mRNA_E-siliculosus-1a_M_contig97.17646.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17646.1 vs. uniprot
Match: D7FTP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP5_ECTSI) HSP 1 Score: 103 bits (257), Expect = 2.040e-26 Identity = 56/93 (60.22%), Postives = 60/93 (64.52%), Query Frame = 3 Query: 57 APSAGMDNHRTFVGRFYRWCEDCKEASARESDFYEYNSGFQP*TVADQR*RCRPTTPP----RAFVVRCASLVTRAGNRGPGDHIPRRGQVVR 323
A SAGMD+HRTFVGRFYRWCEDCKEASARESDFYEY SG R P PP + + + GN GPGDHIPRRGQVVR
Sbjct: 33 ATSAGMDSHRTFVGRFYRWCEDCKEASARESDFYEY-SGIPTLNGG----RPTPALPPHYTAKGLCRQMCLPCDKGGNGGPGDHIPRRGQVVR 120 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17646.1 >prot_E-siliculosus-1a_M_contig97.17646.1 ID=prot_E-siliculosus-1a_M_contig97.17646.1|Name=mRNA_E-siliculosus-1a_M_contig97.17646.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=72bp MVRRLQGGERPRIRLLRVQQRIPTLNGGRPTLALPPHYTAQGLCRQMCLPback to top mRNA from alignment at E-siliculosus-1a_M_contig97:198931..199255- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig97.17646.1 ID=mRNA_E-siliculosus-1a_M_contig97.17646.1|Name=mRNA_E-siliculosus-1a_M_contig97.17646.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=325bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:198931..199255- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:198931..199255- >mRNA_E-siliculosus-1a_M_contig97.17646.1 ID=mRNA_E-siliculosus-1a_M_contig97.17646.1|Name=mRNA_E-siliculosus-1a_M_contig97.17646.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=432bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:198931..199255- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |