mRNA_E-siliculosus-1a_M_contig97.17634.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: D7FU01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU01_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.160e-65 Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSELASFHAGIKRTSISAPGAH-VRWVRVDICRRFRERSNPEE 297
MSDEEPWEPLTM DYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSE+A FHAGI+RTSISAPGA VRWVRVDICRRFRERSNPEE
Sbjct: 1 MSDEEPWEPLTMADYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSEVAGFHAGIQRTSISAPGARDVRWVRVDICRRFRERSNPEE 100
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI) HSP 1 Score: 115 bits (289), Expect = 1.980e-28 Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIM 165
MSDEEPWEPLT VDY+MLG+VG FQAFALGVCIHL RWRKWPPYVTKNVDIVIIM
Sbjct: 1 MSDEEPWEPLTFVDYVMLGMVGAFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIM 55
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: D7FU03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU03_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.040e-27 Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIM 165
MSDEE WEPLTMVDY MLG VGT QAFALGVC+HL WR WPPYVTKNVDIVI+M
Sbjct: 1 MSDEEVWEPLTMVDYTMLGFVGTVQAFALGVCVHLLIWRNWPPYVTKNVDIVIVM 55
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI) HSP 1 Score: 113 bits (282), Expect = 1.470e-27 Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIM 165
MSDEE WEPLTMVDYLMLGIVGTFQA ALGVC+HLF WR WPPYVTKNVDIVIIM
Sbjct: 1 MSDEELWEPLTMVDYLMLGIVGTFQALALGVCVHLFLWRNWPPYVTKNVDIVIIM 55
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI) HSP 1 Score: 112 bits (279), Expect = 6.750e-27 Identity = 51/68 (75.00%), Postives = 54/68 (79.41%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSELASFHAGI 204
M D+EPWEPL VDYLMLGIV TFQAFALGVCIHL RWRKWPPYVTKNVDIVIIM +F A +
Sbjct: 1 MPDKEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTFAAAV 68
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.340e-25 Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIM 165
MSDEE WEPLTMVDY+MLG VGT QAFALGVC+HL WR WPPYVTKNVDIVI+M
Sbjct: 1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLLSWRHWPPYVTKNVDIVIVM 55
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: A0A6H5K025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K025_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.180e-24 Identity = 45/56 (80.36%), Postives = 48/56 (85.71%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMV 168
MSD+E WEPL MVDY+MLG VGT Q FALGVCIHL WR WPPYVTKNVDIVI+MV
Sbjct: 1 MSDKEVWEPLAMVDYIMLGFVGTVQTFALGVCIHLLSWRHWPPYVTKNVDIVIVMV 56
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: D7FIS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS2_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 1.980e-23 Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVII 162
MSD +PWEPL M+D+ +LG+V TFQ ALGVC HL +WRKWPPY+TKNVD+VII
Sbjct: 1 MSDNQPWEPLGMLDFFVLGMVSTFQLVALGVCAHLVKWRKWPPYLTKNVDVVII 54
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: D7FIR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR8_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 3.010e-18 Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 4 SDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVIIMVECSELASFHAGIKRTSISAPGAHVRWVRVDI 261
++ E WEPL+ D+ +LG V TFQA AL VC HL RWRKWPPYVTKNVD+VII ++F + S+ ++R DI
Sbjct: 3 AEGEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLRWRKWPPYVTKNVDVVII-------STFSGVLWNVSMIISSGYIRREAGDI 81
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 7.750e-18 Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 1 MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDIVII 162
M+++E WEPL+ D+ +LG V TFQ AL VC HL RWRKWPPYVTKNVD+VII
Sbjct: 1 MAEDEVWEPLSTPDFWVLGFVATFQTVALLVCAHLLRWRKWPPYVTKNVDVVII 54 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig97.17634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig97.17634.1 >prot_E-siliculosus-1a_M_contig97.17634.1 ID=prot_E-siliculosus-1a_M_contig97.17634.1|Name=mRNA_E-siliculosus-1a_M_contig97.17634.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=100bp MSDEEPWEPLTMVDYLMLGIVGTFQAFALGVCIHLFRWRKWPPYVTKNVDback to top mRNA from alignment at E-siliculosus-1a_M_contig97:40166..40932+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig97.17634.1 ID=mRNA_E-siliculosus-1a_M_contig97.17634.1|Name=mRNA_E-siliculosus-1a_M_contig97.17634.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=767bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:40166..40932+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig97:40166..40932+ >mRNA_E-siliculosus-1a_M_contig97.17634.1 ID=mRNA_E-siliculosus-1a_M_contig97.17634.1|Name=mRNA_E-siliculosus-1a_M_contig97.17634.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=600bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig97:40166..40932+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |