Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 408 |
| Model size | 409 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936526.8699024-CDS-E-siliculosus-1a_M_contig96:601915..602323 | 1622936526.8699024-CDS-E-siliculosus-1a_M_contig96:601915..602323 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 601916..602323 + |
| 1696251117.1839645-CDS-E-siliculosus-1a_M_contig96:601915..602323 | 1696251117.1839645-CDS-E-siliculosus-1a_M_contig96:601915..602323 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig96 601916..602323 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17627.1 >prot_E-siliculosus-1a_M_contig96.17627.1 ID=prot_E-siliculosus-1a_M_contig96.17627.1|Name=mRNA_E-siliculosus-1a_M_contig96.17627.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=136bp
SRRCQRDCLRSPATQQTNRGDTSHEEASILPRPRAHEQYKHRGRVHTEGR
AQQRPGLPSAGGVADCWLPERRRRAEEAKIPPHFPPDLHKTQDPTAGLHK
QGLAATILKGSPWLIHRCTPSFSTQRRGRRDRERG* back to topmRNA from alignment at E-siliculosus-1a_M_contig96:601916..602323+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig96.17627.1 ID=mRNA_E-siliculosus-1a_M_contig96.17627.1|Name=mRNA_E-siliculosus-1a_M_contig96.17627.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=408bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:601916..602323+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TCACGACGTTGCCAGAGGGACTGCCTTCGCTCACCTGCAACTCAGCAGAC
AAACAGAGGGGACACTTCCCACGAAGAAGCATCTATCTTACCTCGCCCCA
GAGCACACGAGCAATACAAGCATCGAGGTAGAGTGCACACAGAAGGCAGA
GCGCAGCAAAGGCCGGGACTACCTTCGGCCGGTGGCGTTGCCGATTGCTG
GTTGCCCGAACGACGCCGGCGTGCTGAGGAAGCAAAAATTCCGCCGCATT
TTCCCCCCGATCTGCACAAGACACAAGACCCGACAGCCGGGCTACACAAG
CAGGGACTCGCCGCTACTATTCTCAAAGGCTCACCATGGTTGATACACAG
ATGCACACCGAGCTTCTCCACACAGCGGCGGGGAAGAAGAGACAGAGAGA
GAGGTTGA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:601916..602323+ >mRNA_E-siliculosus-1a_M_contig96.17627.1 ID=mRNA_E-siliculosus-1a_M_contig96.17627.1|Name=mRNA_E-siliculosus-1a_M_contig96.17627.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=816bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:601916..602323+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TCACGACGTTGCCAGAGGGACTGCCTTCGCTCACCTGCAACTCAGCAGAC
AAACAGAGGGGACACTTCCCACGAAGAAGCATCTATCTTACCTCGCCCCA
GAGCACACGAGCAATACAAGCATCGAGGTAGAGTGCACACAGAAGGCAGA
GCGCAGCAAAGGCCGGGACTACCTTCGGCCGGTGGCGTTGCCGATTGCTG
GTTGCCCGAACGACGCCGGCGTGCTGAGGAAGCAAAAATTCCGCCGCATT
TTCCCCCCGATCTGCACAAGACACAAGACCCGACAGCCGGGCTACACAAG
CAGGGACTCGCCGCTACTATTCTCAAAGGCTCACCATGGTTGATACACAG
ATGCACACCGAGCTTCTCCACACAGCGGCGGGGAAGAAGAGACAGAGAGA
GAGGTTGATCACGACGTTGCCAGAGGGACTGCCTTCGCTCACCTGCAACT
CAGCAGACAAACAGAGGGGACACTTCCCACGAAGAAGCATCTATCTTACC
TCGCCCCAGAGCACACGAGCAATACAAGCATCGAGGTAGAGTGCACACAG
AAGGCAGAGCGCAGCAAAGGCCGGGACTACCTTCGGCCGGTGGCGTTGCC
GATTGCTGGTTGCCCGAACGACGCCGGCGTGCTGAGGAAGCAAAAATTCC
GCCGCATTTTCCCCCCGATCTGCACAAGACACAAGACCCGACAGCCGGGC
TACACAAGCAGGGACTCGCCGCTACTATTCTCAAAGGCTCACCATGGTTG
ATACACAGATGCACACCGAGCTTCTCCACACAGCGGCGGGGAAGAAGAGA
CAGAGAGAGAGGTTGA back to top
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