mRNA_E-siliculosus-1a_M_contig98.17692.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: A0A6H5KNK6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK6_9PHAE) HSP 1 Score: 889 bits (2297), Expect = 5.550e-315 Identity = 466/487 (95.69%), Postives = 473/487 (97.13%), Query Frame = 3 Query: 12 LGAGGGEDAAAAAGLLMSESRTSRGSRGSRDPKSTDRKSRRRSGRXXXXRDSGEGRQSTEWAEGTPGGQGSPRGTVAYGTPSGIGRDGSINGSSQRRRGSRSRRDSDGSVREDQSAGSVSGSVPESPSALVTPARSRSGRAGAPRSAGRKAHRPRSKKARDSFGGIAAGAQNRPSEEGQGVPNSPGGSPKKRWQRWRGNNKFFCGGRIMLGVHYRQLMTTTMLLFLTWLLFFIFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGNTVHGGVSYTANAYTELQEVIRPQGGDLV 1472
LGAGG EDAA GLLMSESRTSRGSRGSRDPKSTDRKSRRRSGRXX +DS EGRQSTEWAEGTPGGQGSPRGTVAYGTPSGIGRD S+NGSSQRRRGSRSRRDSDGSVREDQS GSVSGSVPESPSALVTPARSRSGRAGAPRSAGRKAHRPR+KKARDSFGGIAAGA NRPSEEGQGVP SPGGSPKKRWQRWRGNNKFFC GRIMLGVHYRQLMTTTMLLFLTWLLFF+FILPSYGRWSFA+VAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDS NLPGSR VSPVLG+WTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTG+TVHGGVSYTANAYTELQEVIRPQGGDLV
Sbjct: 342 LGAGG-EDAA---GLLMSESRTSRGSRGSRDPKSTDRKSRRRSGRXXSSKDS-EGRQSTEWAEGTPGGQGSPRGTVAYGTPSGIGRDSSVNGSSQRRRGSRSRRDSDGSVREDQSVGSVSGSVPESPSALVTPARSRSGRAGAPRSAGRKAHRPRTKKARDSFGGIAAGAHNRPSEEGQGVPISPGGSPKKRWQRWRGNNKFFCEGRIMLGVHYRQLMTTTMLLFLTWLLFFVFILPSYGRWSFAMVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRLVSPVLGMWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGHTVHGGVSYTANAYTELQEVIRPQGGDLV 823
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: D7FZN5_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN5_ECTSI) HSP 1 Score: 742 bits (1916), Expect = 3.320e-263 Identity = 397/436 (91.06%), Postives = 401/436 (91.97%), Query Frame = 3 Query: 60 MSESRTSRGSRGSRDPKSTDRKSRRRSGRXXXXRDSGEGRQSTEWAEGTPGGQGSPRGTVAYGTPSGIGRDGSINGSSQRRRGSRSRRDSDGSVREDQSAGSVSGSVPESPSALVTPARSRSGRAGAPRSAGRKAHRPRSKKARDSFGGIAAGAQNRPSEEGQGVPNSPGGSPKKRWQRWRGNNKFFCGGRIMLGVHYRQLMTTTML-------LFLTWLLFFIFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 1346
MSESRTSRGSRGSRDPKSTDRKSRRRSGRXXXXRDSGEGRQSTEWAEGTPGGQGSPRGTVAYGTPSGIGRDGS+NGSSQRRRGSR+RRDSDGSVREDQS GSVSGSVPESPSALVTPARSRSGRAGAPRSAGRKAHRPRSKKARDSFGGIAAGA NRPSEEGQGVPNSPGGSPKKRWQRWRGNNKFFC GR R L L W LPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYR+FMAFIIL+TISSSLVCAMSVVHTVTRTGHVGPMYLTDS NLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP
Sbjct: 1 MSESRTSRGSRGSRDPKSTDRKSRRRSGRXXXXRDSGEGRQSTEWAEGTPGGQGSPRGTVAYGTPSGIGRDGSMNGSSQRRRGSRNRRDSDGSVREDQSVGSVSGSVPESPSALVTPARSRSGRAGAPRSAGRKAHRPRSKKARDSFGGIAAGAHNRPSEEGQGVPNSPGGSPKKRWQRWRGNNKFFCEGRFFFRGGGRGTQGGGSLGSGVGGVAALAWSECCCS-LPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRSFMAFIILITISSSLVCAMSVVHTVTRTGHVGPMYLTDSVNLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQP 435
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: D8LTN2_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN2_ECTSI) HSP 1 Score: 283 bits (725), Expect = 3.370e-86 Identity = 152/292 (52.05%), Postives = 196/292 (67.12%), Query Frame = 3 Query: 570 GSPKKR---WQRWRGNNKFFCGGRIMLGVHYRQLMTTTMLLFLTWLLFFIFI-LPS--YGRWSF-ALVAACLCTGCFVSLVFSSFLDPGIIPRRAAS--GLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVT-RTGHVGPMYLTDSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGNTVHGGVSYT 1415
GS +KR W+ W+GN FF GGRI++G H R L + +L T LFF FI LP+ YG W+F + V+ CL GC +SL ++ +DPGIIPRR + D DV ++ S C+TC + RPPR KHCK CNNCV+ FDHHCP+TGNC+GARNYRAFMAFI +VTIS CA+SV+H V R +VGP+ L + A +PGS+F +L LWTA++ VLVG LL FH++L+AKGQTTNEYLR E G+ R F +C ELWCG +P S+L+DM+E + GG T
Sbjct: 4 GSLRKRRQQWECWQGNANFFAGGRIVVGSHCRALAFSATILLFTATLFFTFISLPATTYGGWAFFSTVSVCLFVGCIISLASTAMMDPGIIPRRTLALWNSLDPASPDVAERKS-CVTCQLARPPRAKHCKRCNNCVMEFDHHCPFTGNCIGARNYRAFMAFISIVTISEFFACALSVLHIVAPRADNVGPVLLVNWARIPGSQFFPHLLALWTAVVMVLVGGLLSFHIFLVAKGQTTNEYLRREAPSGSRLGRPFLSSCHELWCGARPPSLLSDMTESVNTDNSAGGTDDT 294
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: A0A835YZ83_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ83_9STRA) HSP 1 Score: 268 bits (686), Expect = 5.960e-80 Identity = 136/299 (45.48%), Postives = 183/299 (61.20%), Query Frame = 3 Query: 507 IAAGAQNRPSEEGQGVPNS-PGGSPKKRWQRWRGNNKFFCGGRIMLGVHYRQLMTTTMLLFLTWLLFFIFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKR--RGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGNTV 1394
+ GA RP G P S + +K WQ+WRGN +F C G++MLGVH QL T L+ TWLLF +F+ P+Y W V A + C V+L ++ +PGIIP + S + + R +L+YCITCHIVRPPR KHC+HCN CV FDHHCPW GNC+G RNYR+F+ F+I++ +S +H +TR G+VGP LT + +PGS +VSP LG+W ++T +VG LL H+YLL +GQTTNE+L+GE RG V + C LWC P S+L E+ T + V
Sbjct: 20 LDQGAPPRPKRPGSNRPPSLTVTTERKWWQQWRGNARFLCDGKLMLGVHCDQLWVTGSLILGTWLLFLVFVAPNYTGWWCVGVGAAMLVLCLVTLAETAVTEPGIIPPQPRSDAAEGMSASTRGKLNYCITCHIVRPPRAKHCRHCNVCVRRFDHHCPWIGNCIGHRNYRSFLRFLIVLAXXXXXXXXLSAIHALTRLGNVGPEDLTSQSGVPGSEYVSPFLGVWALLVTAIVGGLLLLHMYLLFQGQTTNEFLKGEPVHVRGRVMRK-----CLLLWCERLPPSLLPPFDEYPTQDDV 313
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: A0A7S3UWP6_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWP6_HETAK) HSP 1 Score: 232 bits (591), Expect = 9.170e-66 Identity = 111/244 (45.49%), Postives = 150/244 (61.48%), Query Frame = 3 Query: 747 LVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLT----DSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGNTVHGGVSYTANAYTELQEVIRPQGGD 1466
L A L L+ ++ DPGIIPR S L +S+P +++++++YC TCHIVRPPRTKHC+HCNNC+ TFDHHCPWTGNC+G RNYR F F++ +T SS+ V MS + + Y D + G +F++P+L LWT ++T LVGALL FH+ LL +GQTTNEYLRGEK RG++PH + NC LWC P S L M E + +A + LQE ++ + D
Sbjct: 4 LAGAALMAASVAFLLVTALRDPGIIPRHPPSQLVESMPPEMKEKMNYCPTCHIVRPPRTKHCRHCNNCIQTFDHHCPWTGNCIGRRNYRFFYLFLMSITASSAYVLVMSANYLTRHLTDIDSKYFDAIFKDEWKIKGGQFIAPLLILWTLLVTTLVGALLVFHIILLGRGQTTNEYLRGEKNRGDIPHGNIFTNCGNLWCHDMPESRLLPMWEHPGKEDDDRNLKAAVDAMSSLQEAMQARTED 247
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: A0A812WJG5_SYMMI (Palmitoyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WJG5_SYMMI) HSP 1 Score: 203 bits (516), Expect = 5.450e-55 Identity = 115/295 (38.98%), Postives = 163/295 (55.25%), Query Frame = 3 Query: 579 KKRWQRWRGNNKFFCGGRIMLGVHYRQLMTTTMLLFLTWLLFFIFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMS---VVHTVTRTGHVGP--MYLTDSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGPNCRELWCGTQPASMLADMSEFSTGNTVHGGVSYTANAYTELQEVI 1448
K R+Q W G NKF CGGRIM+G H L+ + LL +T+ LF + ++P + L G L+ ++ +PGIIPRR S L +S+ ED R +L YC TC IVRPPR KHC++C+NCV FDHHCPWTG C+G RNY F FI L T+S++ C+ S +V H MY+ D V+P++ +T ++ VLVG+LL FH++L+ + QTTNE+LRG + + S N +L + P S L M E + + + A A ++ I
Sbjct: 83 KFRYQLWEGKNKFLCGGRIMMGAHSNHLLLSITLLVVTYSLFLLGVVPLLHMPILFYIGVGLAVGTLTFLLLTALTEPGIIPRRPPSKLLESMSEDARQKLQYCHTCRIVRPPRAKHCRYCDNCVEVFDHHCPWTGTCIGVRNYAYFCVFITLATVSAAFACSTSAYLIVQWAEGRNHEPRLLMYIRD--------VVAPLVCAFTLLVFVLVGSLLAFHLFLIGRQQTTNEFLRGVRPSHSDYKNSTTGNVVKLCNTSIPDSKLLPMWEKCQADDIERSSNAVAQAINSMRSAI 369
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: A0A7R9UDC7_9STRA (Palmitoyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC7_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.830e-50 Identity = 98/235 (41.70%), Postives = 145/235 (61.70%), Query Frame = 3 Query: 579 KKRWQRWRGNNKFFCGGRIMLGVHYRQLMTTTMLLFLTWLLFFIFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRR 1283
KK +++W+G N F GRIMLG QL T +L+ +TW +F I+P +++ L T V+L+ ++ DPGI+PRR S + +S+P +++++ YC TCHI++P RTKHC+ C+NCV FDHHCPW GNC+GARNYR F+ FII ++ V ++S+ ++ TG + D R ++ VL WT ++T LVGAL FH L+ GQTTNEY++ + R
Sbjct: 114 KKHFEQWKGRNSFLLRGRIMLGAMAHQLGITLVLMLITWGIFLCLIVPLLRNAVLVVLSFMLFTTQLVALLCTALTDPGILPRRPPSAVVESMPMQMKERMHYCPTCHIIKPHRTKHCRICDNCVQEFDHHCPWVGNCIGARNYRFFLLFIISTVLACVFVLSVSLYAFLSGTGGLIVQVQDDPGADTVLRVLALVLVFWTFLLTALVGALTFFHCSLMCMGQTTNEYVKAARAR 348
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: F0Y087_AURAN (Palmitoyltransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y087_AURAN) HSP 1 Score: 181 bits (459), Expect = 1.760e-47 Identity = 96/234 (41.03%), Postives = 139/234 (59.40%), Query Frame = 3 Query: 582 KRWQRWRGNNKFFCGGRIMLGVHYRQLMTTTMLLFLTWLLFFIFILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASGLPDSIPEDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVT-RTGHVGPMYLTDSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKR 1280
KR+++W GNN FFCGGR+MLGV +L+ T +L+ TW F P+ + A + CFV L ++ DPGI+PR S +P + + ++++C TC I+RPPR KHC++C+NCV FDHHCPW G CVGARNYRAF+ F++ + VC+ + + V T H Y+ G V+ + W+A++ + V L+ FH+YL+ QTTNEYLR E+R
Sbjct: 27 KRYEQWPGNNFFFCGGRLMLGVDCDRLLATALLIATTWAGHFFVTWPNLD-FDERCGAGGIAVLCFVCLAAAATRDPGIVPRLPRSDRLSGLPCETQYRMNWCQTCQILRPPRAKHCRYCDNCVRVFDHHCPWLGTCVGARNYRAFVLFLVWTLAGALYVCSRAARYLVRCSTVHACSAYVDF-----GRPIVAGISVAWSAVVALPVATLIAFHLYLMGHDQTTNEYLRDERR 254
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: A0A6B2LA05_9EUKA (Palmitoyltransferase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LA05_9EUKA) HSP 1 Score: 147 bits (371), Expect = 2.140e-35 Identity = 111/320 (34.69%), Postives = 160/320 (50.00%), Query Frame = 3 Query: 582 KRWQRWRGNNKFFCGGRIMLGVHYRQLMTTTMLLFLTWLLFFIF-------ILPSYGRWSFALVAACLCTGCFVSLVFSSFLDPGIIPRRAASG--------LPDSIP-----EDVRDQLSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTVTRTGHVGPMYLTDSANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKRRGNVPHRSFGP--NCRELWCGTQPASMLADMSEFSTGNTVHGGVSYTANAYTELQEV-IRPQGGDLV 1472
K ++ W G NKF+CGGR + + T L + +LF+IF +LP G +L CL SL+ +SF+DPGIIPR + LP SI + + +C TC + RPPR+ HC C+NCV+ FDHHCPW GNCVG RNYR F+ F+ +S++VCA + T G L +++P +S VL ++ +I V +L +H+YL+A G TTNE ++ R P+ S GP N + CG + S L + E T V Y + EL+E+ + P+ LV
Sbjct: 3 KIYELWPGRNKFYCGGRFITAKNSEGFYGTLGLTVIPTILFWIFSCVPLREVLPIIG----SLFGTCLMMS---SLLMTSFMDPGIIPRTKSPAPEEEGEEKLPQSIAMTTPHKTFTFESKWCNTCKLYRPPRSSHCSICDNCVMEFDHHCPWVGNCVGKRNYRYFVIFVWSAIFNSAVVCATTAYQAYT-VGKTAGGILPAISSIP----MSAVLFVYCIIIIFTVMSLGGYHLYLIASGITTNEDMKHTFEREMSPY-SKGPVSNFYYILCGPRYPSYL-QLREEITELQFEEVVYYEEDPNGELKEIKVEPKPAPLV 308
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Match: A0A6A5C2S5_NAEFO (Palmitoyltransferase n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C2S5_NAEFO) HSP 1 Score: 149 bits (376), Expect = 2.940e-35 Identity = 98/265 (36.98%), Postives = 137/265 (51.70%), Query Frame = 3 Query: 582 KRWQRWRGNNKFFCGGRIMLGVHYRQLMTTTMLLFLTWLLFFIFILPSYGRWSFALVAACLCTG-------CFVSLVFSSFLDPGIIPRR-------AASG---LPDSIPEDVRDQ-----------LSYCITCHIVRPPRTKHCKHCNNCVLTFDHHCPWTGNCVGARNYRAFMAFIILVTISSSLVCAMSVVHTV---TRTGHVGPMYLTDS-ANLPGSRFVSPVLGLWTAMITVLVGALLCFHVYLLAKGQTTNEYLRGEKR 1280
K +Q W GNN C GRI++G + + T +L+F+ +++ I+P Y + L + L ++SF DPGIIPRR A +G + D PE + Q L YC +C I RPPRT HC+ CNNCV FDHHCPWTG C+G RNYR+F+ FI TI+S LV + + HTV T ++ + D AN VL ++ + + VG+L FH YL++ GQTT EY+ K+
Sbjct: 116 KLYQAWIGNNTLCCKGRIIIGPDRKLFILTLILMFIPAIIYAPVIMPHYLLFVHPAAGVILLIVPLIGFLLMLIGLFYTSFTDPGIIPRRKYIDQQFARTGEEKIDDRKPEPPQFQKVHLENGQIVELKYCPSCEIYRPPRTSHCRRCNNCVERFDHHCPWTGTCIGRRNYRSFILFIFSTTITSWLVIFICIAHTVLVWTYYFNINTDTIPDKVANSVRYSIGGLVLIVYIFLTQLFVGSLSVFHAYLISTGQTTYEYVNKAKK 380 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17692.1 >prot_E-siliculosus-1a_M_contig98.17692.1 ID=prot_E-siliculosus-1a_M_contig98.17692.1|Name=mRNA_E-siliculosus-1a_M_contig98.17692.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=472bp MSESRTSRGSRGSRDPKSTDRKSRRRSGRRRSSRDSGEGRQSTEWAEGTPback to top mRNA from alignment at E-siliculosus-1a_M_contig98:99193..106741- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17692.1 ID=mRNA_E-siliculosus-1a_M_contig98.17692.1|Name=mRNA_E-siliculosus-1a_M_contig98.17692.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7549bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:99193..106741- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:99193..106741- >mRNA_E-siliculosus-1a_M_contig98.17692.1 ID=mRNA_E-siliculosus-1a_M_contig98.17692.1|Name=mRNA_E-siliculosus-1a_M_contig98.17692.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2832bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:99193..106741- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |