mRNA_E-siliculosus-1a_M_contig966.17629.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: D1J707_ECTSI (Uncharacterized protein ycf35 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J707_ECTSI) HSP 1 Score: 259 bits (663), Expect = 1.380e-87 Identity = 131/134 (97.76%), Postives = 133/134 (99.25%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIKR 402 MSHYTSIKTKYTNPTILKKVITKLGHPYVE+NFNKNIEVPLNSSKTLKSNIYSNLNQNYLAF LNNLSYSIITDSQSWTQ+ERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIKR Sbjct: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVEHNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFVLNNLSYSIITDSQSWTQKERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIKR 134
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A7T8G5F1_SCYLO (Uncharacterized protein ycf35 n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5F1_SCYLO) HSP 1 Score: 236 bits (601), Expect = 3.940e-78 Identity = 117/134 (87.31%), Postives = 125/134 (93.28%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIKR 402 MSHYTSIKTKYTNP ILKKVI KLGHPYVE+N NK IEVP+N SK+LKS+IY++LNQNYLAFGL NLSY IITDSQSWTQ+ERINIFLKKIELNYGYSETITQALDLGFIRSKV TTN+ NNRFIFQRYVEIKR Sbjct: 1 MSHYTSIKTKYTNPNILKKVINKLGHPYVEHNLNKTIEVPINFSKSLKSSIYNDLNQNYLAFGLRNLSYDIITDSQSWTQKERINIFLKKIELNYGYSETITQALDLGFIRSKVLTTNRNNNRFIFQRYVEIKR 134
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A1I9LVW8_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVW8_9PHAE) HSP 1 Score: 233 bits (593), Expect = 6.540e-77 Identity = 115/133 (86.47%), Postives = 124/133 (93.23%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIK 399 MSHYTSIKTKYTNP ILKKVI KLGHPYVE NFNK+IEVP+NSSK LK IYSN NQNYLAFG+NNLSY+IITDSQSWTQ+E+INIFLKKIELNYGYS+TI QAL+LGFIRSKV TTNKKNN+FIFQRYVEIK Sbjct: 1 MSHYTSIKTKYTNPNILKKVINKLGHPYVERNFNKHIEVPINSSKILKLGIYSNSNQNYLAFGVNNLSYAIITDSQSWTQKEKINIFLKKIELNYGYSKTIMQALNLGFIRSKVLTTNKKNNKFIFQRYVEIK 133
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A6B7EZ45_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EZ45_9PHAE) HSP 1 Score: 223 bits (568), Expect = 4.240e-73 Identity = 109/134 (81.34%), Postives = 120/134 (89.55%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIKR 402 MSHYTSIKTKYTNP ILKKVI KLGHPYVE+NFNKNIE+P++ SKTLKS IY N N NYL+F L +LSY+IITDSQSWTQ+E+ N+FLKKIELNYGYSETI QAL+LGFIRSKV TTNK NNRFIFQRYVE KR Sbjct: 1 MSHYTSIKTKYTNPVILKKVINKLGHPYVEHNFNKNIEIPMHFSKTLKSKIYENSNDNYLSFELRDLSYNIITDSQSWTQKEKTNVFLKKIELNYGYSETIAQALELGFIRSKVLTTNKNNNRFIFQRYVETKR 134
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A8F0F8T3_9PHAE (Uncharacterized protein ycf35 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F8T3_9PHAE) HSP 1 Score: 206 bits (525), Expect = 1.520e-66 Identity = 102/134 (76.12%), Postives = 118/134 (88.06%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIKR 402 MSHYTSIKTKYTN +LKKVI KLG+PY+E+ +NK+IEVPL SK LKS+IY+N QNYL+F +NLSYSIITDSQSWTQ+E IN FLKK+ELNYGYSETITQAL+LGF+RSKV TTN KNNRF+FQR VE+KR Sbjct: 1 MSHYTSIKTKYTNSNVLKKVINKLGYPYIEHKYNKDIEVPLVFSKNLKSSIYNNSCQNYLSFKFDNLSYSIITDSQSWTQKEVINRFLKKLELNYGYSETITQALELGFVRSKVLTTNNKNNRFVFQRCVEVKR 134
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A0R6M4I4_UNDPI (Uncharacterized protein ycf35 n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6M4I4_UNDPI) HSP 1 Score: 198 bits (504), Expect = 2.330e-63 Identity = 100/134 (74.63%), Postives = 114/134 (85.07%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIKR 402 MSHYTSIKTKYTN +LKKVI KLG+PY+E+N N NIEVP+ K LKS+IY N +QNYLAF NNLSY IITDSQSWTQ+E I+ FLKK+ELNYGYSETI QALDLGF+RSKV TTN KNNRF+FQR +E+KR Sbjct: 1 MSHYTSIKTKYTNSNVLKKVINKLGYPYIEHN-NNNIEVPVIFPKNLKSSIYENSDQNYLAFKSNNLSYDIITDSQSWTQKEIISNFLKKLELNYGYSETIHQALDLGFVRSKVLTTNNKNNRFVFQRCIEVKR 133
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A8F0JYK6_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYK6_9PHAE) HSP 1 Score: 192 bits (488), Expect = 6.580e-61 Identity = 93/133 (69.92%), Postives = 110/133 (82.71%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIK 399 MSHYTSIKTKYTN +LK+ I KLG+P+VE++FNKNIEV LN S LKS+IY N NYL +LSY+IITD QSWT++E INIFLKK+ELNYGY+ETI QA+DLGF+RSKV T N KNNRF+FQRYVE+K Sbjct: 1 MSHYTSIKTKYTNSRVLKEAINKLGYPFVEHHFNKNIEVSLNFSGNLKSSIYDNSQNNYLGLKKKDLSYNIITDHQSWTEKEVINIFLKKLELNYGYAETINQAIDLGFVRSKVLTANNKNNRFVFQRYVEVK 133
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A8F0JZI3_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZI3_9PHAE) HSP 1 Score: 190 bits (482), Expect = 5.400e-60 Identity = 96/133 (72.18%), Postives = 107/133 (80.45%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIK 399 MSHYTSIKTKYTN +LKKVI KLG+PY E NF K IEV + K LKS+IY + +QNYLAF LSY ++TDSQSWTQ+E IN FLKK+ELNYGY ETI QALDLGFIRSKV TTN KNNRFIFQR VE+K Sbjct: 1 MSHYTSIKTKYTNLNVLKKVINKLGYPYTEQNFAKKIEVSIIHPKDLKSSIYDSYSQNYLAFQSTKLSYDMVTDSQSWTQKEIINTFLKKLELNYGYLETINQALDLGFIRSKVITTNNKNNRFIFQRCVEVK 133
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A125QZS2_9PHAE (Uncharacterized protein ycf35 n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A125QZS2_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.270e-58 Identity = 92/133 (69.17%), Postives = 111/133 (83.46%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIK 399 MSHYTSIKTKYTN ILKKVI KLG+PY+E+ ++ IEVP+ +S LKS+IY +QNYLAF N LSY IITDS+SWTQ+E I++FLKK+ELNYGY+ETI QALDLGF+RS+V NKK+NRFIFQR+VE K Sbjct: 1 MSHYTSIKTKYTNSKILKKVINKLGYPYIEHKLHETIEVPIVNSDYLKSSIYDTTHQNYLAFKYNKLSYDIITDSRSWTQKEIISLFLKKLELNYGYAETIYQALDLGFVRSRVIKMNKKHNRFIFQRFVETK 133
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Match: A0A2R4QPY7_9PHAE (Uncharacterized protein ycf35 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY7_9PHAE) HSP 1 Score: 182 bits (462), Expect = 6.390e-57 Identity = 94/135 (69.63%), Postives = 108/135 (80.00%), Query Frame = 1 Query: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVENNF--NKNIEVPLNSSKTLKSNIYSNLNQNYLAFGLNNLSYSIITDSQSWTQRERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIK 399 MSHYT IKTKYTN ILKKVI KLG+PY+EN N+NIEVP+ S+ LKS IY ++NY+AF + L Y IITDSQSWT++E I FLKK+ELNYGYSETI QALDLGF+RSKV TTN KNNRFIFQR+VE K Sbjct: 1 MSHYTCIKTKYTNSNILKKVINKLGYPYIENKCQKNQNIEVPVIFSENLKSTIYQKNHRNYVAFKSDKLDYDIITDSQSWTKKEIITRFLKKLELNYGYSETIYQALDLGFVRSKVITTNNKNNRFIFQRFVETK 135 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig966.17629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 14 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig966.17629.1 >prot_E-siliculosus-1a_M_contig966.17629.1 ID=prot_E-siliculosus-1a_M_contig966.17629.1|Name=mRNA_E-siliculosus-1a_M_contig966.17629.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=135bp MSHYTSIKTKYTNPTILKKVITKLGHPYVENNFNKNIEVPLNSSKTLKSNback to top mRNA from alignment at E-siliculosus-1a_M_contig966:837..1241- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig966.17629.1 ID=mRNA_E-siliculosus-1a_M_contig966.17629.1|Name=mRNA_E-siliculosus-1a_M_contig966.17629.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=405bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig966:837..1241- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig966:837..1241- >mRNA_E-siliculosus-1a_M_contig966.17629.1 ID=mRNA_E-siliculosus-1a_M_contig966.17629.1|Name=mRNA_E-siliculosus-1a_M_contig966.17629.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=810bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig966:837..1241- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |