mRNA_E-siliculosus-1a_M_contig95.17541.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: D7G1Y4_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y4_ECTSI) HSP 1 Score: 473 bits (1218), Expect = 1.370e-157 Identity = 235/243 (96.71%), Postives = 236/243 (97.12%), Query Frame = 2 Query: 500 NQILGWKLLTTFRVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSGRADDHAEAAQVRIDTYHQQSSGPSRYFESIGLKCVDLDGTLSVRENTQYLLNLPMLSSICYRHVHEARSKPNAPPSEKPERSFDPAVRESGAPQLGVRSPIPPT 1228
+ ILGWKLLTTFRVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLT HPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSGRADDHA AAQVRIDTYHQQSSGPSRYFESIGLKCVDLDGTLSVRENTQYLLNLPMLSSICYRHVHEARSKPNAPPSEKP R FDPAVRESGA QLGV SPIPPT
Sbjct: 237 HTILGWKLLTTFRVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTLHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSGRADDHAGAAQVRIDTYHQQSSGPSRYFESIGLKCVDLDGTLSVRENTQYLLNLPMLSSICYRHVHEARSKPNAPPSEKPGRYFDPAVRESGASQLGVGSPIPPT 479
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: A0A7S1YIY5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIY5_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.370e-42 Identity = 85/209 (40.67%), Postives = 125/209 (59.81%), Query Frame = 2 Query: 500 NQILGWKLLTTFRVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSGRADDHAEAAQVRIDTYHQQSSGPSRYFESIGLKCVDLDGTLSVRENTQYLLNLPMLSSICYRHVHEARSK 1126
N+ILG R++ V+GGP SGKG + + + + VH+SSGDLLRDEV++ TPLG +VA+ M+ G LV ++ ++ L+ + + HPGK VLLDGFPRSL+NA D + G PE + ++C D ++ RI+ RGK RADD+ E A +R+ TYH+ + G+ V+LD + S LL + L +H +RSK
Sbjct: 9 NEILGGS---PARIVLVVGGPGSGKGLLSKRLEEECSVVHLSSGDLLRDEVRKGTPLGQEVAQIMQRGELVSSAIIVTLIRRRMRDHPGKRVLLDGFPRSLENAHDLMEICGKPELALHLSCDDTILMERILRRGKEGNRADDNVETALLRLRTYHKYHHTQMEWLREQGVPVVNLDCSGSPENVWHQLLAIGRLMRPAAQH---SRSK 211
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: A0A7S2RDR3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RDR3_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.450e-42 Identity = 82/190 (43.16%), Postives = 119/190 (62.63%), Query Frame = 2 Query: 515 WKLLTTFRVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGK----GSGRADDHAEAAQVRIDTYHQQSSGPSRYFESIGLKCVDLDGTLSVRENTQYLLN 1072
W+L + FR I+++GGPA GKGT+CA + + A H+S G++LR+EVQ QTPLG ++ + G LV+ + VLALL + HPG VLLDGFPRS NA D+ + G P + + CP + M +RI++RG+ G R+DD+ E A+ RI+T+++Q Y E I + + LD T S E Q LL+
Sbjct: 214 WRLRSAFRTIYIVGGPACGKGTLCARIAEHAQIQHISCGEILREEVQAQTPLGKEIEAIIARGELVEPAVVLALLRVRMAEHPGCIVLLDGFPRSQQNAEDFNAMVGKPSLVVYLECPPDTMVNRIIKRGEQSAPGEKRSDDNIETARNRIETFNKQGKPTLEYLEKIDIPVLHLDATKSPDEVWQQLLD 403
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: A0A7S4I305_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I305_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.160e-40 Identity = 78/188 (41.49%), Postives = 124/188 (65.96%), Query Frame = 2 Query: 509 LGWKLLTTFRVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSGRADDHAEAAQVRIDTYHQQSSGPSRYFESIGLKCVDLDGTLSVRENTQYLLN 1072
+GW+L + FR V+GGP SGKGT+C + +RA H SSGD+LR+E++ +PL ++ M++G LV ++T++ALL+K L R+PG + LDGFPRS++N +D+ + G PE + ++ PD+VM RI++R + SGRADD+ + A R++T+H+ + E G+ LDGT S + + LL+
Sbjct: 241 IGWRLRSGFRAFLVLGGPGSGKGTLCDIMARRAGIKHCSSGDVLREELESGSPLASEIGVTMEKGELVPSTTIIALLKKRLCRYPGSLLALDGFPRSVENYQDFDDVCGRPEFAVSVDVPDDVMIERILKRAETSGRADDNIDTATRRLETFHELTKPTLFQLERDGVPVYKLDGTRSPEDIWEELLD 428
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: B8CC71_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC71_THAPS) HSP 1 Score: 151 bits (382), Expect = 8.060e-39 Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = 2 Query: 539 VIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSGRADDHAEAAQVRIDTYHQ 970
+I V+GGP SGKG + +VK VH+SSGDLLR+EVQ + LG QV E MK G LV ++ ++AL++K + HPGK +LLDGFPRS +NARD L G PE + ++C D ++ RI+ RGK RADD+ A RI YH+
Sbjct: 1 IILVVGGPGSGKGLLSERLVKECGVVHISSGDLLREEVQAGSHLGKQVEEIMKSGGLVSSAIMVALMQKRMKDHPGKRILLDGFPRSAENARDLVTLCGKPELALHLDCDDTILIERILHRGKSGARADDNITTALQRIRNYHK 144
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: B8C8Q3_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8Q3_THAPS) HSP 1 Score: 150 bits (378), Expect = 1.230e-38 Identity = 70/143 (48.95%), Postives = 100/143 (69.93%), Query Frame = 2 Query: 539 VIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSGRADDHAEAAQVRIDTYH 967
V+ V+GGP SGKG +C + K AVH+S G++LR+EV+ +TPLG++VAE M+ G LV ++ V AL+ + + +HPG+ +LLDGFPRSL+NARD+ L GPPE + ++C D V+ RI+ R S RADD+ A R+ YH
Sbjct: 1 VVLVVGGPGSGKGALCERLEKECGAVHLSCGEMLREEVEARTPLGIEVAEIMERGELVSSAVVTALMRRRMRQHPGRRILLDGFPRSLENARDFVELCGPPELALHLDCDDCVLLERILARV--SVRADDNIHTAIQRLKNYH 141
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: A0A1Z5JJ07_FISSO (Adenylate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ07_FISSO) HSP 1 Score: 155 bits (391), Expect = 2.330e-38 Identity = 76/167 (45.51%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 536 RVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGS--GRADDHAEAAQVRIDTYHQQSSGPSRYFESIGLKCVDLD 1030
R+I V+GGP SGKG +C+ + VH+SSGDLLR+EV+RQ+PLG +V + M G LV ++ ++ L++K + H GK VLLDGFPRS++NARD RL G PE + ++C D VM RI+ERG S R DD+ + A RI T+H+ + + V+LD
Sbjct: 111 RIIIVVGGPGSGKGLLCSRLAAECGVVHLSSGDLLRNEVERQSPLGREVKDIMARGELVSSAIIVTLMKKHMGAHSGKRVLLDGFPRSVENARDLTRLCGVPELALHLDCEDTVMLERIMERGSASVVRRQDDNFQTAIRRIRTFHKYHKATMEWLHEQHVPVVNLD 277
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: A0A7S4R1Y4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R1Y4_9STRA) HSP 1 Score: 152 bits (383), Expect = 7.030e-38 Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = 2 Query: 536 RVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSG---RADDHAEAAQVRIDTYHQ 970
R+I V+GGP SGKG + +VK +H+SSGDLLRDEV + T LG QV E MK G LV + ++AL++K + +HPGK +LLDGFPRS +NA+D L G PE + ++C D ++ RI+ RG SG RADD+ A RI YH+
Sbjct: 56 RIILVVGGPGSGKGLLSERLVKECGVIHISSGDLLRDEVAKGTTLGKQVDEIMKSGGLVSSGIMVALMQKKMKKHPGKRILLDGFPRSTENAQDLVTLCGKPELALHLDCDDTILIERILNRGLSSGSSARADDNIHTALTRIRNYHK 203
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: A0A0M0JZG9_9EUKA (Adenylate kinase 1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZG9_9EUKA) HSP 1 Score: 148 bits (374), Expect = 1.720e-37 Identity = 72/165 (43.64%), Postives = 99/165 (60.00%), Query Frame = 2 Query: 536 RVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGKGSGRADDHAEAAQVRIDTYHQQSSGPSRYFESIGLKCVDLD 1030
R I ++GGP SGKG +C +V HVS GD+LR EVQ TPLG +V+ M+ G LV + ++ LL + + PGK +LLDGFPRS NA+D+ G PE + + C DE M RI+ RG+ RADD+ E A R+ YH S+ + E+ G+ V+LD
Sbjct: 9 RCILIVGGPGSGKGRLCERLVAHCGVSHVSCGDMLRQEVQADTPLGREVSGIMQRGELVSSDLIVTLLRRRMRAFPGKRLLLDGFPRSEQNAKDFESQCGVPELALHLKCTDEKMVERILRRGQLENRADDNPETAARRLRVYHDSSAPTLAWLEARGVPIVELD 173
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Match: A0A7S0KAC2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KAC2_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.570e-37 Identity = 70/169 (41.42%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 536 RVIFVMGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEGRLVDASTVLALLEKFLTRHPGKHVLLDGFPRSLDNARDWARLFGPPEACIRINCPDEVMASRIVERGK----GSGRADDHAEAAQVRIDTYHQQSSGPSRYFESIGLKCVDLD 1030
R++ V+GGP SGKG +C + + NAVH+SSG++LR+E+++ TPLG++V + ++ G LV ++ + AL+ + + +PG+ VLLDGFPRSL+NARD+A L G PE + +NC D ++ RI+ R K GR+DD+ E A R+ YH+ + + V+LD
Sbjct: 158 RIVLVVGGPGSGKGILCDRMAQECNAVHLSSGEMLREEIKKGTPLGMEVKDIIERGELVSSALMTALIRRRMRDYPGRRVLLDGFPRSLENARDFADLIGKPELALHLNCDDTILMERILMRAKEQSENGGRSDDNIETALRRLRNYHKAQKPTMDWLREQHIPIVNLD 326 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17541.1 >prot_E-siliculosus-1a_M_contig95.17541.1 ID=prot_E-siliculosus-1a_M_contig95.17541.1|Name=mRNA_E-siliculosus-1a_M_contig95.17541.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=242bp MGGPASGKGTICAEVVKRANAVHVSSGDLLRDEVQRQTPLGLQVAERMKEback to top mRNA from alignment at E-siliculosus-1a_M_contig95:644848..649065- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17541.1 ID=mRNA_E-siliculosus-1a_M_contig95.17541.1|Name=mRNA_E-siliculosus-1a_M_contig95.17541.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4218bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:644848..649065- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:644848..649065- >mRNA_E-siliculosus-1a_M_contig95.17541.1 ID=mRNA_E-siliculosus-1a_M_contig95.17541.1|Name=mRNA_E-siliculosus-1a_M_contig95.17541.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1452bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:644848..649065- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |