+H LP+LML LA MVYET+L+ K RPPR GV D E+GA YI + + +H R+L+VADDV EPEVLEEL+ G WVLYT+ R D A +LRLD ++ EG VLRRA+GL +A LP A +L++ M LA+ GRWGVVRG +D +AW AAL + E G W A+L G +L + K+LYLSLA+LPKGL+F AA LL+G + + +L A + L LER S+L LE GG+Y +H HADFVRE R+ AL RWR + S AL + V+I W +++ + PYDA L +D S A L+R A+ + A+ K +L RL E A G S L +A LH LGM G EEA + RA +I ERL Sbjct: 236 ASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVFLEGGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVGVTESRLEREAAGGGDSIRQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIREERL 808
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: D7G2X0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI) HSP 1 Score: 274 bits (701), Expect = 2.350e-72 Identity = 206/522 (39.46%), Postives = 270/522 (51.72%), Query Frame = 3 Query: 525 VVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPV-GEGAKHCLPELMLHLARMVYETVLR--------KACRPPRL-AGVGVDPEDGAGYIHEVVN-------------ESNH------RFLVVADDVREPEVLEELKWAGVWVLYTSRRDDLLTG-------------------APLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHI-AEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAG-----ELEAAGKALETLERLSILTLEVGGKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVEGTGPVASPYDAALGRVDPSSPKLAKA-LKRAARFHWRREDRLEAYTKQYQL------RLIEETAAEGPS------SLAVAKTLHILGMCVYKAGRKEEAEDNYQRALAIFRERL 1889 +VG++GP G GKST+ S+V+AR+DVR +F G++WLPV G+GA+H LP+LML LA MVYETVL+ K RPPR GV D E+GA YI + ES+ R+L+VADDV EPEVLEEL+ G WVLYT+ R A +LRLD ++ EG VLRRA+GL +A LP A +L + M LA+ GRWGVV G +D +AW AL + E + G W A+L G +L + K+LYLSLA+LPKGL+F AA LL+G + A +L A + L LE+ S+L LE GG+Y +H HADFVRE R+ AL RWR +AS AL + V+I ++ ++ PYDA L +D S A L+R A+ + A+ K +L RL E A G S L +A LH LGM G EEA + RA +I ERL Sbjct: 1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITRPGGEEGDGGGESHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDXXXXXXXGDHADVLRLDNISDAEGETVLRRASGLDPEAELPQPALDLFKSYGSVVMDLAYIGRWGVVHGTTDVKAWEVALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPADAAALLFGGDTKAAKAATPDLGAVMEVLGVLEQCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHASTPAALFAWPVEDSVRIQWALSSLDDAVEPPPPYDAMLDGMDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVVVTESRLEREAAGGGDSISQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIREERL 522
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI) HSP 1 Score: 252 bits (643), Expect = 7.790e-69 Identity = 163/369 (44.17%), Postives = 205/369 (55.56%), Query Frame = 3 Query: 786 VVNESNHRFLVVADDVREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAGELE---AAGKALETLERLSILTLEVGGKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVEGTGPVASPYDAALGRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALAIFRE 1883 V +E R LVVADDVRE EVL+ELK G MVLRRAA L + A LP A +ELM+ CE+ + +AF GRWGVVRG+ E+AW+ AL I EAQ G L+WR ++LR G +EL D+ KELYL+LA+LP GL F S+VAA LLY D S +LE A + TLER SIL GG YRVH+ H+DF+R C TNKD ++ L RWR Y S +RAL LVKIWD +A + PYD AL +D S +L +AL A F+ RED A + +L ++ET L V +TL L + Y +GR EEAE +RA AI +E Sbjct: 2 VEDEGRERVLVVADDVREAEVLQELKTEGA----------------------------DMVLRRAADLDESAVLPDAGYELMRRCEFVVLDIAFVGRWGVVRGRRKEKAWQMALDRILEAQAGGEGVGPLSWRASVLRAGLEELAVDNPLNKELYLALAVLPMGLTFPSEVAAALLYDDALSGEDLEDLEVAEEVAATLERWSILIRMGGGNYRVHDEHSDFIRGCLSTNKDTQDRVLRRWRRYISSVRALLACEPEDLVKIWDSLASDQDDVIDPRPYDRALEAMDMPSAELPRALHLAGFFYMVREDGEGACSTFSKLLKLQETTVTS-DGLIVWETLRSLHLSAYMSGRWEEAEVTQRRADAILKE 341
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 245 bits (626), Expect = 3.600e-63 Identity = 186/503 (36.98%), Postives = 264/503 (52.49%), Query Frame = 3 Query: 405 VPSGAPRMHEWHVERKEAVAEACESLGIGSGKSEFFEMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNH----RFLVVADDVREPEVLEELKWAGVWVLYTSRRDDLLTGAP--LLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQHCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHI-AEAQKRGG---NGRLLAWRDA----MLRIGPDELEA--DSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSAGELEAAGKALETLERLSILT--------LEVGGKYRVHEVHADFVRECEVTNKDEREMALARWRGYASDLRALSTYSSVWLVKIWDVIAQVEGTGPVAS-PYDAALGRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKE 1838 +P P WHVER + E+L G P +VG+ G GSGK+T AS ++ +VR+ F GV+WL V GAK LP LML LA M+ E V R P + +DGA YI E + + + LVVAD+V E EV+ +L G+WVL ++R ++L+ G+ ++ +D +++ E VLR+A+ L + LP A +L++ C AM LAF GRW VRG+SD AW A G + AE K G +G ++ RDA +L+ G ++L + D + LYLSLA+LP G F K AAVLLY + SA + +A +E LER S+L GG Y +H+ H+DF RE + D R AL RW S L L + + +W + QV G G ++ PY+AAL ++ S P L ++ A+F ED EA +L + T GP SL+V ++LH LG+ AGR E Sbjct: 203 IPKATPIRKSWHVERLYVMERVFEALTAVGG-------PHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEV---GGRRPATS------DDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKV-GPYSLSVIRSLHELGLGYKHAGRLE 688 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 18 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17696.1 >prot_E-siliculosus-1a_M_contig98.17696.1 ID=prot_E-siliculosus-1a_M_contig98.17696.1|Name=mRNA_E-siliculosus-1a_M_contig98.17696.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=882bp MGILRGRNVKKKHMMSSKPQPEQQAPGDAAPPNSPVNNPGLVLDGGGAEEback to top mRNA from alignment at E-siliculosus-1a_M_contig98:128298..136074- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17696.1 ID=mRNA_E-siliculosus-1a_M_contig98.17696.1|Name=mRNA_E-siliculosus-1a_M_contig98.17696.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7777bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:128298..136074- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:128298..136074- >mRNA_E-siliculosus-1a_M_contig98.17696.1 ID=mRNA_E-siliculosus-1a_M_contig98.17696.1|Name=mRNA_E-siliculosus-1a_M_contig98.17696.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5292bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:128298..136074- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |