mRNA_E-siliculosus-1a_M_contig98.17683.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: A0A6H5L384_9PHAE (Cytochrome b561 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L384_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 8.290e-130 Identity = 193/202 (95.54%), Postives = 198/202 (98.02%), Query Frame = 3 Query: 147 MIGMMTTVLGLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKDRMGKNHWTSWHSWAGVLALALWVGSVALAGANTADLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAWALTAGVLGVFVGIVASGGEAQAPKK 752
MIGMMTTVLGLGLALFISLE Y+QGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNK++MGKNHWTSWHSWAGVLALALWVG+ A+AGANTADLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAW LTAGVLGVFVGIVASGGEAQ PKK
Sbjct: 1 MIGMMTTVLGLGLALFISLEGYNQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNFAVAGANTADLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAWTLTAGVLGVFVGIVASGGEAQTPKK 202
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: A0A812RVE1_9DINO (Aste57867_9460 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RVE1_9DINO) HSP 1 Score: 80.9 bits (198), Expect = 1.250e-13 Identity = 70/196 (35.71%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 168 VLGLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHA---VGGMGPKTQR--VQLHSALSNLALASMLG-GLYAIYTNKDRMGKNHWTSWHSWAGVLALALWVGSVALAGANTADLEKRRLVFL----WKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAWALTAGVLGVFVGIVAS 725
+L G+ +S A G F FL+ V +GL AG+ + + A + G P R + + ++N+AL ++ G +AI+ NK+ GK H+TSWHSWAG+ LALW+ ++AL +RLV L W+ HR G A LGAVV G+ S WG +LG W LTA +G+VAS
Sbjct: 13 LLAAGIYFTLSQRALEFFG-FRVQLFLVHVLCMGL--AGVVLLPTTTACIAMRGRAPAALRKVLAVSHGVTNIALVAVSAVGFWAIFQNKNLHGKAHFTSWHSWAGLATLALWLMNLALG--------LQRLVALGSWQWRHVLHRLVGTLAGTISLGAVVTGIWSQWGQAALGAHL-QWILTA-----LIGLVAS 191
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: A0A7S0IWR2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IWR2_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 8.970e-13 Identity = 66/168 (39.29%), Postives = 82/168 (48.81%), Query Frame = 3 Query: 225 LFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGM------GPK-----------TQRVQLHSALSNLALASMLGGLYAIYTNKDRMGKNHWTSWHSWAGVLALALWVGSVALAGANT-AD-LEKRRLVF----LWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLG 659
LF WH L + L L TA + AVR R A M G K T+ V+ H LS AL S GL +I+ +K R+G+ H TS HSW G LW+ + A + AD L RL + LW S +HR AG AA+ LGAV GL S WG +LG
Sbjct: 7 LFRWH-VLSLLPILPLGTAAVGAVRERTARVKMRGTNITGKKAVPAGARKKRATRYVKAHFVLSLSALYSAGFGLASIWLHKQRLGRAHLTSLHSWLGCATFLLWLSAYLNAQPHVWADVLRDGRLAYRPRWLWASASHREAGNAAYTLSLGAVASGLMSPWGQHALG 173
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: A0A485KMY0_9STRA (Aste57867_9460 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMY0_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.200e-12 Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 3 Query: 225 LFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKDRMGKNHWTSWHSWAGVLALALWVGSVALAGANTADLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSG-WGLRSLGGERGAWALTAGVLGVFVGIVA 722
LF+WHP +++ L + + A+ R G + VQ H + L + M G AIY NK++ + H+TS HSW G AL + + T ++ + WK HR++G AF AV G +SG WG +LG ++G A +A + + V +VA
Sbjct: 29 LFSWHPITLALAYLLATPSALIAMSDRRGETNHGKRIALVQWHVLMQILTVILMTIGFGAIYVNKEKNNRPHFTSIHSWIGCTALGFYYMNFFFGMFKTYG---GKVNWQWKDTAHRYSGTLAFLTSGVAVAYGFYSGGWGRANLG-QQGQLAASAAIALLHVAVVA 191
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: UPI00065BA430 (cytochrome b561 domain-containing protein 2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BA430) HSP 1 Score: 72.0 bits (175), Expect = 1.930e-10 Identity = 49/175 (28.00%), Postives = 82/175 (46.86%), Query Frame = 3 Query: 147 MIGMMTTVLGLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKDRMGKNHWTSWHSWAGVLALALWV-----GSVALAGANTADLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSL 656
M+ + VL G+ ++ A LF+WHP LM++G + L GI ++ + +V +HS + + + G+ AIY NKDR GK+H+T+WH G++ +A G++A K +L L H +G A+ + VLGL S W + ++
Sbjct: 18 MVAHLAAVLFPGIIIY---SAVPGSSLFSWHPTLMAIGFVLLMFEGIVVFSKSSSLYPTASRPSKVTVHSYVIGVGVTCAFAGVAAIYVNKDRAGKDHFTTWHGLIGIITMAYCCAQSCGGALAKYYKYVGGFIKVKLADL--KLYHATSGLFAYTLVTASFVLGLQSNWAVNNI 187
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: A0A7S0M9S9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M9S9_9CRYP) HSP 1 Score: 70.9 bits (172), Expect = 3.420e-10 Identity = 47/168 (27.98%), Postives = 81/168 (48.21%), Query Frame = 3 Query: 174 GLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKDRMGKN------HWTSWHSWAGVLALALWVGSVALAGANTADLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLG 659
G L+LF + + LF++HP L+ G L L I+ ++ K +VQ H ++ + +AS +GGL+AI+ NK+ M + H S H+ G A AL + + + + T + + WK + HRW G ++ A++L ++ WG +LG
Sbjct: 20 GTALSLFFAYKVKFPSTLFSYHPTLLGFGWLALTPFAIKYLKESKKETKKEAKIDKVQKHGYINTVVIASTIGGLFAIWRNKELMAASKKQVAKHLVSLHAKVGAAAAALALLAFSTSLYKTYIRKVGTTDYTWKDKLHRWLGILSYLTSGLAILLIVNGPWGKFNLG 187
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: A0A5J4NE61_9TREM (Ascorbate ferrireductase (transmembrane) n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NE61_9TREM) HSP 1 Score: 70.1 bits (170), Expect = 7.630e-10 Identity = 53/165 (32.12%), Postives = 77/165 (46.67%), Query Frame = 3 Query: 207 AYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVG-GMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKDRMGKNHWTSWHSWAGVLALALWVGSVALAGANTADLEKRRLVFLWK------------SRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGG 662
A+ LFA+HPF +S+ L L G++ + RH + P+TQ ++ H + +A ++ G AIY NK R GK+H+T+WH G+L L L+V LAG VF WK S H ++G ++LGL S W L G
Sbjct: 29 AFPMDNLFAYHPFFVSIAMLVLMPYGVR-IMDRHVCWLPVRPRTQMIKWHWIVQCIASMLLILGGAAIYLNKTRSGKSHFTTWHGLCGLLTL-LYVAIQLLAG----------FVFHWKLWPIRLLTHNQASLYHAYSGFGLLILSTLTILLGLQSSWVASKLRG 181
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: C3YV41_BRAFL (Ascorbate ferrireductase (transmembrane) n=4 Tax=Branchiostoma TaxID=7737 RepID=C3YV41_BRAFL) HSP 1 Score: 67.4 bits (163), Expect = 4.360e-9 Identity = 49/162 (30.25%), Postives = 72/162 (44.44%), Query Frame = 3 Query: 183 LALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKDRMGKNHWTSWHSWAGVLALALWVGSVALAGANTA--DLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGG 662
LA + A+ LF+WHP LM G L T I ++ + +V+ H L A+ +GGL AIY NK+RMGK+H+ SWH GV + V ++ G N L K + H G + ++ LG++S W + L G
Sbjct: 10 LAAVVIYTAWPGSSLFSWHPTLMVTGYGLLMTEAILMFSPESSLMINAMRKSKVRFHWILQAGAVVCAVGGLMAIYLNKERMGKDHFVSWHGLIGVTTVFYSVVQ-SMGGINLLYPKLLKSWMTLAQLKMYHATFGLLGYALACSSLALGINSNWFSQELEG 170
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: A0A830HE37_9CHLO (Cytochrome b561 domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HE37_9CHLO) HSP 1 Score: 62.0 bits (149), Expect = 3.840e-7 Identity = 49/148 (33.11%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 216 QGGLFAWHPFLMSVGALGLPTAG-IQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKDRMGKNHWTSWHSWAGVLALALWVGSVALAGANTADLEKRRLVFLWKSRNHRWA---------GKAAFCAGLGAVVLGL 629
G F +HP M++ L G + A++ R G +T + H++L +L + + G YAIYTNK GK H+TS+HS+AG+LA L + + L GA + +RL L + WA G+ GL A+VL L
Sbjct: 30 DGSRFGYHPSCMALAYLLFMAEGALTAIKFRSLEG--PERTTAIWKHASLQSLGVLFAIIGFYAIYTNKSIHGKPHFTSYHSYAGLLAFVLAIVA-PLGGA----VSFKRLGLLTRLPQQHWAPIKYVHRKVGQVTVFVGLLAIVLAL 170
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Match: A0A8J1Z322_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z322_9DINO) HSP 1 Score: 63.2 bits (152), Expect = 3.870e-7 Identity = 59/197 (29.95%), Postives = 82/197 (41.62%), Query Frame = 3 Query: 159 MTTVLGLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGM-----------GPKTQRVQ---------LHSALSNLALASMLGGLYAIYTNKDRMGKNHWTSWHSWAGVLALA----LWVGSVALAGANTADLEKRRLVFLWKSRN----------HRWAGKAAFCAGLGAVVLG---LHSG 638
+ +++G+ L L LF WHPF +G L L T+GI H + G P + V H+ L A+ +ML AIYTNK+RMGK H+TS H G++ + + SV L L R+V K R HR AGK + A LG + LG +H+G
Sbjct: 45 IVSLIGITLFLGTLYAGPDSSKLFFWHPFFAILGVLPLGTSGIFINMHNHKLKGAYKGQVNSGSDGAPGSSDVLNKYLFFPNIWHNVLMLCAVVAMLVSFGAIYTNKERMGKPHFTSIHGKVGLMVVVGYTLIAATSVVLLWGYPQKLPSSRVVAFLKIRLGIVMRSIASLHRVAGKLCYVASLGVMALGWWAIHAG 241 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 18 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig98.17683.1 >prot_E-siliculosus-1a_M_contig98.17683.1 ID=prot_E-siliculosus-1a_M_contig98.17683.1|Name=mRNA_E-siliculosus-1a_M_contig98.17683.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=204bp MIGMMTTVLGLGLALFISLEAYSQGGLFAWHPFLMSVGALGLPTAGIQAVback to top mRNA from alignment at E-siliculosus-1a_M_contig98:27917..32126- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig98.17683.1 ID=mRNA_E-siliculosus-1a_M_contig98.17683.1|Name=mRNA_E-siliculosus-1a_M_contig98.17683.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4210bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:27917..32126- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig98:27917..32126- >mRNA_E-siliculosus-1a_M_contig98.17683.1 ID=mRNA_E-siliculosus-1a_M_contig98.17683.1|Name=mRNA_E-siliculosus-1a_M_contig98.17683.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1224bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig98:27917..32126- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |