mRNA_E-siliculosus-1a_M_contig96.17565.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17565.1 vs. uniprot
Match: A0A6H5LKJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKJ8_9PHAE) HSP 1 Score: 116 bits (290), Expect = 4.880e-28 Identity = 77/103 (74.76%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 1 NAQFPPSNRPSGGILPLERAAAKPAXXXXXXXSVACLPADSALDAAAETAVGTDAXXXXXXGGVVALGVRMGGKAGELLERLKREREESLDFERKLTQALMDL 309
NAQ P S SGG+LP ERA XXXXXXXS+AC P SALDAAAETA GTDA GG V LGVRMGGKA ELLERLKREREESLDFERKLTQALMDL
Sbjct: 700 NAQPPLSYGQSGGLLPPERAXXXXXXXXXXXXSLACWPVGSALDAAAETATGTDAGAAAASGGFVVLGVRMGGKAAELLERLKREREESLDFERKLTQALMDL 802 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17565.1 >prot_E-siliculosus-1a_M_contig96.17565.1 ID=prot_E-siliculosus-1a_M_contig96.17565.1|Name=mRNA_E-siliculosus-1a_M_contig96.17565.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=104bp NAQFPPSNRPSGGILPLERAAAKPAAAAAGGGSVACLPADSALDAAAETAback to top mRNA from alignment at E-siliculosus-1a_M_contig96:146210..146521- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig96.17565.1 ID=mRNA_E-siliculosus-1a_M_contig96.17565.1|Name=mRNA_E-siliculosus-1a_M_contig96.17565.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=312bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:146210..146521- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:146210..146521- >mRNA_E-siliculosus-1a_M_contig96.17565.1 ID=mRNA_E-siliculosus-1a_M_contig96.17565.1|Name=mRNA_E-siliculosus-1a_M_contig96.17565.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=624bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:146210..146521- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |