mRNA_E-siliculosus-1a_M_contig97.17677.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 406 bits (1043), Expect = 1.030e-134 Identity = 265/313 (84.66%), Postives = 275/313 (87.86%), Query Frame = 2 Query: 2 GGEPGWQGWGGDERTLLGAAACGNKSDVMVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLGNVDGDSPLHLAAEAGHHRVIRILLLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELLMGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRSPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIFTPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVK 940 GGEPGWQGWG ERTLLGAAACGNKSDVMVQALLEAGET+FVN FG+T ESALHVTVARGAEDASKAL++AGADP LGNVDGDSPLHLAAEAGHHRVI ILLLRKEAQ+ADP NLFLET LCISELLMGGADKDV DGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SRGN AMLKAFLD+ SREVDA D RGWTALHYAAY DR V D+GDAVRALLEAGADVNVKTDAHA+DDIFTPLHVAVNRRMASIC IXXXXXXXXXXXXXXX NQTPLH+ACMWGNVSGV+ Sbjct: 62 GGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVE 374
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: A0A6H5JB39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB39_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 2.340e-131 Identity = 273/403 (67.74%), Postives = 291/403 (72.21%), Query Frame = 2 Query: 38 ERTLLGAAACGNKSDVMVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLGNVDGDSPLHLAAEAGHHRVIRILLLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELLMGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRSPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIFTPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEIDADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHIACRSRSSCSSSNSKVARVSGEDSDENDM 1246 ERTLLGAAACGNK+ RGA+DASKALV+AGADP LGN DGDSPLHLAAEAGHHRVI K+AQAA PRN+FLETP +AAAMG TLCISELLMGGAD+DVDDGKGE XXXXXXXXXXXXXXXXXXXXXXXXXX YRSPLQ AASR VDA DNRGWTALH AAY DRPV D+GDAVRALLEAGADVNVK DAH +DDIFTPLHVAV+R MASICTIXXXXXXXXXXXXXXX NQTPLH+ACMWG++SGV+ DEDRND+EI+ADNQ IR VLARA ADRSW RR WLVLSRSCPTRVHIACRS SS S S+SKVARVS +DSD NDM Sbjct: 43 ERTLLGAAACGNKT---------------------------------RGADDASKALVMAGADPNLGNADGDSPLHLAAEAGHHRVIXXXXXXKKAQAAAPRNVFLETPRQIAAAMGHTLCISELLMGGADRDVDDGKGETXXXXXXXXXXXXXXXXXXXXXXXXXXLTMSYRSPLQAAASR----------------VDATDNRGWTALHCAAYFDRPVHDNGDAVRALLEAGADVNVKNDAHVSDDIFTPLHVAVSRPMASICTIXXXXXXXXXXXXXXXCNQTPLHVACMWGDLSGVELLLRWGADEMLKKNRVDTPADVIGVWGDEDRNDEEIEADNQRIRPVLARAAADRSWHRRDWLVLSRSCPTRVHIACRSSSSSSGSSSKVARVSVDDSDGNDM 396
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 261 bits (668), Expect = 9.070e-78 Identity = 189/453 (41.72%), Postives = 237/453 (52.32%), Query Frame = 2 Query: 14 GWQGWGGDERTLLGAAACGNKSDVMVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLGNVDGDSPLHLAAEAGHHRVIRILLLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELLMGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRSPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIFTPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEIDADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHIACRSRSSC---------SSSNSKVARVSGEDSDENDMKTEDQLMSDWKDLVGRVIGLEIDGLFRLVVGFL 1345 GW+G G RTLLGAAA G +S+ MV+ L AG T VN FG E AL++ GADP + + SPLHLAA AGHHRV+ +LLL + A + LCISELL+G A+ ++ RSPL++AA+RG ++KA LD+ S EVDA D GW ALHYAA D PV D+GDAVR LL AGADV+ K D T L++AVNRR+AS TI +QTPLH+AC + GV+ +D +D+E++ADNQ IRR+LAR PA RSWRRRGWLVLSRSCPTRV IA S + +++KVA+VSGE S +D +T D +M D +DLVGR+I LE DG+FRLVVGFL Sbjct: 67 GWRGCNG--RTLLGAAAFG-RSEKMVRTTLTAGATDDVNVLFGGERE----------------ALMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXX--XXXXXXXALCISELLLG-ANSHLE------------------AVQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCD---TSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 251 bits (641), Expect = 2.140e-73 Identity = 206/453 (45.47%), Postives = 241/453 (53.20%), Query Frame = 2 Query: 8 EPGWQGWGGDERTLLGAAACGNKSDVMVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLGNVDGDSPLHLAAEAGHHRVIRILLLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELLMGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYR--SPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIFTPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEIDADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHIACRSRSSCSSS-----NSKVARVSGEDSDENDMKTEDQLMSDWKDLVGRVIGLEIDGLFRLVVGFL 1345 E GW+G G RTLLGAAA G +S+ M++ LL AG T VN FG ESALHV ARGA+D +AL++AGADP + + G SP XXXXXXXXXXXXXXXXXXXX SPL++AA RG+ +LKA LD+ S EVD A++ GW ALHY A D V D GDAVR LL AGADVNVK D TPLH+AVNR M S TI + TPLHIAC S V+ D +D+E +ADNQ I R+LARAPADRSWRRRGWLVLSRSCPTRVHIA S SS S S ++KVARVSG+ S +D +TEDQ+M D +DLVGR++GLE +GLFRLVVGFL Sbjct: 65 EAGWRGCHG--RTLLGAAALG-RSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKG---TNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 232 bits (592), Expect = 1.960e-62 Identity = 192/466 (41.20%), Postives = 250/466 (53.65%), Query Frame = 2 Query: 5 GEPGWQGWGGDERTLLGAAACGNKSDVMVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLGNVDGDSPLHLAAEAGHHRVIRILLLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELL-MGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRSPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIFTPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEIDADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHIACRSRSSCSSS-NSKVARVSGEDSDENDMKTEDQLMSDWKDLVGRVIGLEIDGLFRLVVGFL*GFKHRRR--SERCPFL 1390 GEPGW+G G RTLLGA A G +S+ MV+ALLEAG T N RF + +SALHV AR DP L G LH+AAE GH RVI +LLL+ D + + PL +GGA DV + S L A G+ ++KAFL+ G +VD D++ +T LH AA DG V LLEAGADVN KTD ++ ++TPLH+AV+RR++SI TI XXXXXXXXXXX N TPLH+AC + N + VK ++ +D+ I+AD++ +RR+LARAPAD+SWRR GWLVLSRS PTRV I R S S+S ++K+ARVSG+DS +D + E+Q+M DW+ L+ R++GLE DGLFRL+VGFL G + S C F+ Sbjct: 64 GEPGWRGCNG--RTLLGATAYG-ESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAAR--------------DPNLPACKGYHALHVAAERGHDRVISLLLLK--GAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGW---------SSLPNAVCCGHATIVKAFLETGI-DVDTTDDQAYTVLHRAA------DMDGCVVHVLLEAGADVNAKTDQNSF--LYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGSSNSCSTKLARVSGKDSSRDD-ELENQMMVDWRVLLDRLVGLEADGLFRLMVGFLCGKEEGNLLPSGGCNFI 491
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 225 bits (574), Expect = 4.640e-61 Identity = 197/480 (41.04%), Postives = 250/480 (52.08%), Query Frame = 2 Query: 62 ACGNKSDVMVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLGNVDGDSP------------------LHLAAEAGHHRVIRILLLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELLMGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRSPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIF-TPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEIDADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHIACRSRSSC------------SSSNSKVARVSGEDSDENDMKTEDQLMSDWKDLVGRVIGLEIDGLFRLVVGFL*GFKHRRRSERCPFLEPAVAV 1408 A G+ S+ MV+ LL AG T N FG ESALHV +ARGAED+ +AL++AGADPTL + D+ + +AA AGHHRVI LLL + A + TPLHLAA+ GR LC+SELL+G A+ ++ S L +AA RG+ +L A LD+ DN + +A D PV D+GDAVRALL GADVN KT TD I +PLH+AV+RR+AS IXXXXXXXXXXXXXX + PLH+AC +V GV+ D +D E +AD+Q I R++A PADRSWRRRGWLVLSRSCPTRV IA S + + +KVARVSGE S +D +TE ++ D ++LVGR++GLE DGL RLV R+R R L P + Sbjct: 56 ADGHWSEKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRALMIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQ--STPLHLAASEGRALCLSELLLG-ANNHLE---------------AVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDK--------DN-----IFFAMSVDGPVHDNGDAVRALLGVGADVNAKT----TDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV-----SLPARQRQPRT--LTPPTPI 493
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 201 bits (510), Expect = 2.030e-54 Identity = 196/449 (43.65%), Postives = 235/449 (52.34%), Query Frame = 2 Query: 2 GGEPGWQGWGGDERTLLGAAACGNKSDVMVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLGNVDGDSPLHLAAEAGHHRVIRILLLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELLMGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRSPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIFTPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEIDADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHIACR-SRSSCSSSNSKVARVSGEDSDENDMKTEDQLMSDWKDLVGRVIGLEIDGLFRLVVGFL 1345 GGE GW+G G RTLLGAAA G KSD +V+ALLEAG VN FG +SALHV ARGAE+ASKAL++AGADP L + G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EVD D++G+TA+H A P+ D+G VR LLEAG VN +T +TPLH AV RR+ASI T ++ TPLH+ACM NV+ V+ D ND+++ AD++ IRR+LARAPADRSWRRRGWLVLSRSCPTRV IA + SR + +S +KVARVSGED ++ + E+Q+ DW LVG ++GLE DGLFRLVVGFL Sbjct: 65 GGERGWRGCNG--RTLLGAAAWG-KSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLR--WTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 198 bits (504), Expect = 3.230e-53 Identity = 196/456 (42.98%), Postives = 239/456 (52.41%), Query Frame = 2 Query: 8 EPGWQGWGGDERTLLGAAACGNKSDVMVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLGNVDGDSPLHLAAEAGHHRVIRILLLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELLMGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRSPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIF--TPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEIDADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHIACRSRS-----SCSSSN---SKVARVSGEDSDENDMKTEDQLMSDWKDLVGRVIGLEIDGLFRLVVGFL 1345 E GW+G D RTLLGAAAC +K+ +++ALL AG VN FG+ ESALH+ ARGAE+ASKAL++AGA+P L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +KAFLD + V+A D+ G+TALH+AA + D GDAVR LL AGADV+ KT TDD PLH+AV R+ S TI ++TPLH AC + +V+ V+ D + +I+AD Q I ++LARAPADRSWRRR WLVLSRSCPTRV IA +RS S SSSN +K+AR SGEDS + +TEDQ+M D + LV R++GLE DGLFRLVVGFL Sbjct: 67 EAGWRGC--DGRTLLGAAAC-SKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTI--VKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKT----TDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.790e-51 Identity = 119/241 (49.38%), Postives = 145/241 (60.17%), Query Frame = 2 Query: 629 EVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIFTPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEIDADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHI--ACRSRSSCSSSNSKVARVSGEDSDENDMKTEDQLMSDWKDLVGRVIGLEIDGLFRLVVGFL 1345 +V+A ++ G ALHYAA PV D GDAVR LL AG DVNV T TD FTPLHVAV+ R+AS TI ++QTPLHIAC +VSGV+ D +D+E DADNQ I R+L RAPADRSWRRRGWLVLSR CPTRV I SR S + +++KVA +SGED+ D +TED++M+D +DLV ++GLE D LFRLVV FL Sbjct: 34 DVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNT---TTDSCFTPLHVAVDGRIASDGTIRALLEGADVDSRAR-HDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSSRGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 176 bits (445), Expect = 2.250e-47 Identity = 135/287 (47.04%), Postives = 159/287 (55.40%), Query Frame = 2 Query: 308 LLRKEAQAADPRNLFLETPLHLAAAMGRTLCISELLMGGADKDVDDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYR-SPLQVAASRGNVAMLKAFLDRGSREVDAADNRGWTALHYAAYDDRPVPDDGDAVRALLEAGADVNVKTDAHATDDIFTPLHVAVNRRMASICTIXXXXXXXXXXXXXXXYNQTPLHIACMWGNVSGVKXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDRNDDEI-DADNQCIRRVLARAPADRSWRRRGWLVLSRSCPTRVHI 1162 +L + D + ETPLHLAA+ G LCISELL XXXXXXXXXXXXXXXXXXX R SPL++AA G+ +LKA LD+ S ++D D GW ALHYAA D PV D+GDAVR LL AGADVN + + D FTPLH+AVN R S T+ +QTPLHIAC +V+GV+ D +D+E +ADNQ IRR+L APADRSWRRRGWLVLSRSCPTRV I Sbjct: 1 MLLLKGSNVDATTGYRETPLHLAASKGHALCISELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACANYGLRTEGTRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVN---ETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRSCPTRVEI 284 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17677.1 >prot_E-siliculosus-1a_M_contig97.17677.1 ID=prot_E-siliculosus-1a_M_contig97.17677.1|Name=mRNA_E-siliculosus-1a_M_contig97.17677.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=421bp MVQALLEAGETKFVNARFGSTLESALHVTVARGAEDASKALVLAGADPTLback to top mRNA from alignment at E-siliculosus-1a_M_contig97:610044..612936- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig97.17677.1 ID=mRNA_E-siliculosus-1a_M_contig97.17677.1|Name=mRNA_E-siliculosus-1a_M_contig97.17677.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2893bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:610044..612936- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:610044..612936- >mRNA_E-siliculosus-1a_M_contig97.17677.1 ID=mRNA_E-siliculosus-1a_M_contig97.17677.1|Name=mRNA_E-siliculosus-1a_M_contig97.17677.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2526bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:610044..612936- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |