mRNA_E-siliculosus-1a_M_contig96.17554.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_M_contig96.17554.1
Unique Name	mRNA_E-siliculosus-1a_M_contig96.17554.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: A0A6H5LNG1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNG1_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 1.210e-182
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 2

Query:  515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPGTSN 1303
            MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPGTSN
Sbjct:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPGTSN 263

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: D7G3N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N5_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 4.670e-162
Identity = 229/230 (99.57%), Postives = 230/230 (100.00%), Query Frame = 2

Query:  515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE 1204
            MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPG+SRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE
Sbjct:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGISRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE 230

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: A0A835Z323_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z323_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 2.320e-151
Identity = 211/260 (81.15%), Postives = 241/260 (92.69%), Query Frame = 2

Query:  515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPG 1294
            MSSM+LS  Q+NE+LFVGFNQD GCFACGTDNGFRIYNVDPFRETFRRVFS  G+GIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVV LA +IYVYRFSDL LLD+INTI+N+ GL+ALC D+SNMVLACPG+SRGHVNVELYD R+STL+PAHES+LAQLAL+ DG +VATAS +GTL+RVFDT +G+L+ ELRRGMDRA+++SICFNQ S+++ACCSDRGTVHIF L+ G
Sbjct:    1 MSSMNLSKEQENEILFVGFNQDSGCFACGTDNGFRIYNVDPFRETFRRVFS-AGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVALAHKIYVYRFSDLKLLDQINTIKNESGLLALCPDSSNMVLACPGISRGHVNVELYDTRKSTLVPAHESDLAQLALNSDGSLVATASDKGTLIRVFDTSSGALVQELRRGMDRADITSICFNQTSSYLACCSDRGTVHIFDLKGG 259

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: A0A4D9CZG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZG2_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 3.310e-140
Identity = 198/257 (77.04%), Postives = 230/257 (89.49%), Query Frame = 2

Query:  515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSL 1285
            MSSMSL+ +Q+NELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRR+F NGGIGIVEMLFR NL+ALVGGGRNPR+PPNKVMIWDDHQ+RC+GELSFRSEVKAV+LRRDRVVVVL  +IYVYRF DLHL D+++T+ N +GLVALC D +N VLACPG+++G V VELYD R+STLIPAHESELAQ+AL++DG  +ATAS +GTL+RVFDT +G LL ELRRGMDRAE+ S+ FN  STFVAC S +GTVHIF++
Sbjct:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALCPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAV 257

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: W7U6T1_9STRA (Wd repeat domain phosphoinositide-interacting protein 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6T1_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 6.760e-139
Identity = 197/257 (76.65%), Postives = 229/257 (89.11%), Query Frame = 2

Query:  515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSL 1285
            MSSMSL+ +Q+NELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRR+F NGGIGIVEMLFR NL+ALVGGGRNPR+PPNKVMIWDDHQ+RC+GELSFRSEVKAV+LRRDRVVVVL  +IYVYRF DLHL D+++T+ N +GLVAL  D +N VLACPG+++G V VELYD R+STLIPAHESELAQ+AL++DG  +ATAS +GTL+RVFDT +G LL ELRRGMDRAE+ S+ FN  STFVAC S +GTVHIF++
Sbjct:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQMALNLDGTRLATASDKGTLVRVFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFAV 257

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: A0A067CH88_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH88_SAPPC)

HSP 1 Score: 392 bits (1008), Expect = 2.060e-131
Identity = 184/257 (71.60%), Postives = 221/257 (85.99%), Query Frame = 2

Query:  515 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSL 1285
            M++M+LS  Q+NELLFVGFNQDYGCFACGTD GFRIYN DPF+ETFRR FS+GGIGIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL  +IYVY F+DL LLD I TI N +GLVALC  ++N VLACPGVSRG V +ELYD R++TLI AHE++L+Q+ L+++G  +ATAS +GTL+R+FDT +G L  ELRRG D+AE+ S+CF+  S ++AC SD+ TVHIF+L
Sbjct:    1 MAAMNLSREQQNELLFVGFNQDYGCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLLDHIETIANPKGLVALCPSSTNTVLACPGVSRGTVRIELYDQRKTTLITAHEADLSQMCLNLEGTRLATASDKGTLIRIFDTQSGQLTQELRRGADKAEIYSVCFSPNSQYLACSSDKHTVHIFAL 257

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: A0A485KXM0_9STRA (Aste57867_13230 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KXM0_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 4.930e-131
Identity = 188/263 (71.48%), Postives = 226/263 (85.93%), Query Frame = 2

Query:  506 AREMSSMSLSNNQKNELLFVGFNQDYG---CFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSL 1285
            +R MSSM+LS  Q+NELLFVGFNQDYG   CFACGTD GFRIYN DPF+ETFRR FS+GGIGIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL  +IYVY FSDL LLD I TI N +GL ALC +++N VLACPGVSRG V +ELYD+R++TLI AHE++L+Q+AL+++G  +AT+S +GTL+RVFDT +G L+ ELRRG D+AE+ S+CF+  S ++AC SD+ TVHIF+L
Sbjct:   39 SRPMSSMNLSREQQNELLFVGFNQDYGTMRCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLLDHIETITNPKGLCALCPNSTNTVLACPGVSRGTVRIELYDMRKTTLITAHEADLSQMALNLEGTRLATSSDKGTLIRVFDTQSGQLMQELRRGADKAEIYSVCFSPNSQYLACSSDKYTVHIFAL 301

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: A0A7S3JWF9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWF9_9STRA)

HSP 1 Score: 383 bits (984), Expect = 7.830e-127
Identity = 177/249 (71.08%), Postives = 217/249 (87.15%), Query Frame = 2

Query:  542 QKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLE 1288
            +K+ELLFV FNQD+GCFACGT++GFRIYNVDPF+ETFRR F  GGIGIVEMLFRCNLLALVGGG +PRYPPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVV LA ++YVYRFSDL LLD+I+T  N +GL ALCAD ++ VLACPGV++GHV +ELYD R+ST++ AHES+L +LAL+ DG +VATAS +GTL+R+FDT TG+ + ELRRG+DRA + +I F+  S +VAC SD+GT H+FS++
Sbjct:   16 EKSELLFVSFNQDFGCFACGTESGFRIYNVDPFKETFRRAFRGGGIGIVEMLFRCNLLALVGGGSSPRYPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVALATKVYVYRFSDLKLLDQISTQVNSRGLAALCADPAHNVLACPGVNKGHVRIELYDSRKSTIVAAHESDLCRLALNSDGSLVATASDKGTLVRIFDTHTGAQVRELRRGVDRAIIYAIAFDPDSKYVACTSDKGTAHVFSIQ 264

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: A0A7S2CPD6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPD6_9STRA)

HSP 1 Score: 380 bits (976), Expect = 7.760e-126
Identity = 179/250 (71.60%), Postives = 218/250 (87.20%), Query Frame = 2

Query:  551 ELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPGTS 1300
            ELL++GFNQD+GCFACG DNGFRIYN +PF+ETFRR    GGIGIVEMLFRCNLLALVGGGRNP++PPN V IWDDHQ+R IGEL FRSEVKAV+LRRDRVVVVL  +IYVYRFSDL LLD+I+T++N +GL+ALC DASN+VLACPGV++G+V VELYD+R+S++IPAHESEL+Q+AL++DG  +ATAS +GTL+RVFDT TG +L ELRRGMDRA +  + FN+ S F+AC SD+GTVHIF+L   T+
Sbjct:    8 ELLYLGFNQDHGCFACGMDNGFRIYNCEPFKETFRRAMK-GGIGIVEMLFRCNLLALVGGGRNPKFPPNIVKIWDDHQNRAIGELMFRSEVKAVKLRRDRVVVVLLHKIYVYRFSDLKLLDQISTLKNPKGLIALCPDASNVVLACPGVTKGNVRVELYDMRKSSIIPAHESELSQIALNLDGTRLATASDKGTLIRVFDTHTGDILKELRRGMDRAVIHCVTFNKTSDFLACSSDKGTVHIFALGDKTA 256

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BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Match: F0Y5R4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R4_AURAN)

HSP 1 Score: 370 bits (949), Expect = 1.660e-123
Identity = 179/233 (76.82%), Postives = 206/233 (88.41%), Query Frame = 2

Query:  596 CGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRGTVHIFSLEPG 1294
            CGT++GFRIYNVDPF+ETFRRVFS GG+G+VEMLFRCNLLALVGGGR+PRYPPNKVMIWDDHQ+RCIGELSFRS+VKAV+LRRDRVVVVLA ++YVYRFSDL LLD+INT  N +GLVALC   SN VLACPGV+RGHV VELYD R+ST+I AHES+LA+LALS DG +VATAS +GTLLRVFDT TG+ L ELRRG+DRA V SI F+ ++ F+AC SD+GTVHIFSL  G
Sbjct:    1 CGTESGFRIYNVDPFKETFRRVFSGGGVGVVEMLFRCNLLALVGGGRSPRYPPNKVMIWDDHQNRCIGELSFRSDVKAVKLRRDRVVVVLATKVYVYRFSDLKLLDQINTQPNPRGLVALCPHPSNNVLACPGVNRGHVRVELYDARKSTIITAHESDLARLALSGDGALVATASDKGTLLRVFDTHTGAQLRELRRGVDRAAVYSIAFDAEAKFLACSSDKGTVHIFSLGDG 233

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig96.17554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5LNG1_9PHAE	1.210e-182	100.00	Reverse transcriptase domain-containing protein n=...	[more]
D7G3N5_ECTSI	4.670e-162	99.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835Z323_9STRA	2.320e-151	81.15	WD40-repeat-containing domain protein n=1 Tax=Trib...	[more]
A0A4D9CZG2_9STRA	3.310e-140	77.04	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
W7U6T1_9STRA	6.760e-139	76.65	Wd repeat domain phosphoinositide-interacting prot...	[more]
A0A067CH88_SAPPC	2.060e-131	71.60	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]
A0A485KXM0_9STRA	4.930e-131	71.48	Aste57867_13230 protein n=2 Tax=Aphanomyces TaxID=...	[more]
A0A7S3JWF9_9STRA	7.830e-127	71.08	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S2CPD6_9STRA	7.760e-126	71.60	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
F0Y5R4_AURAN	1.660e-123	76.82	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]

Pages

Properties


Property Name	Value
Start	1
Stop	0
Cds size	789
Model size	1305
Exons	5
Ec32 ortholog	Ec-00_006630.1
Ec32 ortholog description	WD40/YVTN repeat-like-containing domain
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko01001,ko03016
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	J
EggNOG OGs	KOG2111@1,KOG2111@2759
EggNOG free text desc.	phosphatidylinositol-3,5-bisphosphate binding
GOs	GO:0000045,GO:0000407,GO:0000422,GO:0001101,GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006497,GO:0006807,GO:0006914,GO:0006950,GO:0006952,GO:0006970,GO:0006979,GO:0006996,GO:0007005,GO:0007033,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009059,GO:0009414,GO:0009415,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009651,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0009991,GO:0010035,GO:0010150,GO:0010506,GO:0010508,GO:0016020,GO:0016043,GO:0016236,GO:0019222,GO:0019538,GO:0019898,GO:0022411,GO:0022607,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031667,GO:0032266,GO:0032501,GO:0032502,GO:0033036,GO:0034045,GO:0034497,GO:0034613,GO:0034645,GO:0035091,GO:0036211,GO:0042157,GO:0042158,GO:0042221,GO:0042594,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044804,GO:0048366,GO:0048367,GO:0048518,GO:0048522,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051179,GO:0051641,GO:0051704,GO:0051707,GO:0061726,GO:0061919,GO:0065007,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0080025,GO:0090693,GO:0098542,GO:0098805,GO:0099402,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901981,GO:1902936,GO:1903008,GO:1905037
KEGG ko	ko:K08876
Preferred name	WDR45B
Seed eggNOG ortholog	2880.D7G3N5
Seed ortholog evalue	7.1e-128
Seed ortholog score	463.4
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig96.17554.1	prot_E-siliculosus-1a_M_contig96.17554.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	polypeptide	E-siliculosus-1a_M_contig96 78197..82847 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622936527.7119815-UTR-E-siliculosus-1a_M_contig96:77682..78196	1622936527.7119815-UTR-E-siliculosus-1a_M_contig96:77682..78196	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig96 77683..78196 +
1696251117.6016526-UTR-E-siliculosus-1a_M_contig96:77682..78196	1696251117.6016526-UTR-E-siliculosus-1a_M_contig96:77682..78196	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig96 77683..78196 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622936527.722957-CDS-E-siliculosus-1a_M_contig96:78196..78266	1622936527.722957-CDS-E-siliculosus-1a_M_contig96:78196..78266	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 78197..78266 +
1696251117.6244605-CDS-E-siliculosus-1a_M_contig96:78196..78266	1696251117.6244605-CDS-E-siliculosus-1a_M_contig96:78196..78266	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 78197..78266 +
1622936527.733523-CDS-E-siliculosus-1a_M_contig96:79664..79840	1622936527.733523-CDS-E-siliculosus-1a_M_contig96:79664..79840	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 79665..79840 +
1696251117.637817-CDS-E-siliculosus-1a_M_contig96:79664..79840	1696251117.637817-CDS-E-siliculosus-1a_M_contig96:79664..79840	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 79665..79840 +
1622936527.7461102-CDS-E-siliculosus-1a_M_contig96:80642..80960	1622936527.7461102-CDS-E-siliculosus-1a_M_contig96:80642..80960	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 80643..80960 +
1696251117.6490946-CDS-E-siliculosus-1a_M_contig96:80642..80960	1696251117.6490946-CDS-E-siliculosus-1a_M_contig96:80642..80960	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 80643..80960 +
1622936527.7603412-CDS-E-siliculosus-1a_M_contig96:82008..82104	1622936527.7603412-CDS-E-siliculosus-1a_M_contig96:82008..82104	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 82009..82104 +
1696251117.6599433-CDS-E-siliculosus-1a_M_contig96:82008..82104	1696251117.6599433-CDS-E-siliculosus-1a_M_contig96:82008..82104	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 82009..82104 +
1622936527.986584-CDS-E-siliculosus-1a_M_contig96:82718..82847	1622936527.986584-CDS-E-siliculosus-1a_M_contig96:82718..82847	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 82719..82847 +
1696251117.6713636-CDS-E-siliculosus-1a_M_contig96:82718..82847	1696251117.6713636-CDS-E-siliculosus-1a_M_contig96:82718..82847	Ectocarpus siliculosus Ec864m_EcPH12_78m male	CDS	E-siliculosus-1a_M_contig96 82719..82847 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_M_contig96:77683..82847+
coding sequence from alignment at E-siliculosus-1a_M_contig96:77683..82847+

protein sequence of mRNA_E-siliculosus-1a_M_contig96.17554.1

>prot_E-siliculosus-1a_M_contig96.17554.1 ID=prot_E-siliculosus-1a_M_contig96.17554.1|Name=mRNA_E-siliculosus-1a_M_contig96.17554.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=263bp
MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVF
SNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFR
SEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCAD
ASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVAT
ASSRGTLLRVFDTDTGSLLHELRRGMDRAEVSSICFNQQSTFVACCSDRG
TVHIFSLEPGTSN

mRNA from alignment at E-siliculosus-1a_M_contig96:77683..82847+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_M_contig96.17554.1 ID=mRNA_E-siliculosus-1a_M_contig96.17554.1|Name=mRNA_E-siliculosus-1a_M_contig96.17554.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5165bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:77683..82847+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGCTGCCTGCTGCGCGCACACACACGTTGCTTCTCGTCCCTCTCACGCG
GTCTTCTCAGTTCCACCCGCCGCGCTACTACTAGCTTACACCCGGGCCGG
TTCGCCCTCTGCGTCCCGTCTCGTGTGCCGAGAGATTAATTAAATCCCTC
TCCTTCCTTTGTTACGAACTGGGCGACAATAGGCGACTGCAAGGACAGCA
AGAAGAACAAGAACGGACCTCTCCAGAGTACGAGCACGGCGAGGCAGCAA
AGCGAGGGAACTGCGTAGGGGCCAGAGTGGAGACAATTCGCAGACGTCTG
AGGTCTGATCCAGCTTGTGTCTGACTCCAGCGAAAGAGCCTGGACCCTAC
CGGCAGCAGCTAGAGCAGATTTGGCCGACGAATACCCTCTCTCACGAACA
TCAACTACAGACCGAGGGCGACCTGCGAACGGCAACACAGCAGGTTCACG
AGGCCCGGCGCGGAGCATCCGTGGCGTGCTCAATTAAGCACCCATCGAGG
GAGAGGCGCGCGAGATGTCTAGCATGAGCCTCAGCAACAACCAGAAGAAC
GAACTCCTGTTCGTGGGCTTCAACCAAGACTACGGTGAGTTGGCCTACTT
TTATTTATTCACGTCTTCCGTGATTTTGCCCGCCTTCATGTACGATTCCG
CTCGAAATGGCAAGAGAGCGTGCCAGGTGTCACCAAATCGAGAAATAGTG
TGAGTGCGTGGTATCATACATCATACACCACGGTGTTGGATCGCATCGAA
CTGAACCGCCACTGCGAATGTGTCAGTTGGCGACTCCGAGGAGGCAGTAG
TCGTTTTTTTTTTGGCCTCGCAATTCGCAGTCCATTTTGGAGACCGTGAA
GTACAAATTACGCTCGCGGCCGGCCTGTGGAGCAGTTCGAGTTTTAAATA
CTGCTGTGGACACACGCTTCGTAGATGCACCTTCCGGCGAGTATATCCTG
CGACGAATGCCCGCGGGTATAAAGACAGGCAGGGCTTTGTTGAAATCCGT
ATGACGCGTCACGCTATTTTGTTTCGAACAGGCCTTGCAGCCTAATTGCG
TGTTTCGTCCAGCTGCTTCTTCCCATGGAACGCCGAACCTTGGGCGTCAT
TCCGCCCGTTCCCACAGCACGGACACCATCTTTCTGCGTACTAGTAAAAG
GAGCACCGTTATACCGCCGGCGTAACCAGCGTGGCGATTTAGCTCCTGGG
GATGCACCCGCGTGGTTTTGCTTGCAAACGAGATGCTAAATCAAACATTG
CGTTCGCCGCATTGTCCGCCCGTTTTTGGACTTGGCTGGACCGCGTACGC
AGGATTTTAAGAGTATCTAGAAAAATAATAGGGAGGGGGCACGCAGACGC
TATCCCTAACCCTCAAAGCACGGATTGAATACTTTATCCCATATGTTTGC
TTAATCAATTTGCTACCTGACTTGACTTGACAAACAAGATCATGCCAGCA
ACTTCATGCCTTCTTTGTTTAGAATCCCGAAACATCGAGTTGTACAGCGG
TCGCCCTTGCTTTAGTTTGTTTTCCTTCGAAAGCGGTGATGGCATGGTAC
GCGATGAAACCCAGCCGGTTTCGCTTACGTAGAGCAGGCGTGTTTGGTTT
TGTGTCGACATCGGGCCTGAGCGAAACACGGTTTTACAAAAGCAACAACA
CCGACTGACCACCACCACGTGGTACACGTTACTGCTATGAAACCCTTTCG
ATTTCGGTAGAGCAGGCATGTTTGGTTTTGTGTCGATATCGGGCCTGAAC
GAAACACGGCTTTGTAACAACGAGGACATGAACGACAACAACAACAACAA
CAACAACAAAATGGCACACGATACTGCTATGAAACCCTTTCGATTTCGGT
AGAGCAGGCGTGTTTGGTTTTGTGTCGATGTCGGGCCTGAGGAAAACACG
GCTTTCTACAAACAACAACGTTCCACCGCCACCACCACCACAAACGCCAA
CGAGAACGAACGATATCCTGCTGCTGTGTCAGGGTGTTTCGCCTGCGGCA
CGGACAACGGCTTCCGCATCTACAACGTCGACCCGTTCCGAGAGACTTTC
CGCAGGGTTTTCAGCAATGGAGGCATCGGCATCGTCGAGATGTTGTTCCG
CTGCAATTTGTTGGCCCTGGTCGGAGGGGGAAGAAACCCACGATACCCTC
CCAACAAGGTGGGATCCCGGGGGGGGGGGGAGTAACTCACGTAAATTTGT
GCATTCCTAGTTGTTAGACCTTTGACCTCGCTTCCCGGGACGGAGCGATG
TTTCGCCGGGCCAGGCGACGTTTCACAAGGTATGAACTATGAACCAGACG
CTGGTCATCGTCCTTTGGGGCTGGGGAGACAGGGAAAGCTCCGAAGGCTC
GGACGAAAGAAGCGTGAATGGGAGGGGAAGGGGAGACGGTGTGGTGCATG
GCGAAATATGTGTGTATATGTTGGTACTGCTTTGCCGATCGGAACCGAAT
CGTGTCGCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGGC
GTTGAGGGCACGTACATGCAGCTGTGTTGGGACTTAGACGCAGCTGTGTT
GGGACTTTCCAAGCCTCCACACGCGCGCGACATCAGTCTGTGCGTTGTTT
ATGTGCCAAAGCACAACCGTGCTCGATGGTGGATATCCTCGTATGTATTT
CCCCCAACATGAGGGTACCGTTGCACGCAAGCAGTTTGCCCGCATCCGCC
ACGATGTCAATGAGACCGAAGTAAGCAGCAGGGGGCGGAGGCGGGGGGAG
GGGGTCCCAGCTCCCGCCTTTGCGCAAGGGAGAAGTTGAGTCATTTCTTC
TTCGATCTCTGTTTTTTTCCAACACCCTGTGGTGGCTCTTCAAACCCGTG
AGCGCTTTGACGGGATAACTATGCATCGACCATCGACGGTGTCTTCATCT
TTTGAGCACTCAACCCAATCGCACCGCCCCTCTCTCCTTCCCAATTTTTT
TTTTTGACAGGTGATGATCTGGGACGACCATCAGAGCCGCTGCATCGGCG
AGCTCAGCTTCCGCAGCGAGGTCAAGGCCGTCCGCCTTCGTCGCGACCGC
GTCGTCGTCGTACTCGCCCAGCGCATTTACGTCTACCGCTTCTCTGACCT
GCACCTGCTCGACCGCATCAACACCATCCGCAACGACCAGGGGCTGGTCG
CCCTCTGCGCGGACGCCTCCAACATGGTGCTCGCTTGCCCAGGGGTCAGC
CGCGGCCACGTCAACGTGGAGCTCTACGACCTGAGGCGGTCCACGCTGAT
CCCGGCCCACGAATCGGAGCTTGCCCAGGTGGGTTATGGGGTTTGGACCG
GCGTTTGTGTTTTTTTGGAGAGGGTGTGCTCATAATCTTGCATGCCGTAA
TCGTTAGACCATTGACCTCGCATCCCTGCAAAGCCGGGACAGAGCGACAT
GCCGGGTTTTCGCCGGCCCAGGCTACGTTTCACCAGCGTTTGCTGTACCA
AACCAGATATGCTAAGAGGGGAGGGGGGGCGGGGTACCCTTCATCATGCG
GTGCCGCAATCTTGGCTGAAATGATTTCGCGCTGGAGGGATAGGGGTCGG
GGGCGTCGTCGTCGTTTTCTTTGTGTCGTCTGCTCCGGTGTCTTGGTGGG
GCATATGTCGGCCATCGGACGAACTTGGAAGCGAGGGGGCTCCGGAGTGT
TGCGAGGGGGCGGTCTGGGATTTCGATGCTACTTTTGCTTGCTTGAGTTC
GAAAGGGTTTTGGCGGAGATGGTCGAGAATGTTCGCATATATTTTCCAGA
GAGTTTTTGTTTTGGCTGAAGCAGCAGCTTTTTGTTGTTGTCAGTTTGTT
GAAGGCCACACCATCCTCTTCGGGCCCAGGTTACTTGCCGCCCTCGATCT
CCCCGCTAGATCCCCGCAACTCTCGCTGCGTAGGCTTGATGTGTGGTACC
GTACACTAGACGCTTACACACGGCGAACATGCCGCCATTGGTACACGGTC
TTTCCTCCTGTGCCCACCATCCTCCGCGCCCCCTCCGCTACCCCGACGCC
GTGAAATCGAACTTGTGGTTTGAGTTTTTTTTGAAAGAGACCCACCCTAA
TGAAGATCTCACACATTTCCTCGTAGAAGATGTGCGTGCGCCTTTGTGTG
TGTTGTACTCTACATTGACTGTTTTGCTGTTTTTCCGCTCTCTCCTCTCG
CCCGCGGCGACGTAGGCGCGCGCTAGTCATTATGTTCCTCAGCGACGCAC
GTTAACCCCCCTCCCCCCCATACTGCTGTGCCCCCATTCATCGCGGCGCG
ATCGATATCTGGCTTGACGGCTTGTCATCCGGGGCTGATGAACCTGTCTC
TTGGGTTTTGGATTGTTTTTCTTCAGCTGGCTTTGAGCATGGATGGCAAG
ATGGTGGCTACGGCCTCAAGCCGCGGAACCCTCCTGAGGGTTTTCGACAC
AGACACTGGCTCTTTGTTGCACGTGAGTTGTTAATTCTTCTTGTTCGGCC
GGTTTCTTCCGTGCGCAGACGGCGCCCTTATTTTGTGTGTGTGTGTGTGT
GGATGCTTGTTTTATTCTACTGTGACGGTGGCATGACTGTCAGTCGCAGC
CGGACGCGACACAGGAATCGCGTGTCGATATGTTTTTTCTTTGGGGATGT
GTCTGTCGCGATACTTGCTATTCCTGCGATAACCGCGGTATTTACCATCA
GTCGCAGCCGGACGCAATGTAGGAAGAATGTTGTATGTATCTTGCCGCCG
TCAGCTGACCTGATGAAATAGGATACGCCACGCTCTGCGGGACAACAGAT
AGAAACGACTCCCTCCTTGTACCTCCTACCCGGGGTCCTGCGATGGGAGG
GGCGCCGAACGAACCTATGCGTGTGCTTCTCTTTTAGCATCGACCGCGTG
TTGTGATGAGAGAGAAGCAGAGAAAATGTTGGCAGTGTGTTTGTGCAACT
GGTATGCCATAGCGGCAGTGCCGCGTGTCGTGTGTGCTGCGCGGTGCTGT
TTGTGTGCCTAGCCTTCGGCTCCTCCTACGCTTTCGAACTCTCCCCCCAT
TTTCCCGCCCATCGCACCGCTCCGCTCGCTCCAAAGGAGCTACGGAGAGG
CATGGACCGCGCAGAGGTGAGCTCCATCTGCTTCAACCAGCAGAGCACCT
TCGTGGCTTGCTGCAGCGATCGCGGAACGGTCCACATTTTTTCCCTCGAG
CCTGGCACGAGCAAC

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig96:77683..82847+

>mRNA_E-siliculosus-1a_M_contig96.17554.1 ID=mRNA_E-siliculosus-1a_M_contig96.17554.1|Name=mRNA_E-siliculosus-1a_M_contig96.17554.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1578bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig96:77683..82847+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCTAGCATGAGCCTCAGCAACAACCAGAAGAACGAACTCCTGTTCGT
GGGCTTCAACCAAGACTACGATGTCTAGCATGAGCCTCAGCAACAACCAG
AAGAACGAACTCCTGTTCGTGGGCTTCAACCAAGACTACGGGTGTTTCGC
CTGCGGCACGGACAACGGCTTCCGCATCTACAACGTCGACCCGTTCCGAG
AGACTTTCCGCAGGGTTTTCAGCAATGGAGGCATCGGCATCGTCGAGATG
TTGTTCCGCTGCAATTTGTTGGCCCTGGTCGGAGGGGGAAGAAACCCACG
ATACCCTCCCAACAAGGGTGTTTCGCCTGCGGCACGGACAACGGCTTCCG
CATCTACAACGTCGACCCGTTCCGAGAGACTTTCCGCAGGGTTTTCAGCA
ATGGAGGCATCGGCATCGTCGAGATGTTGTTCCGCTGCAATTTGTTGGCC
CTGGTCGGAGGGGGAAGAAACCCACGATACCCTCCCAACAAGGTGATGAT
CTGGGACGACCATCAGAGCCGCTGCATCGGCGAGCTCAGCTTCCGCAGCG
AGGTCAAGGCCGTCCGCCTTCGTCGCGACCGCGTCGTCGTCGTACTCGCC
CAGCGCATTTACGTCTACCGCTTCTCTGACCTGCACCTGCTCGACCGCAT
CAACACCATCCGCAACGACCAGGGGCTGGTCGCCCTCTGCGCGGACGCCT
CCAACATGGTGCTCGCTTGCCCAGGGGTCAGCCGCGGCCACGTCAACGTG
GAGCTCTACGACCTGAGGCGGTCCACGCTGATCCCGGCCCACGAATCGGA
GCTTGCCCAGGTGATGATCTGGGACGACCATCAGAGCCGCTGCATCGGCG
AGCTCAGCTTCCGCAGCGAGGTCAAGGCCGTCCGCCTTCGTCGCGACCGC
GTCGTCGTCGTACTCGCCCAGCGCATTTACGTCTACCGCTTCTCTGACCT
GCACCTGCTCGACCGCATCAACACCATCCGCAACGACCAGGGGCTGGTCG
CCCTCTGCGCGGACGCCTCCAACATGGTGCTCGCTTGCCCAGGGGTCAGC
CGCGGCCACGTCAACGTGGAGCTCTACGACCTGAGGCGGTCCACGCTGAT
CCCGGCCCACGAATCGGAGCTTGCCCAGCTGGCTTTGAGCATGGATGGCA
AGATGGTGGCTACGGCCTCAAGCCGCGGAACCCTCCTGAGGGTTTTCGAC
ACAGACACTGGCTCTTTGTTGCACCTGGCTTTGAGCATGGATGGCAAGAT
GGTGGCTACGGCCTCAAGCCGCGGAACCCTCCTGAGGGTTTTCGACACAG
ACACTGGCTCTTTGTTGCACGAGCTACGGAGAGGCATGGACCGCGCAGAG
GTGAGCTCCATCTGCTTCAACCAGCAGAGCACCTTCGTGGCTTGCTGCAG
CGATCGCGGAACGGTCCACATTTTTTCCCTCGAGCCTGGCACGAGCAACG
AGCTACGGAGAGGCATGGACCGCGCAGAGGTGAGCTCCATCTGCTTCAAC
CAGCAGAGCACCTTCGTGGCTTGCTGCAGCGATCGCGGAACGGTCCACAT
TTTTTCCCTCGAGCCTGGCACGAGCAAC