mRNA_E-siliculosus-1a_M_contig96.17564.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: D8LQA7_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA7_ECTSI) HSP 1 Score: 543 bits (1400), Expect = 4.590e-193 Identity = 272/283 (96.11%), Postives = 274/283 (96.82%), Query Frame = 2 Query: 32 MLLPRCWIHVPLALLLLSLSFGRRVRNEAFLINISSRIIGISSSRHAHATRQPNDRPPLRLPWGYDRRQQRARPAPHAAGESASVDTDVRDLKEKAPLVKIKPAKFHNLRAVSRLLVAEFYGSTIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDGSLAGFVDIDGREKRPGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGFMVETTSGKPNDVMLCGDLRARRRRAVAGAPEAE 880 MLLPRCWIHV LALLLLS SFGRRVRNEAFLIN+SSRIIGISSSR HATRQPNDRPPLRLPWGYDRRQQR RPA AAGESASVDTDVRDLKEKAPLV+IKPAKFHNLRAVSRLLVAEFYGSTIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDGSLAGFVDIDGREKRPGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGFMVETTS KPNDVMLCGDLRARRRR VAGAPEAE Sbjct: 1 MLLPRCWIHVLLALLLLSFSFGRRVRNEAFLINVSSRIIGISSSRPTHATRQPNDRPPLRLPWGYDRRQQRPRPARQAAGESASVDTDVRDLKEKAPLVEIKPAKFHNLRAVSRLLVAEFYGSTIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDGSLAGFVDIDGREKRPGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGFMVETTSDKPNDVMLCGDLRARRRREVAGAPEAE 283
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: A0A835Z109_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z109_9STRA) HSP 1 Score: 119 bits (299), Expect = 8.510e-29 Identity = 71/146 (48.63%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 332 IKPAKFHNLRAVSRLLVAEFYG-STIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDGSLAGFVDIDGREKRPGQTGV---RPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYV 757 ++ A++ +L VSRLLV EFYG ++IWYPAQCL ELNRLQ NFH D RHLML+AT G + GFVDID R+ P + RPYLSDLAVA RR GIGT+LV+A N LYE +GY+ Sbjct: 23 LRHAEWRDLGPVSRLLVTEFYGGNSIWYPAQCLSELNRLQMNFHF---DRERHLMLVATEPAQGGIVGFVDIDARDVPPAKRNEYPPRPYLSDLAVAKNQRRKGIGTQLVQAT-------------------NAGGLALYEAMGYL 146
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: A0A7S4K497_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K497_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.360e-19 Identity = 60/161 (37.27%), Postives = 91/161 (56.52%), Query Frame = 2 Query: 332 IKPAKFHNLRAVSRLLVAEFYG-STIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDGSLAGFVDIDGREKRPGQTGV----RPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGFMVETTS 799 ++ A+F +L AV+ + V FY ++ ++EL+R+Q NF D+ H +A S ED S+ FVD+D R K P G+ RPYLSDLAV D +RR G+ T++V CED GY+ ++L+V N AA +Y +GY V + + +TT+ Sbjct: 115 VRSARFKDLNAVANIFVDSFYDPKSMLKHYYRMLELDRIQNNFP---YDSEWHEYYVACSSEDDSVIAFVDVDAR-KLPPHWGMSAPPRPYLSDLAVRDDWRRRGVATQMVVHCEDKARAMGYNRLFLRVEGDNDAALSMYARMGYKVQEHPYFGVKDTTT 271
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: A0A7S4EDE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDE6_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 3.940e-17 Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 326 VKIKPAKFHNLRAVSRLLVAEFYG--STIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDGSLAGFVDIDGR-EKRPGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVV 760 V + A +L S LLV F+G + + E RL+E+ G +H+ L+A S G G+VD DGR K PG+ RPY+SDLAV + YRR G+ T LV+ CE W +D ++LKV N AA K+Y LGY V Sbjct: 150 VLLLEAGIEDLGEASVLLVTSFFGERNPSFLAVAAHREHRRLREHHGG-----DKHIQLIARSPA-GDAVGYVDCDGRPSKSPGRP--RPYVSDLAVREDYRRRGLATCLVQKCESIVKAWAFDRVFLKVEASNEAARKMYGELGYEV 289
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: A0A7S2LAD6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAD6_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.250e-16 Identity = 64/168 (38.10%), Postives = 87/168 (51.79%), Query Frame = 2 Query: 332 IKPAKFHNLRAVSRLLVAEFYG-STIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDG-SLAGFVDIDGREKRPG--QTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGFMVETTSGKPNDVML 823 I+ AK+ +L V+R++V FY ++ + EL R+Q NF D S+H ML+A S D ++ GFVDID RE + RPYLSDLAV +RR GI + L+ ACE WG D + L+V N A +Y LGY F+ GK + ML Sbjct: 119 IREAKYSDLPDVARIIVEAFYPIKPLFNHYHMIKELARIQNNFP---YDDSKHSMLVAVSNTDNKTVVGFVDIDAREPKTKLPMNPPRPYLSDLAVDIYWRRKGIASALIVACEMIVEGWGEDYLNLRVEAVNEPALTMYARLGY-------NFVEHHWFGKKDTTML 276
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: UPI001F552BC4 (GNAT family N-acetyltransferase n=2 Tax=Nostoc sp. FACHB-110 TaxID=2692834 RepID=UPI001F552BC4) HSP 1 Score: 82.4 bits (202), Expect = 1.460e-14 Identity = 51/149 (34.23%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 332 IKPAKFHNLRAVSRLLVAEFYGST-IWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVED---GSLAGFVDIDGRE----KRPGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGY 754 I+ A +L +S+++ F+ T W A L+ L ++ A H+ L+A ++ G V++ R K+ G++ PYLS+LAVA +YRR G+ ++L+ +CED C EWGY ++YL V E N A +LY LGY Sbjct: 37 IRAATPADLTGISQIIAESFHSQTGFWGWAFPLLRLGIYEDFRQRLSSSAPHHICLVAVDTSTPGVNNVVGTVELGLRFHDSWKQSGKS--FPYLSNLAVAHKYRRHGVASKLLTSCEDICREWGYQDLYLHVLEDNHQARQLYCKLGY 183
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: UPI001E2DCBB6 (GNAT family N-acetyltransferase n=1 Tax=Nostoc sp. CHAB 5844 TaxID=2780405 RepID=UPI001E2DCBB6) HSP 1 Score: 79.3 bits (194), Expect = 1.620e-13 Identity = 50/157 (31.85%), Postives = 83/157 (52.87%), Query Frame = 2 Query: 329 KIKPAKFHNLRAVSRLLVAEFYGST-IWYPAQCLVELNRLQENFHGYGEDASRHLMLLA---TSVEDGSLAGFVDIDGREKRPGQTGVR--PYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGF 781 +I+ A +L +S+++ F+ T W A L+ L ++ + A H+ L+A T +L G V++ R + R PYLS+LAV ++YRR G+ ++L+ +CE C EWG+ ++YL V E N A +LY LGY ++ S + Sbjct: 31 QIRAATATDLTGISQIIAESFHSQTGFWGWAFPLLRLGIYEDFRNRLLSPAPHHICLVAIDTTITGANNLVGTVELGLRFHNSWKQDGRSFPYLSNLAVDEKYRRNGVASKLLLSCEKLCHEWGFKDLYLHVLEDNYQARQLYFKLGYRMHKVESNW 187
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: A0A218QEF3_9CYAN (GCN5-related N-acetyltransferase n=5 Tax=Nostocales TaxID=1161 RepID=A0A218QEF3_9CYAN) HSP 1 Score: 78.6 bits (192), Expect = 3.720e-13 Identity = 52/155 (33.55%), Postives = 80/155 (51.61%), Query Frame = 2 Query: 329 KIKPAKFHNLRAVSRLLVAEFYGST-IWYPAQCLVELNRLQENFHGYGEDASRHLMLLA--TSVEDGSLAGFVDIDGREKRPGQTGVR---PYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNS 775 +I+ A +L V+ ++ F+ +W A L+ L ++ H A H+ L+A T+ L G V++ G T V PYLS+LAV +YRR+G +EL+KACE+ + WG+ ++YL V E N A +LY GY V+ S Sbjct: 43 QIRAATPADLTNVAEIITESFHSPNGMWGWAFPLLRLGIYEDLRHRLATSAPHHICLVAVDTTATTDKLVGTVEL-GVRFGDSWTAVGKSFPYLSNLAVHPKYRRLGAASELLKACEEVALLWGFKDLYLHVLENNHQARQLYFKAGYQVHQVES 196
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: A0A8J7DIP4_9CYAN (GNAT family N-acetyltransferase n=1 Tax=aff. Roholtiella sp. LEGE 12411 TaxID=1828822 RepID=A0A8J7DIP4_9CYAN) HSP 1 Score: 76.6 bits (187), Expect = 1.300e-12 Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 2 Query: 329 KIKPAKFHNLRAVSRLLVAEFYGST-IWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDG---SLAGFVDIDGREKRPGQTGVR--PYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGF 781 +I+ A +L +V++++ F+ +W L+ L ++ H + L+A V +G +L G V++ R R PYLS+LAV +YRR G+G+EL+ +CE +WG+ ++YL V E N A +LY LGY V+ S + Sbjct: 26 QIRAATSADLTSVAQIITDSFHSQKGMWGWTFPLLRLGVYEDLRHRLASPTPHQVCLVAVDVTNGEANNLVGTVEMSVRLSDSWAQFGRSFPYLSNLAVHPKYRRHGVGSELLISCEKVSQDWGFQDLYLHVLENNYQARQLYFKLGYRVHKVESNW 182
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Match: A0A846ADR3_9CYAN (GNAT family N-acetyltransferase n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846ADR3_9CYAN) HSP 1 Score: 76.3 bits (186), Expect = 1.550e-12 Identity = 50/180 (27.78%), Postives = 83/180 (46.11%), Query Frame = 2 Query: 329 KIKPAKFHNLRAVSRLLVAEFYGSTIW-YPAQCLVELNRLQENFHGYGEDASRHLMLLATSVEDG-----SLAGFVDIDGREKR--PGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVYSNNSGFMVETTSGKPNDVMLCGDLRAR 844 +++PA +L ++ LL A FY W Y L+ L ++ H + + + S + + G V+I R + P PY+S+LAV ++RR G +L++ACE A WG+ +YL V E N A +LY +GY + + GKP ++L L ++ Sbjct: 20 QVRPAGAEDLSQLADLLAASFYSRAGWMYFGYPLLRLGIYEDLKHRFRSQLAFYACFAVQSADSSLFNQHQIVGTVEISCRPAQTWPFSFAKYPYVSNLAVDQKFRRRGAARQLLQACEQAARSWGFHTLYLHVMEDNQQARQLYSKMGYNLKQAEWNPLAALL-GKPQRLLLYKQLASK 198 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig96.17564.1 >prot_E-siliculosus-1a_M_contig96.17564.1 ID=prot_E-siliculosus-1a_M_contig96.17564.1|Name=mRNA_E-siliculosus-1a_M_contig96.17564.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=284bp MLLPRCWIHVPLALLLLSLSFGRRVRNEAFLINISSRIIGISSSRHAHATback to top mRNA from alignment at E-siliculosus-1a_M_contig96:141856..144677+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig96.17564.1 ID=mRNA_E-siliculosus-1a_M_contig96.17564.1|Name=mRNA_E-siliculosus-1a_M_contig96.17564.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=2822bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:141856..144677+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:141856..144677+ >mRNA_E-siliculosus-1a_M_contig96.17564.1 ID=mRNA_E-siliculosus-1a_M_contig96.17564.1|Name=mRNA_E-siliculosus-1a_M_contig96.17564.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1704bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:141856..144677+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |