mRNA_E-siliculosus-1a_M_contig97.17655.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: A0A6H5JJ53_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJ53_9PHAE) HSP 1 Score: 2107 bits (5459), Expect = 0.000e+0 Identity = 1213/1251 (96.96%), Postives = 1223/1251 (97.76%), Query Frame = 1 Query: 1 MYRHQGESVGTALHAIDRVHTISAAKSQRPGAAAAAAAGRLPGAXXATAISTRRSSHTGPVGVGRKGGSGPISNGGVGSALVSAEAAANGNAAVAASAGTALPRRVSTGQLNNMASTGSNFESMTTIGTPSGSAGGVNSMSRGLARAAGLRSGNDALGRARHSASSNNLAAANGVGGAIAEKREAPTDLRSAIEAGDVLAVGAMVRTMSQEEAEVELVAQDREQGTPLMQAAAGKNVQTYTAVMDAIRSRLGVEALMNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAKYGWTPLHAAARGXXXXMGAVMTALVNYMEADELKEQLSQSHDKDSDLPTPLMFAAASSSLDSRSLNPLLSELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAVSRAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGKRISSFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCAAFTFRMVAFGSDVIQEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFSGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVHLTTCLLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHLLFGGQASKEVDRKSERLKYVITAPGLVMIALFLGLLTIFVGDGSSDGTSGLGKHSSRNSRKDKLQRGGDYDLAGLLKRLANIGVDDLRRQLKNPLKDSQA-PHTSQVLPRDAKMGTTVEHVKQLRDDITLTTANSFRESFRESGKMADDRAARLEARMSSLEIHLAKIAALLENGNTYNAGGGXXXXXXXXXXITTARATSSSNNTSGYRSGGSQLGASQHRGG 3750 MYRHQ ESVGTALHAIDRV TISAAKSQRPGAAAAAAAGRL XX I +RRSSHTG VGVGRKGGSGPISNGGVGSA VSAEAAANGNAAVAA AGTAL RRVSTGQLNNMASTGSNFESMTTIGTPSGS GGVNS+SRGLARAAGLRSGND LGRARHSASSNNLA +NGVGGAIA+KRE PTDLRSAIEAGDVLAVG+MVRTMSQEEAEVELVAQDREQGTPLMQAAAGKNVQTYTAVMDAIRSRLGVEALMNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAKYGWTPLHAAARGXXXXMGAVMTALVNYMEADELKEQLSQSHDKDSDLPTPLMFAAASSSLDSRSLNPLLSELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCL+AYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAVSRAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGKRISSFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCAAFTFRMVAFGSDVI+EEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGG+APSLDXXXXXXXXXXXXXXX EGVLWFD GGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEF+GVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQ WNRVVEHDVLPSPLNLVHL TC+LLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHLLFGGQASKEVDRKSERLKYVITAPGLVMIALFLGLLTIFVGDGSSDGTSGLGKHSSRN RKDKLQRGGDYDLAGLLKRLANIGVDDLRRQLKNPLKDSQA PHTSQVLPRDAKMGTTVEHVKQLRDDITLTTANSFRESFRESGKMADDRAARLEARMSSLEIHLAKIAALLENGNTYNAGGGXXXXXX ITTARATSSSNNTSGYRSGGSQLGASQHRGG Sbjct: 223 MYRHQAESVGTALHAIDRVQTISAAKSQRPGAAAAAAAGRLXXXXXXXXIGSRRSSHTGSVGVGRKGGSGPISNGGVGSARVSAEAAANGNAAVAAVAGTALVRRVSTGQLNNMASTGSNFESMTTIGTPSGSGGGVNSISRGLARAAGLRSGNDGLGRARHSASSNNLAVSNGVGGAIADKRELPTDLRSAIEAGDVLAVGSMVRTMSQEEAEVELVAQDREQGTPLMQAAAGKNVQTYTAVMDAIRSRLGVEALMNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAKYGWTPLHAAARGXXXXMGAVMTALVNYMEADELKEQLSQSHDKDSDLPTPLMFAAASSSLDSRSLNPLLSELLGCMCDIDEARRQRTAVDYAAAYGRLDTLSCLIAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAVSRAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGKRISSFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCAAFTFRMVAFGSDVIEEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGSAPSLDXXXXXXXXXXXXXXXDTEGVLWFDRGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFAGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQHWNRVVEHDVLPSPLNLVHLATCVLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHLLFGGQASKEVDRKSERLKYVITAPGLVMIALFLGLLTIFVGDGSSDGTSGLGKHSSRNCRKDKLQRGGDYDLAGLLKRLANIGVDDLRRQLKNPLKDSQARPHTSQVLPRDAKMGTTVEHVKQLRDDITLTTANSFRESFRESGKMADDRAARLEARMSSLEIHLAKIAALLENGNTYNAGGGXXXXXX----ITTARATSSSNNTSGYRSGGSQLGASQHRGG 1469
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 201 bits (512), Expect = 9.120e-49 Identity = 168/527 (31.88%), Postives = 247/527 (46.87%), Query Frame = 1 Query: 1537 GFEAVQWLLEPEMGGKRISSFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPD----------MHNRDTRRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCF-VVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQS-ELWNVVEAVLLGLVCAAFTFRMVAF---------------GSDVIQE-EAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFSGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVH-LTTCLLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAA 3030 G VQ +LEPE+ G + GPLA+A+++R ++F T +V+ Y+ KFS GLP F W+ M N D + ++ + G PD+ + +PGLQF G+A + AF+ VPA+R+A DV+ Y ++ +F VV L +I A +V + VY++G + ++ E + LR WNVVEA L + AF FRM A+ GS + E +LAQ F A +AP +VLFL Q+ +LG ++ F ++ ++ RFG ++ VI LGFA+A +A+FG + SL DGG DI+E + T+ S LT+F +M G+F F F G AG LMV FL VM I LLNLLIA L AH+ + A + + I+ Q+ R + D LPSPLN+ L +C+L + K + + R +FWLV GP+ A Sbjct: 527 GTTLVQEMLEPELAGLQPRDCAGPLAQAMQSRHVDFIYTPLVVDYLRLKFSAGLPNPFRETDWRREHGRVDRNLARFMVNEDESQLMVYILQGGCPDSP---------------------SWTYLPGLQFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVHEVQEAGSLRVHLFNPWNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASLP-----------------------DGG---------------------DIAE-----YDTYYSSILTLFSSMLGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELISCVLWRH---KERAKEVFARA---VFWLVSGPIAIA 977
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 198 bits (504), Expect = 8.550e-48 Identity = 235/867 (27.10%), Postives = 371/867 (42.79%), Query Frame = 1 Query: 1216 LDTLSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAVSRAADRDAK-HRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGKRISSFTGPLARALETRR-LEFFSTNIVLA-YVSRKFSRGLPGV------------------------FSGASWKMPDMHNRDT-------RRFVLGLPYGAAPDNVVGAVRM---RLCVPFELIQGS---ALRRTSL----IPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCAAFTFRMVAFGSDVIQEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDF-NEFSGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVHLTTCLLLKPCVPKSKY------PLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWS--IWHLLFGGQASKE---VDRKSERLKYVIT-------APGLVMIALFLGLLT--------IFVGDGSSDGTSGLGKHSSRNSRKDKLQRGGDYDLAGLLKRLANIGVDDLRRQLKNPLKDSQAPHTSQVLPRDAKMGTTVEHVKQLRDDIT---LTTANSFRESFRESGKMADDRAARLEARMSSLEIHLAKIAALL 3594 + LSCL+ Y + D LS + + A C + + + NP +P + A +++A + R+ LL +Q VD L+ E+L++LP + GF G + EPE+ + GPL AL+ R+ ++ F T +L ++SR+F+ GLPG+ SG + D R R +L L + + R L P L+QG+ L T++ +PG QF GL PD +Y VPA+RM D+ YL ML+ F VV + E AF Y+L ++ E E R L ++ WN+++ + LGLV R D A + A++APL FSR+LF AQ+ G M+Q++F M E+V+FGVVI V++LGFAM+ ALFG TF + LT+F+AM G+ DF F G +Y S L V +L V+ ++LLNLLIA L+ +HS+V +A +F ++ +I++ + VV+ +LP P NLV L L P + + + +G FWL +GP+ AA +W +S ++ +WH F +A + S ++Y+I AP L ++A +L +V D S N D L+ +AG DL+ L++P+ D + V P + + TTVE++KQLR+ + LT ++ +S + + D ++ R++ +E +LA I A L Sbjct: 531 IGALSCLLQYPT-MFDTADLIQLSRERS--AEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDG-------GMTGCSAVFEPELSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPLTPGEAAFAFYILAGIITEGQEMRRDFGLYA-ADHWNILDLLGLGLVTGGLIVRCA--DGDNSWGRALY------ALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDV--------------------------------------------------------------DTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSL---PVMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSKAQARRGALSVGSLLVRYLIVFFWCVLGAP-LYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPKSVN---DLLEGNSGGLVAG-----------DLQMYLEDPIGDPE------VRPDERRKQTTVENIKQLRNRLEKTILTHLDAKLDSIEQDRASSTDG---VQVRLARMEENLAGIRAQL 1289
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: A0A6H5KIV5_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIV5_9PHAE) HSP 1 Score: 187 bits (475), Expect = 1.050e-44 Identity = 233/850 (27.41%), Postives = 362/850 (42.59%), Query Frame = 1 Query: 1111 RSLNPLLSELLG-CMCDIDEARRQRTAVDYAAAYGRLDTLSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAVSRAADRDAK-HRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEM-----------------GGKRISSFTGPLARALETR-RLEFFSTN-IVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPYGAAPDNVVGAVRMRLCVPFELIQGS--ALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQSELWNVVEAVLLGLVCAAFTFRMVAFGSDVIQEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQ------------------ILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFSGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVH---LTTCLLLKPCVPKSK-YPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHLLFGGQASKEVDRKSERLKYVITAPGLVMIALFL---------GLLTIFVGDG---SSDGTSGLGKHSSRNSRKDKLQRGGDYDLAGLLKRLAN-------IGVDDLRRQLKNPLKDSQAPHTSQVLPRDAKMG-TTVEHVKQLRDDIT 3465 R++NP++ + L M ++ + Q + + + SCL+ +G + + V+ L G A G A +C + +A NPL+ + ++ AA + RQ LR+Q++V++LV E+ ++LP + GF + + G G +A + PE GG R+ S GPL AL+ R +LE F T +VL Y++R F+RGLPG+ + + + + + A G V L E+++GS L +L G QF + +RP Y VPAVRMA D++ YL ML LF V + EV F+VY+LG ++ E+ E R+ + WN ++ L AF R+ + + + A + A APL R LF AQ G M++ I+F + E++RF ++ V ++GFAM+ FALF + E L+ DD +D E PS E L FN G G L+ A+ VMGI+LLNLLIA L+ A+ +V+ + TRT +++ + + V+ D+LP PLNL+ T +L + K+ + G LFW V G +W +S P ++ +F + S R S + V G+ M L L G L + DG S+DG + G R+ + + D + L+R + V LR L NP+KD V+ RD + TTVEHVK LRD++T Sbjct: 124 RAVNPIIDDCLPLAMSEVLMSNSQVPGNEAVSVF------SCLIKHGAAPTPRQVS--LVGRKA-GFEAARKCFLDAVCSAVNPLLVGMRLSLLLADAAGMGNEGQRQVALRLQNEVEDLVLEVFERLPQTVDGFREGDVG-GSGMDACSVVFAPEKIRPRDETIPSHLFQDGTGGTRVDS--GPLEMALQARHQLELFCTQPLVLDYLNRAFTRGLPGLDASETGAQEADQFKLLMQRNASVQVNAGDGESSGEVSREL---LEVLEGSHSVLGSLTLSAGKQFILAQVVARPAFSYSVPAVRMAVDLLVYLLMLALFAKDVLWYKEGTVEVGEVVFFVYVLGAILVEITELWDGRE-EYMKDHWNALDVAALAFCGGAFLVRV--YDPESLWGRALYCA------GAPLLLFRTLFFAQFMPAQGPMIEVKEARGYPSFLRDLGLSLIIFSLAGELLRFCTILLVTMMGFAMSFFALFRHSCTVGSFQTYWSTSIALLRAMLGETKLY--------------DDFTVAAECCYDAVE---PSDEFHCEDFLMECCHSVESEHFN-------GLVGKALLAAYNVVMGIILLNLLIAVLSEAYVDVKENIDTESKVTRTLVIRHYMKAVDQDMLPPPLNLIQHAVSTLAMLFGSLMGKTGVFRKAEFYSGLVLFWFVSGLFAVLAGSILWAISWPRGVF--MFFLRRSSHSGRVSGSAQLVALFCGVAMPLLMLYKWLWTSTCGALWRHLVDGGAWSNDGGASAGYDEIRSDGSRRPRPHDDGIIGKTLERYGGTAGQGGALNVHQLREFLANPMKDP-------VVQRDEETRETTVEHVKLLRDNLT 916
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 183 bits (464), Expect = 6.750e-43 Identity = 155/516 (30.04%), Postives = 223/516 (43.22%), Query Frame = 1 Query: 1834 PFELIQGSALRR--------TSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGE-----------------------------ARYVRKLRGQS----------------------ELWNVVEAVLLGLVCAAFTFRMVA---FGSDVIQEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFSGV-----------RYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVHLTTCLLLKPCVP-----------------KSKYPLLMMRIGC---------FLFWLVMGPLGAALAIAMWFVSIPWSIWHLL 3084 P E +G + RR T+++P LQF+ GL +P FY VPAVR A + + YL ML LFC VKL+ +IP EVAFYV+M G + E+ E A++ R + + WN+++ + L V AF FR++ FG + FF+AQ F A +APL F+R+L L+QID LG M+QI++RML + +RFGV I V++ GFA+A A+FG S D + LD S+ +F + LT+F+A G+F F +F V R AG L+VA+L V+ +V+LNLLIA L+ AH EV + + +FH RT+++ Q R V H +P P NLV L LL K + + G LF MG + L +W +S+PW W ++ Sbjct: 948 PEEQPRGRSTRRSDRNKLPHTTVLPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCACVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYEQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFIFRLLGIREFGGPADPGDYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFG-----------------------------------------SCDAGSDLDE-----------SYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQLVVGFLLDGVSELAWWAVRGADRCGLRQHKESFAPITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIV 1411
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: A0A6H5KCQ6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCQ6_9PHAE) HSP 1 Score: 178 bits (451), Expect = 4.480e-42 Identity = 201/698 (28.80%), Postives = 310/698 (44.41%), Query Frame = 1 Query: 1162 DEARRQRTAVDYAAAY-GRLDTLSCLMAYGCEISDQTVTTLL------SGDLAV---GAAAFNRCIWKGITTAR---NPLIPAHNVLRAVSRAADRDAKH-------RQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGK-------------RISSFTGPLARALETRRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPY-----GAAPDNVVGAVRMRLCVPFELIQGSALRR-------TSLIPG---LQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCF-VVKLESPTKIPAKEVAFYVYMLGNM-------VNELGEARYVRKLRGQSELWNVVEAVLLGLVCAAFTFRMVAF---------------GSDVIQE-EAFFLAQLFFAMAAPLFFSRVLFLAQ--IDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFSGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVH-LTTCLLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAA 3030 DE+ Q TA+D AA +L + CL+A G + + V LL G +AV G AA C + + NPLIP N+ A++ A + +H R LL+M++D++ LV +L+ LP + GF D + G A +P++G K ++S+F A+E + + + ++R + G A+ + D+ + ++ G P + G + E + A++ T L+ L+F G+A + AF+ VPA+R+A DV+ Y ++ +F VV L +I A +V + VY++G + V+E+ EA +R WNVVEA L + AF FRM A+ GS + E +LAQ F A +AP +VLFL Q + +LG ++ F ++ ++ RFG ++ VI LGFA+A +A+FG + SL DGG DI+E + T+ S LT+F +MFG+F F F G AG LMV FL VM I LLNLLIA L AH+ + A + + I+ Q+ R + D LPSPLN+ L +C+L + K + + R +FWLV GP+ A Sbjct: 16 DESEAQLTALDLAARPPAKLGVIKCLLACGAIPTARVVQRLLRTCSEDGGAVAVSGSGLAAVRECFLGAMIASEWAVNPLIPGLNLYTAINAARRQVGRHVKACGAMRNNLLQMKNDINALVLSVLRHLPDTVEGF-DRFSTPAAGNAAGTGAAKPKLGKKTNPTLTPAKLPVSKVSTFEEDHDGAVEEGNATAATKLNLTSTIARGVTAASSGRLEAAAADLDDVPASEVGTSLVQEMLEPELAGLQPRDCAGPLAQARRACGETSKSFAMQSRHVDFIYTPLVVDYLRLKFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVWMVVHEVQEAGSLRVHLFNP--WNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQARVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFGSMSASLP-----------------------DGG---------------------DIAE-----YDTYYSSILTLFSSMFGNFSFEVFKGAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELISCVLWRH---KERAKEVFARA---VFWLVSGPIAIA 655
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 177 bits (450), Expect = 1.760e-41 Identity = 182/633 (28.75%), Postives = 284/633 (44.87%), Query Frame = 1 Query: 1225 LSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAV-----SRAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGKRIS-SFTGPLARALET--RRLEFFSTNIVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPYGAA--PDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQS-ELWNVVEAVLLGLVCAAFTFRMVAFGSDVIQEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFD-FNEFSGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVHLTT---CLLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALA-IAMWFVSIPWSIW 3075 LS L+ +G + + L A+ + C+++ + +A+N IP+ N+ A S A++RD R+ L R+Q DVD ++ E L +LP + G + G A LLEPE + GPLARAL R + F +T + + ++ KF+RGLP + G S + + D R G A P +++G R V L + L + PG F G+ + P+++Y+VP +RMA D + + L F V L + E+AF +Y++ ++ E E + L G + W + L + AAF R A SD + A+ +PL + R+L+ AQ+ + G +Q+L+ M E+ +F VV+GV++LGFAM+ FALF G RG L L F+AM G+ F++F G ++ A L+V++L VM I+LLNLLIA L+ AH +V + R +W VV D LP+P NL L C ++ + YP+ +G +FWLV+GP GA L I +W VS P +++ Sbjct: 425 LSMLLQHGTKPHPADLVILCR---AIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERD---RRVLARLQHDVDSILTETLDRLPQTVCGLSG-------GMAACTALLEPEEADDSSTYGERGPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDGHSVLILEKSRLDVREEAKGHESLTALCPGSILGGFLPR--VGKLLWEDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLFEKGSLTIAEMAFAIYVVAAIMLEATEMW--KDLAGYLLDRWKAPHFLALVVALAAFLAR--AIDSDSSWGRGLY------AVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVK----------------------------GETLRGAL--------------------------------LDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVLIRVSRARVYTHYRW--VVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARRGVGRIVFWLVLGP-GAILGGIFVWLVSTPKALF 969
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 175 bits (444), Expect = 7.390e-41 Identity = 181/636 (28.46%), Postives = 289/636 (45.44%), Query Frame = 1 Query: 1225 LSCLMAYGCEISDQTVTTLLSGDLAVGAAAFNRCIWKGITTARNPLIPAHNVLRAV-----SRAADRDAKHRQFLLRMQSDVDELVQEMLQQLPPNMAGFADNYMDTGQGFEAVQWLLEPEMGGKRIS-SFTGPLARALE-TRRLEFFSTN-IVLAYVSRKFSRGLPGVFSGASWKMPDMHNRDTRRFVLGLPYGAA--PDNVVGAVRMRLCVPFELIQGSALRRTSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGEARYVRKLRGQS-ELWNVVEAVLLGLVCAAFTFRMVAFGSDVIQEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFD-FNEFSGVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVHLTT---CLLLKPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALA-IAMWFVSIP---WSIW 3075 LS L+ +G + + L A+ + C+++ + +A+N IP+ N+ A S A++RD R+ L R+Q DVD ++ E L +LP ++ G + G A LLEPE+ + GPLARAL T R+ F+T + + ++ KF+RGLP + G S + + D R G A P +++G R V L L + PG F G+ + P+++Y+VP +RMA + + + + L F V L ++ EVAF +Y++ ++ E E + L G + W + L + AAF R + S + +A+ +PL + R+L+ AQ+ + G +Q+L+ M E+ +F VV+GV++LGFAM+ FALF G RG L L F+AM G+ F++F G ++ A L+V++L VM I+LLNLLIA L+ AH +V + R +W VV D LP+P NL L C ++ + YP+ +G +FWL++GP GA L + +W VS P ++IW Sbjct: 334 LSMLLQHGTKPHPTDLVILCR---AIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERD---RRVLARLQHDVDSILTETLNRLPQSVCGLSG-------GMAACTALLEPEVADDSSTYGERGPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPALKDGHSVLILEKSRLDIREEAKGHESLTALCPGSILGGFLPR--VGKLLWDDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVLLFEKGQLTIAEVAFAIYVVAAIMLEATEMW--KDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSS--------WGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVK----------------------------GETIRGAL--------------------------------LDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVLIRVSRARVYTHYRW--VVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARRGVGRIVFWLLLGP-GAILGGVFVWLVSTPKALFAIW 881
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 167 bits (422), Expect = 6.720e-38 Identity = 141/489 (28.83%), Postives = 211/489 (43.15%), Query Frame = 1 Query: 1870 TSLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGE-------------ARYVRKLRGQS-----------------------------------ELWNVVEAVLLGLVCAAFTFRMVAFGSDVIQEEAFFL--AQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFS------------GVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVHLTTCLLL-----------------------KPCVPKSKYPLLMMRIGCFLFWLVMGPLGAALAIAMWFVSIPWSIWHL 3081 ++++PGLQF+ G+ +P+ FY+VP +R A ++ +YL ML+LFCF V L+ IP EV FYV+ G + E+ E R V K G + + WN ++ +G + AF FRM+A ++ FFL AQ F+A++APL FSR+L L+QID LG M Q+++RM+ +RF I +++L FA+A A+F G + T DD+ L +F TF +S +T+F G DF F G R +AG+ L+V ++ M +VLLNLLIA L+ H +V + A+ +FH R +++ Q RVV P PLNL+ L +LL KP ++ L + F G L+ +W VS+PW W L Sbjct: 982 STMLPGLQFSLAGIQGKPETFYKVPVIRFAFEIFSYLVMLVLFCFSVLLKEHDSIPWGEVTFYVFAAGLLWREILEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIAL------DDKFFLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTC-----------------------------GEYSEPQCTLDDDDAFPL-----------RDAFGTFGDSFVTVFTYALGGPDFEAFQLAGSDCRCDLPEGAR--NAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFHHARARLIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTEVWRVGVWVTRGRSQARMLKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSTILWIVSVPWVAWCL 1422
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 157 bits (396), Expect = 5.900e-35 Identity = 127/401 (31.67%), Postives = 185/401 (46.13%), Query Frame = 1 Query: 1873 SLIPGLQFNCVGLASRPDAFYEVPAVRMACDVVTYLSMLILFCFVVKLESPTKIPAKEVAFYVYMLGNMVNELGE------ARYVRKLRGQS---------------------------------ELWNVVEAVLLGLVCAAFTFRMVA-FGSDVIQEEAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQILFRMLKEVVRFGVVIGVILLGFAMAMFALFGGTAPSLDXXXXXXXXXXXXXXXXXEGVLWFDGGGARGLLTSSGDDSATLDPMSFDISEIYLPSFSTFPESALTMFRAMFGDFDFNEFS------------GVRYGSAGVGLMVAFLTVMGIVLLNLLIAFLTGAHSEVRSQAKAKFHFTRTQIVQQWNRVVEHDVLPSPLNLVHL 2919 +++PGLQF+ G+ +P+ F++VP +R ++ +YL ML+LFC V L+ P IP EV FY++ G + E+ E R R G + WN ++ + + AF FRM+A F S E F AQ F+A++APL FSR+L L+QID LG M Q+++RM+ ++RF I +++L FA+A A+F G + T DD+ L +F TF +S LT+F + G +F+ F G R SAG+ +MV + M +VLLNLLIA L+ AH EV A+ +FH R ++V Q R V H P PLNLV L Sbjct: 857 TILPGLQFSLAGILGKPETFFKVPVIRFVYEIFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRTSGGPRTEEGGRVEPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDTSTICCIFVAFIFRMIARFDS----EFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTC-----------------------------GEHSEPQCTLDDDDAFPL-----------RDAFGTFGDSLLTVFSSALGGPEFDLFDDAGSDCRCNLPRGAR--SAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSARSVAHRRPPPPLNLVKL 1211 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 19 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17655.1 >prot_E-siliculosus-1a_M_contig97.17655.1 ID=prot_E-siliculosus-1a_M_contig97.17655.1|Name=mRNA_E-siliculosus-1a_M_contig97.17655.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1255bp MYRHQGESVGTALHAIDRVHTISAAKSQRPGAAAAAAAGRLPGASAATAIback to top mRNA from alignment at E-siliculosus-1a_M_contig97:292629..306369- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig97.17655.1 ID=mRNA_E-siliculosus-1a_M_contig97.17655.1|Name=mRNA_E-siliculosus-1a_M_contig97.17655.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=13741bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:292629..306369- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:292629..306369- >mRNA_E-siliculosus-1a_M_contig97.17655.1 ID=mRNA_E-siliculosus-1a_M_contig97.17655.1|Name=mRNA_E-siliculosus-1a_M_contig97.17655.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=7530bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:292629..306369- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |