mRNA_E-siliculosus-1a_M_contig98.17695.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 1239 bits (3206), Expect = 0.000e+0 Identity = 629/661 (95.16%), Postives = 639/661 (96.67%), Query Frame = 1 Query: 67 GVSVLTYIREFTAGAATLLQEIPAVGIACKTYLTFEVLVQTATSNKHELSVLGELIDLVLQRYVKRCAEKEQGVRQELLSLENHIKSAQDVAGLCNGKGLKRLKQLALCRRICNDIESVRKNVLHFCNVNNLVLTSELSFKLDDVARLLEAQDQTLKEVMEKPGRVNIPSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGGRVLWLSVGKGAKDRLPTLMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKTELFPETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 2049 GV VLTYIREFTAGAATLLQE PAVGIACK YL FE LVQTATSNK ELSVLGELIDLVLQRYVKRCAE+EQGVRQELLSLENHIKSA+ VAGLCNGKGLKRLKQL LCRRICN+IESVRKNVLHFC +NNLVLTSELSFKLDDVARLLEAQDQTLK VMEKPGRVNIPSGAPSIRDWYVERV V QICHHLGIGTSNGIPSFP EQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFF GRVLWLSVGKGAKDRLPTLMFELA VRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRK ELFPETPAIRLEEVLEEEAEMMLRRAADLGE+ RLPPAAYELM+RCDF+VLDLALVGRWG IR RSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWR+YISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDS+GELLEALRRAAEFHFCR DWSEAFDKYS+LLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA Sbjct: 8 GVRVLTYIREFTAGAATLLQETPAVGIACKAYLAFEDLVQTATSNKLELSVLGELIDLVLQRYVKRCAEREQGVRQELLSLENHIKSAESVAGLCNGKGLKRLKQLTLCRRICNEIESVRKNVLHFCTINNLVLTSELSFKLDDVARLLEAQDQTLKAVMEKPGRVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPTLMFELAKTVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAELFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 668
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 976 bits (2522), Expect = 0.000e+0 Identity = 490/502 (97.61%), Postives = 495/502 (98.61%), Query Frame = 1 Query: 544 MEKPGRVNIPSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGGRVLWLSVGKGAKDRLPTLMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKTELFPETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 2049 ME+PGRVNIPSGAPSIRDWYVERVGVA QICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFF GRVLWLSVGKGAKDRLP LMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVL ELRRAGAWVIYTTRKTELFP TPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCE AWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKL+KVEGEGFVRSPYNAAL+AIMDDS+GELLEALRRAAEFHFCREDWSEAFDKYS+LLLIKEQTAGP HPDVAKILHNLGMCACEVGREKETEGYLRRALA Sbjct: 1 MERPGRVNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELFPGTPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKEQTAGPHHPDVAKILHNLGMCACEVGREKETEGYLRRALA 502
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: D7FQM2_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM2_ECTSI) HSP 1 Score: 528 bits (1359), Expect = 2.360e-171 Identity = 310/501 (61.88%), Postives = 325/501 (64.87%), Query Frame = 1 Query: 544 MEKPGRVNIPSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGGRVLWLSVGKGAKDRLPTLMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKTELFPETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRAL 2046 ME+PGRVNIPSGAPSIRDWYVE VGVA QICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFF GRVLWLSVGKGAKDRLP LMFELANRVRETVLQKMARRPREATVGI G + R G G R + RR G R A +++R + D + G G+ +A G+ VALILLYGDDFSESALKAAEAVLGTLERLSI HVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKL+KVEGEGFVRSPYNAAL+AIMDDS+GELLEALRRAAEFHFCREDWSEAFDKYS+LLLIKEQTAGP HPDVAKILHNLGMCACEVGREKETEGYLRRAL Sbjct: 1 MERPGRVNIPSGAPSIRDWYVEWVGVATQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVGKGAKDRLPALMFELANRVRETVLQKMARRPREATVGIIRGRGGLHPR---GGGQGRHALPG---------GSRRRLG---------------------------------RGGAGGAQESRGVGHLHHPQ--------DRTVPGNPGD----------KAGXXXXXXXX-------------------------XXXXXXXXXXXXXXXXXXGVRADEAVALILLYGDDFSESALKAAEAVLGTLERLSI---------------HVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFVRSPYNAALNAIMDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKEQTAGPHHPDVAKILHNLGMCACEVGREKETEGYLRRAL 398
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 475 bits (1222), Expect = 4.350e-147 Identity = 266/501 (53.09%), Postives = 341/501 (68.06%), Query Frame = 1 Query: 547 EKPGRVNIPSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGGRVLWLSVGKGAKDRLPTLMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKTELFPETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTA-GPDHPDVAKILHNLGMCACEVGREKETEGYLRRAL 2046 + G V +PSGAP I +W+VER + C LGIG+ G F E PR+VG++GPGG+GKST+ASMV+ + DV+ +F VLWL VG+GAK LP LM LA V ETVL+K R PR A VG++ EDGA YI E + + RFLVVADD+ + EVL EL+ AG WV+YT+R+ +L P +RL+ V +EE M+LRRAA LG+ A LPPAA+ELM+RC++ + LA GRWG +R +S E AWRAAL I E Q+ GG+G +LL WR A+LR G L +D+ T ELY +LA+LP GLAF +VA +LLYGD+ S L+AA L TLERLSILTLE SG Y VHE H DFV + +A + R+ AL RWR Y S +RAL+TYSSAWL K+W+ +A++EG G V SPY+AAL + D S +L +AL+RAA FH+ RED EA+ K L LI+E A GP VAK LH LGMC + GR++E E +RAL Sbjct: 117 QSAGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGS--GKSEFF-EMPRVVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVGEGAKHCLPELMLHLARMVYETVLRKACRPPRLAGVGVDPEDGAGYIHEVVNESNHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLTGAPLLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHIAEAQKRGGNG-RLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDECSADELEAAGKALETLERLSILTLEV-SGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVASPYDAALDRV-DPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAEGPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRAL 611
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 428 bits (1100), Expect = 3.390e-128 Identity = 252/512 (49.22%), Postives = 320/512 (62.50%), Query Frame = 1 Query: 526 QTLKEVMEKPGRVNIPSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGGRVLWLSVGKGA-KDRLPTLMFELANRVRETVLQKMARRPREATVGINSEDGAAYIREEAGKGDTRFLVVADDVWDAEVLAELRRAGAW-VIYTTRKTELFPETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFS---ESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRAL 2046 Q + V + V IP+ AP IRD +VER V Q+C LGI + ++P E ++VGLAG GG+GKSTVASMV+ + DV+AFF G VLWLSVG+ A +DRL L+ LA V ETV QK R R+ +G + ED AAYI+ + RFLVVADDVW EVL ELRRA W V+YT+R T+L P P + L+++ EEAEM+LR AA+L + A LP AAY+LM+RC++A LDL VGRW RRR+ E AWR ALD I++ Q G +G L WRAAVL GL LA +N ELY ALA++P G FPP+VA +LLYGD S + + A+ + TLER SI+T GWY VH+ H DF+ A + R+T L RWRRY+SSV AL T S WL + W LA+ +GE PY AL + S + ALR AA F+ RE W A D +S LL+I+E TAG D VA+ LH LG+C GR +E E L+RAL Sbjct: 12 QEQRRVADLASTVRIPTTAPRIRDRFVERGEVISQVCSLLGI--EDHTTAYPAEM-KVVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQKRCRPLRKGVIGTDDEDPAAYIQCLQVERPRRFLVVADDVWQTEVLDELRRASVWGVLYTSRNTDLLPRAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCIVDAQTRG-EGRLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGRSGEEKEDREEAKNIFETLERWSIIT-RVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSALVTLSEDWLSEGWNVLAEAQGEPVPSQPYLEALGGLAPSSADRPM-ALRTAASFYRDREQWMPASDYFSQLLIIQEHTAGVDSVVVARTLHELGLCVYMSGRAEEAELRLKRAL 517
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 302 bits (774), Expect = 2.820e-81 Identity = 204/515 (39.61%), Postives = 284/515 (55.15%), Query Frame = 1 Query: 571 PSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGGR-VLWLSVGKGAKDRLPTLMFELANRVRETVLQKMA------RRPREATVGINSEDGAAYIRE--------EAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKTE----LFPETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVE-GEGF--VRSPYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 2049 P+ AP ++DW+++R V IC LG+ G GE P +VG+AGP GAGKST+ASM+V + DV+ F + V+WLSVG+GA+DRL +M+ LA V E + R PR +G+ EDGAAY+RE + G LVVADDVW+AEVLAELR GA ++YTTR E + +R++EV E EAE +LRRAA L + ++LP AA+++++R +D+A VGRW +R ++ + AW A L +I+ Q G LLPWR+AVLR G+ L + T ELY +L +LP L+F + L+ D S L+AA + TLE+ S+L E G Y VH +H D AL RWR +S+ A+ T+ + L +WE + +E GEG + PY + A MD SD + LRR A F + + A +S LL E +A +HPDV ++ LG A GR E EG+ RR LA Sbjct: 261 PAEAPLLQDWFIQREPVVAAICDRLGV-NDRGRSRASGEPP-VVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVGQGARDRLLDVMYRLAVMVHELADSSSSPDDGPFRPPRTPDIGVEPEDGAAYVREILAADEGERSSGGFGELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAASGGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHVIDAQNFM-KGAALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALV--SDGSAEELQAATLAMATLEQWSVLVRTEG-GRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEIGEGAEDIGQPYAETVDA-MDLSDAGAFQLLRRIAFFQWLTNEPDAACMSWSKLLASGEDSAA-NHPDVHVTMYTLGAHALISGRTPEAEGWFRRTLA 767
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 301 bits (772), Expect = 6.810e-81 Identity = 200/516 (38.76%), Postives = 284/516 (55.04%), Query Frame = 1 Query: 571 PSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGG-RVLWLSVGKGAKDRLPTLMFELANRVRETVLQKMA-------RRPREATVGINSEDGAAYIRE--------EAGKGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKTE----LFPETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVE-GEGF--VRSPYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRALA 2049 P+ AP ++DW+++R V IC LG+ G S +P +VG+AGP GAGKST+ASM++ + DV+ F R++WL VG+GA+DRL +M+ LA V E V+ + R P+ +G+ EDGAAY+RE + G LVVADD+W+AEVLAELR GA ++YTTR E + +R++EV E EAE +LRRAADL + +LP AA+++++R +D+A VGRW +R + + AW L +I+ Q G LLPWR+AVLR GL L + T ELY +L +LP L+F V + D S L+AA + TLE+ S+L E G Y VH +H D T +AL RWR +S+ A+ + + L +W+ + +E GEG + PY+ + A M+ SD + LRR A F + + A +S LL E +A D PDV I++ LG A GR E EG+ RR LA Sbjct: 305 PAEAPLLQDWFIQREPVVAAICDRLGVNDRGG--SRASGEPPVVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVGQGARDRLLDVMYRLAVMVHELVVNSSSFPDDGPFRPPQPPDIGVEPEDGAAYVREILTADEGERSSGGFGELLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAASGGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHVIDAQNFM-KGAALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSF--SVGDVTALVSDGSAEELQAATLAITTLEQWSVLVRTEG-GRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDA-MNLSDAGAFQLLRRIAFFQWMTNEPDAACMSWSKLLASGEDSAAND-PDVHAIMYTLGAHALVSGRTHEAEGWFRRTLA 812
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 289 bits (739), Expect = 2.710e-76 Identity = 247/727 (33.98%), Postives = 353/727 (48.56%), Query Frame = 1 Query: 82 TYIREFTAGAATLLQEIPAVGIACKTYLTFEVLVQTATSNKHELSVLGELIDLVLQRYVKRCAEKEQGV-----RQELLSLENHIKSAQDVAG-LCNGKGLKRLKQLALCRRICNDIESVRKNVLHFCNVNNL--VLTSELSFKLDDVARLLEAQDQTLKEVMEKPGRVNIPSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPG-EQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGGRVLWLSV-GKGAKDRLPTLMFELANRVRETVLQ--------KMARRPRE-ATVGINSEDGAAYIREEAG-------KGD------------TRFLVVADDVWDAEVLAELRRAGAWVIYTTRKTELF---------------PETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLP---WRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEA----------VLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKV-WEKLAKVEGEGFVRSPYNAALSAIMDDSDGELLEA-LRRAAEFHFCREDWSEAFDKYSDLL------LIKEQTAGPDHPD-------VAKILHNLGMCACEVGREKE 2019 TY + +A A L C+ + + LV S ELS L + D V + + C +G + + +L H+++A+ VA LC + L RL R++ ++ ++ LHF ++ + T E ++ + VA L +V +PS AP I+ WY+ R +C LG+ + + + E+PRMVGLAGP G GKSTV S+VV + DV+A+F ++WL V GKGA+ RLP LM LAN V ET+L+ K R PR V + E+GAAYIR G +GD R+L+VADDV++ EVL EL+ GAWV+YTT ++ F +RL+ + + E E +LRRA+ L +A LP A +L+K V+DLA +GRWG +R + +AW AAL+S+ GGDGGQ W AVL AG+ LA N + +LY +LA+LP GL+F P A LL+G A +AA+A VLG LER S+L LEE G Y +H +H DFV + +R AL RWR + S+ AL + ++ W L+ + PY+A L MD SD + A L R A+ + A KY+ L+ L +E G D +A LHNLGM A +G +E Sbjct: 100 TYTKGSSAAACAL----------CEALVELDHLVHK--SGHKELSSLVSVFDCVARGVLLCCEHPAEGAGGGGCARSVETLTQHVENAKKVAATLCVKRRLARLSSSK--RQLERELRNLTDE-LHFFATHHTPELATDESGYERNRVAFLAS--------------KVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPRMVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVACDRENGAAYIRGALGITFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDHADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVFLE---GGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEG-GRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDG-MDQSDADTFSAVLERVAQVQALAGNLEGAHAKYTRLVGVTESRLEREAAGGGDSIRQAGAELLLADRLHNLGMIAGGLGSTEE 792
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 266 bits (681), Expect = 2.310e-70 Identity = 206/672 (30.65%), Postives = 341/672 (50.74%), Query Frame = 1 Query: 88 IREFTAGAATLLQEIPAVGIACKTYLTFEVLVQTATSNKHELSVLGELIDLVLQRYVKRCAEKEQGVRQELLSLENHIKSAQDVAGLCNGKGLKRLKQLALCRRICNDIESVRKNVLHFCNVNNLVLTSELSFKLDDVARLLEAQDQTLKEVMEKPGRVN-IPSGAPSIRDWYVERVGVAGQICHHLGIGTSNGIPSFPGEQPRMVGLAGPGGAGKSTVASMVVTQVDVQAFFGGRVLWLSVGKGAKDRLPTLMFELANRVRETVLQKMARRPREATVGINSEDGAAYIR---EEAGKGDT-RFLVVADDVWDAEVLAELRRAGAWVIYTTRKTELFPET--PAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSI-IETQRAG----GDGGQLLPW--RAAVLRAGLGVLA--SDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRS-PYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTAGPDHPDVAKILHNLGMCACEVGR--------EKETEG 2028 I + + A L +E+P + KT V+T +N+ EL+ L + + +V +C E V ++ L++ +++A++ A C+ +G ++ ++ ++I + +V L + L K+DD+ + L+ DQ L+ + G++ +P GAP + W+VER + L NG ++ +V LAG G+GK+TVA+ +V +V+ F ++WL V +GAK RLP+LM +LA V E + + R P SED A YI+ EE KG + LVVAD+VW+ +V+++L G WV+ +TR + + A+ ++E+ + +AE +L+RAA+L ++RLP A +L+K C +D+A VGRW +R R +W A +I E ++ G D + +P R A+L+ G LA SD+ + LY +LA++P G AF + A +LLY S +A V+ LER SI+ + G Y +H+ H DF + L + + R AL RW RY+SS+ L + L +W + ++ G+G+ ++ PY AL +++ SD L F +ED A + LL ++++ G DHP V NL + A +G EKE EG Sbjct: 23 ISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEV--DVAPLKDCVEAAKNFAERCSRRG--KVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDAL-----NGS-----DRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVP------SASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQ--GTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLE-SDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEG 671
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Match: D7G246_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G246_ECTSI) HSP 1 Score: 253 bits (645), Expect = 3.300e-69 Identity = 168/362 (46.41%), Postives = 201/362 (55.52%), Query Frame = 1 Query: 967 KGDTRFLVVADDVWDAEVLAELRRAGAWVIYTTRKTELFPETPAIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALK---AAEAVLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLAKVEGEGFVRSPYNAALSAIMDDSDGELLEALRRAAEFHFCREDWSEAFDKYSDLLLIKEQTAGPDHPDVAKILHNLGMCACEVGREKETEGYLRRA 2043 +G R LVVADDV +AEVL EL+ GA +M+LRRAADL E A LP A YELM+RC+F VLD+A VGRWG +R R E+AW+ ALD I+E Q AGG+G L WRA+VLRAGL LA DNP ELY ALA+LP GL FP EVA LLY D S L+ AE V TLER SIL + G Y VH+ H DF+ T+D L RWRRYISSVRAL L K+W+ LA + + PY+ AL A MD EL AL A F+ RED A +S LL ++E T D V + L +L + A GR +E E RRA Sbjct: 5 EGRERVLVVADDVREAEVLQELKTEGA----------------------------DMVLRRAADLDESAVLPDAGYELMRRCEFVVLDIAFVGRWGVVRGRRKEKAWQMALDRILEAQ-AGGEGVGPLSWRASVLRAGLEELAVDNPLNKELYLALAVLPMGLTFPSEVAAALLYDDALSGEDLEDLEVAEEVAATLERWSIL-IRMGGGNYRVHDEHSDFIRGCLSTNKDTQDRVLRRWRRYISSVRALLACEPEDLVKIWDSLASDQDDVIDPRPYDRALEA-MDMPSAELPRALHLAGFFYMVREDGEGACSTFSKLLKLQETTVTSDGLIVWETLRSLHLSAYMSGRWEEAEVTQRRA 335 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17695.1 >prot_E-siliculosus-1a_M_contig98.17695.1 ID=prot_E-siliculosus-1a_M_contig98.17695.1|Name=mRNA_E-siliculosus-1a_M_contig98.17695.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=838bp MEAPDGVSVLTYIREFTAGAATLLQEIPAVGIACKTYLTFEVLVQTATSNback to top mRNA from alignment at E-siliculosus-1a_M_contig98:121802..127904- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17695.1 ID=mRNA_E-siliculosus-1a_M_contig98.17695.1|Name=mRNA_E-siliculosus-1a_M_contig98.17695.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6103bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:121802..127904- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:121802..127904- >mRNA_E-siliculosus-1a_M_contig98.17695.1 ID=mRNA_E-siliculosus-1a_M_contig98.17695.1|Name=mRNA_E-siliculosus-1a_M_contig98.17695.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5028bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:121802..127904- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |