mRNA_E-siliculosus-1a_M_contig96.17577.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: D8LQ98_ECTSI (Cilia- and flagella-associated protein 53 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ98_ECTSI) HSP 1 Score: 533 bits (1372), Expect = 1.610e-185 Identity = 309/315 (98.10%), Postives = 311/315 (98.73%), Query Frame = 1 Query: 1 ENARQEELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
ENARQEE HMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLL+YAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQ+ATDLEQARLDRESFLAEEER XXXX RKRQELLDNTAKLR QMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT
Sbjct: 174 ENARQEEFHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLDYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQLATDLEQARLDRESFLAEEEREXXXXMRKRQELLDNTAKLRGQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 488
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A835YTH0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH0_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.970e-55 Identity = 137/313 (43.77%), Postives = 192/313 (61.34%), Query Frame = 1 Query: 7 ARQEELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
A ++ + A+I ER+A+LEAQE+ EE R R ++++ L QV YNA RR L +++A +D EL+ELRAIV AE++ +R AA +++D+ LL+YA+++++AGEAEE K++ E+ +RQY YLK QM +EA D + D + +AET++W+ R+A+ + DAR ALM QVH RQEQIR + L D + A EQA DRE+F E + +R LLD AKLR Q+ A RE+QEEYL +K+MEA ER H+ RLE Q+G V+ HHPLKHTQWYT
Sbjct: 177 AEEDAQYTAQIYERMAWLEAQEREREETRRRTAEVVKDGLTAQVRYNAARRMALEQRSAEEDRLELDELRAIVAAEEQXXXXXXXXXXXXXXXXXXXXXXXXXLREEAAALEQQRDMALLKYAVDRERAGEAEEHRKRDAEREAMRQYTAYLKAQMEREAEDAGKLDTAQADAETKMWEAREAEQAKRADARRALMAQVHAARQEQIRARRLADAAERAALNEQAAFDREAFARAEAQEADKERERRAALLDQAAKLRGQVDERAAARARERQEEYLSMKRMEACEREHKARLEAQSGKVVLHHPLKHTQWYT 489
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A7S3YAB2_HETAK (Cilia- and flagella-associated protein 53 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB2_HETAK) HSP 1 Score: 179 bits (454), Expect = 7.000e-48 Identity = 132/310 (42.58%), Postives = 185/310 (59.68%), Query Frame = 1 Query: 16 EELHMAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
+E +MA + +A LE +E+ +E + N M +DL+ QVA NA+RR L AR D +E+ A GA VR+FN+A+ R A E R +DL+LLE+A + G+AEE+ K+ EE+RV+R+Y+ YL+EQM KEA DE+ + R E RIWDQR+A L+AQ DAR LM QV GR+EQ+ LK L +E+ D E+A + F E+ +RQ+L DN +L+ Q+ G + E+QE+YL KQME ER+H++RL++QAGVV T+ PLKHTQWYT
Sbjct: 176 DEQYMAGVMGHVAALELKERGVQEALRQANAKMVADLDDQVAKNAERRSALAAARARGDQEEIXXXXXXXXXXXXXXXXXXXXLVAAGAAVREFNQAKAAERGRAKELERGRDLLLLEHAQRMEARGQAEEERKRAEEKRVMREYHAYLQEQMVKEAEDESAIEAHRLREENRIWDQREADLRAQADARARLMGQVKAGREEQVYLKGLAAEEERKRDQEEAMRAKIEFELMEQEAAAKQAGRRQQLADNAQRLKAQIDGNAHQRRLEEQEKYLSAKQMEMMERKHQQRLKEQAGVVETYKPLKHTQWYT 485
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A7S1XRQ7_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRQ7_9STRA) HSP 1 Score: 147 bits (372), Expect = 3.520e-36 Identity = 119/304 (39.14%), Postives = 175/304 (57.57%), Query Frame = 1 Query: 46 RIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMA-GARARA---EREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
R+ LE +E A R N+ R DL+ QV +RR QL E +D +EL EL A ++ ++++ + +EAHARG EVR FNEAR MR A R+QDL+LL+Y +E+++ AEE+AK++ E R+Y E+LKE M KEA D+++ D IR+ E R+W++RDA+L+AQ +AR LM+ VH GRQEQI+ K RD + EQ R D + +++++ DN L +Q+A +AR ERE+QE M A + +R +AG V ++P H+ WYT
Sbjct: 185 RMKVLEDREIADAHARHEANEACRRDLDEQVRIKGERRLQLIESMRKDAEEELTELAAAIQRDEDEQRRRTEEAHARGREVRAFNEARLNMRQERAALERQQDLLLLQYGMEQERKRIAEEQAKRQLEINATREYTEHLKELMIKEAQDDSEVDAIREREENRVWEKRDAELRAQTEARRRLMEIVHAGRQEQIKAKRERDAIDRILEEEQERNDAAELQKGLQMDREAAEKRKRDAQDNNTLLLKQIAMREQARLDELERERQEAEKWRADMRAVD----QRAAAEAGEVKLYYPRSHSNWYT 484
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A7S2STN1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STN1_9STRA) HSP 1 Score: 134 bits (336), Expect = 6.170e-33 Identity = 99/257 (38.52%), Postives = 155/257 (60.31%), Query Frame = 1 Query: 199 ELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATD--------LEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
EL ELRA + ++++A+ A RG + R FNE+R +R AA++ R++DLVLL+YA++K++A E KK EEQ ++Y EYL+ QM KEA D A D +R+ E R W +R+A+ K ++DAR LM+ + GRQ QIR + R+ +++ D +QA LDR AE+E +++Q + +N + +R Q+ R + +E+Q++YL K M+ E H+++L +QAG + H P KHT WYT
Sbjct: 15 ELTELRAAIARDEQEAQRHLLSAKQRGKQTRHFNESRLHIRQEAADRERQEDLVLLKYAMDKERAEIDAELRKKREEQETTKRYQEYLRAQMIKEAQDTALADSLRKADEDRNWAKREAEQKRRDDARANLMQVTNDGRQRQIRERLERETKELEEDRGDGQRFAADQAELDR--IEAEKE------AKRKQNVAENLSGIRSQIEIRRQQQMKEEQDKYLEAKIMQKVEAEHKKKLSEQAGTLRLHRPKKHTAWYT 263
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A4D9D339_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D339_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.150e-19 Identity = 82/251 (32.67%), Postives = 131/251 (52.19%), Query Frame = 1 Query: 187 DDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQW 939
+D +E+ +++ + E+E AE +KK G ++R FNE R + AE+ R+QD+ LL YA+E++ A EK + + + R Y +YL+E M KE DE + + IR E +W+QR+A L+ + ++AL ++ RQ+Q+ KAL E+ + AEEE R +L N L +Q R R E+Q+EYLR K ++ E + R ++QAGV H PL+ +W
Sbjct: 80 EDAREIAQIQIELTREKELAEKRKKADWLEGQKIRAFNEQRLGLMRARAEEERQQDMTLLNYALEEEAKSVAAEKDRGVKAREESRLYRKYLEELMQKEVEDEREIESIRLAKEEEVWEQREAVLQEREAKKKALWLEIDATRQQQLLYKALTAAEESEAESTLVGRWEAEQKAEEEECQRSKEAHRLAILSNREVLEKQTKALRHRVALEEQQEYLRTKHVQKEEADQQRRRQEQAGVARIHFPLRSQKW 330
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A7S0GFB1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFB1_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.030e-19 Identity = 82/222 (36.94%), Postives = 126/222 (56.76%), Query Frame = 1 Query: 304 ARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEE--------YLRVKQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
AR + R+ + RE DLVLL+YA++K+ K+KKE E+++ R+Y +LK+QM KE + + D+IR +IW +RD L+AQ DAR L+K+V +GRQEQ+R+K L ++E+ EQAR + EEE +R E N K E+M + A+ +Q+E +LR K EA E + + RL++ + ++PLK+T WYT
Sbjct: 239 ARYQQRIEVKARERENDLVLLKYALKKESDSTDCNKSKKENEKKLSREYEAFLKDQMQKEKDENLKVDDIRATEMEKIWVKRDEALQAQADARGNLLKEVQKGRQEQMRIKILVEEEEKEASAEQARFVAQKLKVEEEN-------ERDENSRNKVKTVERMRANKYLADHNKQQEQAKESEKYHLRKKMQEA-ETKRQMRLDQLKCNPVAYYPLKNTNWYT 452
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A6G0XRX0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRX0_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.070e-15 Identity = 83/231 (35.93%), Postives = 132/231 (57.14%), Query Frame = 1 Query: 256 KKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLE-QARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVV-ITHHPLKHTQWY 942
K++A AR +V+ FN+ R EM A + RE D LL+ A++K+ EA E+ +E+ +R +Y L++QMA EA D + D IR++ E +W +RDA+ +A+ DARE L+ QV + RQEQI K + A D AR+ RES A ++ RK +E + A L Q A A+ AE+++Q E+L +K+M E++H+ +L A + ++ K ++WY
Sbjct: 241 KRKAIARATDVKKFNQKRAEMAEREARREREYDTQLLKLALQKEADTEARERQLQEKFKRDQLEYQAMLRQQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEQDAREELLAQVVQSRQEQIVRKGQIKQQDAANDAAYMARMQRESDEALQKELLEQEKRK-EEAKRHQADLMAQKAAAKLAAEKQKQAEFLDMKRMTLTEKQHQAKLAALAKQPPVFNYRRKTSEWY 470
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: A0A482SE17_9ARCH (Cilia- and flagella-associated protein 53 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE17_9ARCH) HSP 1 Score: 82.0 bits (201), Expect = 2.250e-14 Identity = 78/221 (35.29%), Postives = 109/221 (49.32%), Query Frame = 1 Query: 295 FNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLEQARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRV----KQMEAYERRHRERLEKQAGVVITHHPLKHTQWYT 945
FN R+ R + REQD VLL+YA+ K+ A E+AK+ +++ +Y +YL+EQM KEA D A DEIR+ E ++W RD L+A++DAR LMK V GRQEQIR K DE+ + E ++ FL E + + + KQM+ ER H++RL +QAG V PL+ QWYT
Sbjct: 3 FNAENRKYREEESLVEREQDGVLLDYALRKEAEQIAAEEAKRSGQRQAALRYRKYLEEQMVKEAEDTAFVDEIRKREEEKVWKARDDALRARDDARNYLMKMVDEGRQEQIRYK----DERERAEKEHDKIFARKFLDEADEAVRKERAEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKQMKHMERMHQQRLAEQAGSVRLAFPLQKNQWYT 219
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Match: W4FWZ1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWZ1_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.260e-12 Identity = 76/231 (32.90%), Postives = 131/231 (56.71%), Query Frame = 1 Query: 256 KKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLEYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQVHRGRQEQIRLKALRDDEQVATDLE-QARLDRESFLAEEERXXXXXXRKRQELLDNTAKLREQMAGARARAEREQQEEYLRVKQMEAYERRHRERLEKQAGVVIT-HHPLKHTQWY 942
K++A AR +V+ FN+ R ++ A + E D LL+ A+ ++ +A E+A +E+ +R +Y L++QMA EA D + D IR++ E +W +RDA+ +A++DAR+ L+ QV + RQ+Q+ K LR A D AR+ RES A ++ RK + N + Q A +A E+++Q E+L +K+M E++H+ +L + A T ++ K ++WY
Sbjct: 294 KRKAVARAMDVKKFNQTRSDLTERQARREHEYDTQLLQLALRQEAETDARERALQEKFKRDQLEYQAMLRKQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEDDARQELLAQVLQSRQDQMERKELRKAADAAADAAYMARMQRESDEALQKELTDQDKRK-WDAKRNQVDVVAQKAQTKALMEKQKQAEFLDMKRMALSEKQHKLKLAQLATQQPTLNYRRKTSEWY 523 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 14 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17577.1 >prot_E-siliculosus-1a_M_contig96.17577.1 ID=prot_E-siliculosus-1a_M_contig96.17577.1|Name=mRNA_E-siliculosus-1a_M_contig96.17577.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=307bp MAKIRERIAYLEAQEKAAEEKRERRNQLMRSDLNTQVAYNADRRRQLWEQback to top mRNA from alignment at E-siliculosus-1a_M_contig96:214557..219907+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig96.17577.1 ID=mRNA_E-siliculosus-1a_M_contig96.17577.1|Name=mRNA_E-siliculosus-1a_M_contig96.17577.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5351bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:214557..219907+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:214557..219907+ >mRNA_E-siliculosus-1a_M_contig96.17577.1 ID=mRNA_E-siliculosus-1a_M_contig96.17577.1|Name=mRNA_E-siliculosus-1a_M_contig96.17577.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1842bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:214557..219907+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |