mRNA_E-siliculosus-1a_M_contig96.17576.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: D8LQ98_ECTSI (Cilia- and flagella-associated protein 53 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ98_ECTSI) HSP 1 Score: 320 bits (820), Expect = 5.090e-105 Identity = 170/176 (96.59%), Postives = 172/176 (97.73%), Query Frame = 2 Query: 116 MFGEARYKPRQNSHQGQFARKREKERRWEQSVEGIAATDKVIAFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREEASA 643 MFGEARYKPRQNSHQGQFARKREKERRWEQSVE IAATDKVIAFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYN EMEQWEHEILNSAETMEERKTRIL+KATKLKN REAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREE +A Sbjct: 1 MFGEARYKPRQNSHQGQFARKREKERRWEQSVESIAATDKVIAFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNLEMEQWEHEILNSAETMEERKTRILDKATKLKNAREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREEENA 176
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: A0A835YTH0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH0_9STRA) HSP 1 Score: 160 bits (404), Expect = 5.460e-43 Identity = 88/160 (55.00%), Postives = 115/160 (71.88%), Query Frame = 2 Query: 149 NSHQGQFARKREKERRWEQSVEGIAATDKVIAFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAR 628 N+HQG+F + R +ER+ E S+ I T + +A WENKT AIA+R G DR+ L AD AL RRRR+A +EM +WEHE+LN ET+E+RK RI EKATKL++ REAAR+ +VQ+ YD+QWRD+CD +RTLDSKA +WV AQR +Q+ EKA R Sbjct: 13 NTHQGRFEKTRAQERQLENSIASINKTRAALQYATWENKTHDAIAARQGRDRMTRLTEADKAALEGRRRRLAAQRQQEMAEWEHEVLNRTETLEQRKERIREKATKLRDAREAARKQFVQDMYDKQWRDSCDASRTLDSKAFLDWVNAQREQQLEEKALR 172
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: A0A7S3YAB2_HETAK (Cilia- and flagella-associated protein 53 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB2_HETAK) HSP 1 Score: 117 bits (293), Expect = 3.950e-27 Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 140 PRQNSHQGQFARKREKERRWEQSVEGIAATDKVIAFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAR 628 PR Q F ++RE+E + E + A WE +T I +R +R+R L A+ LL RRRR+ADLYN EMEQW E+L + E+ E+RK R+ E+A L+ RE R+ +VQ+ YDR+WRDACDDAR LDS+A ++V +R Q++EK R Sbjct: 6 PRGVRPQDMFMKRREQEAQRENFTAATQQVAHLQRLAKWEARTDSVINNRLQKERLRELTEANEQELLGRRRRLADLYNSEMEQWTREVLENVESPEDRKRRMRERALALQAAREEKRQAFVQDAYDRRWRDACDDARALDSQALLDFVAQERLSQLSEKGRR 168
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: A0A812P941_SYMMI (Cilia- and flagella-associated protein 53 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812P941_SYMMI) HSP 1 Score: 102 bits (254), Expect = 1.000e-21 Identity = 59/134 (44.03%), Postives = 89/134 (66.42%), Query Frame = 2 Query: 218 IAATDKVIAFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEK 619 I+ + + AN+E T I +R DR++ + + ++ RRR VAD++N EM+QW+ E+L + ET E+RK RI+E+A L++ RE AR+++V+ DRQWRDACDDARTLDS+A V+ +R Q+ EK Sbjct: 30 ISENKRRMQIANFEISTQKKIETRMKMDRIKDMRRQNEISIHHRRRLVADMFNDEMDQWQAEVLANVETQEDRKARIMERAYALRDERERARQDHVKSSLDRQWRDACDDARTLDSEALLSLVSRERKAQIDEK 163
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: A0A7S1XRQ7_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRQ7_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.070e-16 Identity = 64/146 (43.84%), Postives = 85/146 (58.22%), Query Frame = 2 Query: 164 QFARKREKERRWEQSVEGIAATDKVIAFANWENKTAGAIASRAGAD-RVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQR 598 Q A R K E+ + I + + + A+WENKT I R A R R E A A+ L ARR R+ LY+ E W E+ + ET E+RK R+ KA LKN REAA+ ++V+ +QWRD+CD+ARTLDSKA +VTA R Sbjct: 13 QMALNRRKNEATEERIAHIGLSREALLKADWENKTQSRIEQRQEALLRARDEETA-AERLRARRARLKGLYDAEYGGWITEMQSETETAEQRKERLRSKAMALKNRREAAQASFVEAKRQQQWRDSCDEARTLDSKALLHYVTAAR 157
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: A0A1V9YL46_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YL46_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.150e-15 Identity = 56/135 (41.48%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 242 AFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREEASAA 646 A A+WE K R + +L+ D AL +RR ++A LYN E+E+W L + ET E+RK +++ +AT+LK REAAR+ YV+E + +R CDD RT+DS A V A+R Q+A AAR++ AA Sbjct: 42 ARADWETKAHEQSGHRTTQRVLHALKNQDESALQSRRLKLAALYNAELEEWRAMCLANVETPEQRKAKMIARATELKAKREAARQAYVEEKRSQLYRQGCDDIRTIDSAAVMAQVVAERETQLAAAAARQKDEAA 176
