Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 0 |
| Cds size | 318 |
| Model size | 321 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936541.501663-CDS-E-siliculosus-1a_M_contig962:1595..1913 | 1622936541.501663-CDS-E-siliculosus-1a_M_contig962:1595..1913 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig962 1596..1913 + |
| 1696251122.785022-CDS-E-siliculosus-1a_M_contig962:1595..1913 | 1696251122.785022-CDS-E-siliculosus-1a_M_contig962:1595..1913 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig962 1596..1913 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig962.17628.1 >prot_E-siliculosus-1a_M_contig962.17628.1 ID=prot_E-siliculosus-1a_M_contig962.17628.1|Name=mRNA_E-siliculosus-1a_M_contig962.17628.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=106bp
LGGFCRGVSHVVLSLYEDLVTSRRGGAIDTERVKFWPCTFFLHWSCVSQM
VYNQDFTYAAIVKLNHPCPELSTAPQRVSGLPGLLFTVSPSMSKLVSEKK
KRGLSV back to topmRNA from alignment at E-siliculosus-1a_M_contig962:1596..1914+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig962.17628.1 ID=mRNA_E-siliculosus-1a_M_contig962.17628.1|Name=mRNA_E-siliculosus-1a_M_contig962.17628.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=319bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig962:1596..1914+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TTAGGAGGTTTCTGCAGAGGGGTATCTCACGTTGTGCTGTCGTTGTATGA
GGATCTCGTCACTTCTCGACGTGGCGGTGCGATTGACACTGAAAGAGTCA
AGTTCTGGCCTTGCACCTTCTTTCTGCATTGGTCCTGCGTCAGTCAAATG
GTGTACAACCAGGACTTTACGTACGCGGCCATAGTGAAATTGAACCATCC
CTGTCCGGAACTTTCTACGGCGCCCCAAAGGGTATCCGGTCTTCCGGGGT
TACTGTTTACTGTTTCTCCTTCGATGTCAAAACTTGTATCTGAAAAAAAA
AAGCGAGGGTTGTCGGTGC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig962:1596..1914+ >mRNA_E-siliculosus-1a_M_contig962.17628.1 ID=mRNA_E-siliculosus-1a_M_contig962.17628.1|Name=mRNA_E-siliculosus-1a_M_contig962.17628.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=636bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig962:1596..1914+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TTAGGAGGTTTCTGCAGAGGGGTATCTCACGTTGTGCTGTCGTTGTATGA
GGATCTCGTCACTTCTCGACGTGGCGGTGCGATTGACACTGAAAGAGTCA
AGTTCTGGCCTTGCACCTTCTTTCTGCATTGGTCCTGCGTCAGTCAAATG
GTGTACAACCAGGACTTTACGTACGCGGCCATAGTGAAATTGAACCATCC
CTGTCCGGAACTTTCTACGGCGCCCCAAAGGGTATCCGGTCTTCCGGGGT
TACTGTTTACTGTTTCTCCTTCGATGTCAAAACTTGTATCTGAAAAAAAA
AAGCGAGGGTTGTCGGTGTTAGGAGGTTTCTGCAGAGGGGTATCTCACGT
TGTGCTGTCGTTGTATGAGGATCTCGTCACTTCTCGACGTGGCGGTGCGA
TTGACACTGAAAGAGTCAAGTTCTGGCCTTGCACCTTCTTTCTGCATTGG
TCCTGCGTCAGTCAAATGGTGTACAACCAGGACTTTACGTACGCGGCCAT
AGTGAAATTGAACCATCCCTGTCCGGAACTTTCTACGGCGCCCCAAAGGG
TATCCGGTCTTCCGGGGTTACTGTTTACTGTTTCTCCTTCGATGTCAAAA
CTTGTATCTGAAAAAAAAAAGCGAGGGTTGTCGGTG back to top
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