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: B8BRA0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRA0_THAPS) HSP 1 Score: 81.6 bits (200), Expect = 1.970e-14 Identity = 51/150 (34.00%), Postives = 85/150 (56.67%), Query Frame = 2 Query: 173 RKREKERRWEQSVEGIAATDKVIAFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKT-RILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEK 619 R+R++ER ++ + + +WEN+T I R ++ + + D D L R+ + LYNREM +W+ + S E +E K +I ++A +LK RE+ R+ +V+ECY+R+WR+ACDD R LDSKA + + R + +K Sbjct: 11 RRRDRERILHETESFLHQHNNTERLLDWENRTQQQIQQREESNLAQQFQKQDEDELNKRQNELQSLYNREMSEWKDTLQRSLEVSQEEKIEQIRKRAYELKARRESERQKFVKECYERRWREACDDLRALDSKATLDRLMKDRKAMIQKK 160
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: A0A067CRW0_SAPPC (Cilia- and flagella-associated protein 53 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRW0_SAPPC) HSP 1 Score: 79.7 bits (195), Expect = 9.450e-14 Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = 2 Query: 248 ANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEKAAREEASAA 646 A+WE K R + L+ D AL +RR ++A LYN E+EQW+ L + ET EERK +++ +AT+LK REAAR YV+E +Q+R+ CDD RT+DS V A+R Q+A A R++ AA Sbjct: 42 ADWETKAHEQNGQRQTQRVLGILQNQDESALQSRRLKLAALYNAELEQWKAMCLANVETPEERKAKMIARATELKAKREAARVAYVEEKRLQQYREGCDDIRTVDSATVMAEVVAERERQLAALAERQKEEAA 174
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: A0A024U657_9STRA (Cilia- and flagella-associated protein 53 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U657_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.830e-12 Identity = 48/126 (38.10%), Postives = 76/126 (60.32%), Query Frame = 2 Query: 242 AFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSAETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDSKANTEWVTAQRWEQVAEK 619 A A+WE K R +++L+ D L +RR ++A L N E+E W+ L++ ET EERK +++ +AT+LK REAAR+N+V+ +Q+R++CDD RTL+S V R +Q+ E+ Sbjct: 81 ARADWETKLHEKAGVRETLTVLKTLKNQDESNLASRRLKLASLMNAELETWKQMCLHNVETPEERKQKMIARATELKTRREAARKNFVEAKRQQQYRESCDDNRTLESAFILSQVVQDREKQLEER 206
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Match: A0A7S0GFB1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFB1_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 6.470e-12 Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 233 KVIAFANWENKTAGAIASRAGADRVRSLEGADADALLARRRRVADLYNREMEQWEHEILNSA-ETMEERKTRILEKATKLKNVREAARRNYVQECYDRQWRDACDDARTLDS 565 KV A WE KT I R +RVR E R+ V+ + + EME W+ ++ S T EER +I EKA +LK RE R+N+V ECYD+QWRD CD+ R +DS Sbjct: 4 KVEFNAQWETKTTEKIKKREIIERVRESEETKQKRTEERKNAVSTMLHNEMEDWKGKLAFSRIVTPEERMIQIREKAVRLKEAREENRQNFVNECYDKQWRDDCDEIRAMDS 115 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17576.1 >prot_E-siliculosus-1a_M_contig96.17576.1 ID=prot_E-siliculosus-1a_M_contig96.17576.1|Name=mRNA_E-siliculosus-1a_M_contig96.17576.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=179bp MFGEARYKPRQNSHQGQFARKREKERRWEQSVEGIAATDKVIAFANWENKback to top mRNA from alignment at E-siliculosus-1a_M_contig96:209566..213969+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig96.17576.1 ID=mRNA_E-siliculosus-1a_M_contig96.17576.1|Name=mRNA_E-siliculosus-1a_M_contig96.17576.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4404bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:209566..213969+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:209566..213969+ >mRNA_E-siliculosus-1a_M_contig96.17576.1 ID=mRNA_E-siliculosus-1a_M_contig96.17576.1|Name=mRNA_E-siliculosus-1a_M_contig96.17576.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1074bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:209566..213969+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |