mRNA_E-siliculosus-1a_M_contig95.17540.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: D7G1Y3_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y3_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 2.140e-150 Identity = 375/460 (81.52%), Postives = 379/460 (82.39%), Query Frame = 2 Query: 440 MPSVAPPKQSPRGNRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLARTTPAGNFPXXXXXXXXXXXXXXXXXIQQLGIEKIGAAGGLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLAGFSDTPLCRTIRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRATSWVWPSSAAASVAQDAAEVRAGAETEPTRLTSTLKILRRRATRRGVLLRALSRYSSSETDVPCEPSRGIFS 1819 MPSVAPPKQSPRGNRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLD GADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLARTTPAGNFP XXXXXXXXXXXXXXXX +QLGIEK GAAGGLEALRLAAK+G PLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGL GFSDTPLCRTIRILRDVETEGKDD EEQLGRLEAVRRLLLRVEAV ATSWVWPSSAA SVAQDAAEV+AGAETEPTRLTSTL+ILRRRATRRGVLLRALSRYSSSETDV CEPSRGIFS Sbjct: 1 MPSVAPPKQSPRGNRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDVGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLARTTPAGNFPPXXXXXXXXXXXXXXXXXRQLGIEKFGAAGGLEALRLAAKEGP-----------------------------------------------------------------------PLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLVGFSDTPLCRTIRILRDVETEGKDDKEEQLGRLEAVRRLLLRVEAVHATSWVWPSSAAGSVAQDAAEVKAGAETEPTRLTSTLQILRRRATRRGVLLRALSRYSSSETDVACEPSRGIFS 389
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 181 bits (458), Expect = 2.300e-46 Identity = 219/442 (49.55%), Postives = 260/442 (58.82%), Query Frame = 2 Query: 461 KQSPRGNRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLARTTPAGNFPXXXXXXXXXXXXXXXXXIQQLGIEKIGAA-GGLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLAGFSDTPLCRTIRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRATSWVW----PSSAAASVAQDAAEVRAGAETEPTRLTSTLKILRRRATRRGVLLRALSRYS 1771 +QSPR N+LH+AA + A+L GS+DID GD G TPLM A H V +LL GA S + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+PLL R A +Q+ GI G GG+ AL+LAA H+DVM+ LT AGVVDTG+AL A + G VKFLLQ E+ AYV+ RDP GRTPL+ +ID+G+ + C P++VRLLVD+GADT S VR+T + G TPL LR K +E L RLE +RRLLLRVEAV ATSW+W P + A E + + T P +L + L ILRRRA RG + +L RY+ Sbjct: 8 QQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPS------------EKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAP-QLRTVLPILRRRARGRGFVSASLCRYA 436
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 162 bits (411), Expect = 5.610e-40 Identity = 228/447 (51.01%), Postives = 278/447 (62.19%), Query Frame = 2 Query: 458 PKQSPRGNRNELHDAADNDLIAEVLALLRG-GSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLARTTPAG-NFPXXXXXXXXXXXXXXXXXIQQLGIEKIGA-AGGLEALRLAAKDGHVDVMVVLTEAG-VVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYT-YRDGLAGFSDTPLCRTIRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRATSWVWPSSAAASVAQDAAEVRAGAETEPTRLTSTLK----ILRRRATRRGVLLRALSRYS 1771 P+Q RG N LH AA + + A+L G+ DID G+P T LM AT +G++ V LL GA+ S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+PLL TP G ++ I+Q+GI G +GG+EALR AA + H++ M VL +AG VVDTG AL AA G +VKFLL+ + AYVN RDP GRTP++ ++D+G +LC P+IVRLLVD+GA+T AV T S+TPL T R+LR+ +G+ +EQL RL+ R LL R EAV A SW+W S +AQ A + + ET T + + L+ +LRR+ RGVLL+ L RYS Sbjct: 4 PQQVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQA---------------DADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKT--ETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYS 433
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 159 bits (401), Expect = 1.350e-38 Identity = 236/472 (50.00%), Postives = 278/472 (58.90%), Query Frame = 2 Query: 440 MPSVAPPKQSPRGNRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLARTTPAGNFPXXXXXXXXXXXXXXXXXIQQLGIEKIGA-AGGLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLAGFSDTPLCRTIRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRATSWVWPSSAAASVAQDAAEVRAGAETEPTRLTSTLK----ILRRRATRRGVLLRALSRYSSSETDVPCEPSRGIFS*RGRRFH 1840 M +V+ + PRG N+LH AA + V ALL GSVDI+QG+P GWTPLM AT +GHS + LL+ GA+ S+ G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IQQLG+ G + G+E+LRLAA + +VD+M +LT GVVDTG AL AA E SVKFLLQ YVNN DP GRTPL+ +I+ PRI R L+D GADT+S V T DTPL R LR + GK+ EEQL L+A+ RLL ++EAV A SW+W SS A A + +PT TLK +LR +RGV+LRA+ Y ++E V RG R+H Sbjct: 19 MLAVSTSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQH---------------------GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTW---------------YVNNTLDPFGRTPLVCTIEA--CGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSS---DTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAV--YRAAEELV-----------RGARWH 436
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 158 bits (400), Expect = 1.490e-38 Identity = 229/439 (52.16%), Postives = 267/439 (60.82%), Query Frame = 2 Query: 473 RGNRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLARTTPAGN-FPXXXXXXXXXXXXXXXXXIQQLGIEKI-GAAGGLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLAGFSD-TPLCRTIRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRATSWVWPSSAAASVAQDAAEVRAGAETEPTR---LTSTLKILRRRATRRGVLLRALSRYS 1771 RG RNELH AA + +LL GG +DIDQGDP GWTPLMFA +GHS ++VLL+ GA V ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PLL +GN F +Q+ GI GA+ G++AL AA D H+DVM +L +AGVVDTG AL LG E ++KFLL+ R Y + RD G TPLL ++ G C PR+VRLLVD+GAD AVR DG + TPL R L + + +QL L A RRLLL+VE V ATSW+W A AA + A+TE T L S L I+ RR+ RRG L + R + Sbjct: 9 RGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTA-------------RTTYASTPRDGRGHTPLLSAVTTGP---CSPRVVRLLVDAGADATLAVRVP--DGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCP----AAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLA 425
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 154 bits (390), Expect = 3.810e-37 Identity = 195/451 (43.24%), Postives = 246/451 (54.55%), Query Frame = 2 Query: 440 MPSVAPPKQSPRGNRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NADPLLARTT-PAGN-FPXXXXXXXXXXXXXXXXXIQQLGIEKIG-AAGGLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLAGFSDTPLCRTIRILRD-VETEGKDD-NEEQLGRLEAVRRLLLRVEAVRATSWVWPSSAAASVAQDAAEVRAGAETEPTRLTSTLKILRRRATRRGVLLRALSRYSS 1774 MP V P+Q PRG N LH AA+ +L G+ DIDQG+ +GWT LM A+ G++R V ++L+ GA S+ XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX ADPLL P+G F I+Q+GI+ G ++GG+ AL+ AA+ ++++MV+LT AGVVDTG+AL AA G E +KFLL+ + AYVN RD G TPLL I + PR+VRLLV++GADT S V + G S TPL T+ +RD V+ G+ + EQL +LEA+RRLLLRVEAV A SW+WPS + ++ + AA T +T + + RRRA R V L AL RYSS Sbjct: 1 MPRVPRPQQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTM-----------DEAAYVNT-RDRGGVTPLLWGI-----QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDIS-TITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSS 433
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 155 bits (391), Expect = 1.280e-36 Identity = 159/442 (35.97%), Postives = 202/442 (45.70%), Query Frame = 2 Query: 485 NELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NADPLLARTTPAGNFPXXXXXXXXXXXXXXXXX--IQQLGIEKIGA-AGGLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCF---PRIVRLLVDSGADTESAVRYTYRDGLAGFSDTPLCRT-IRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRATSWVWPSSAAASVAQDAAEVRAGAETEPTRLTSTLK----ILRRRATRRGVLLRALSRYS 1771 N+LH A A+L GG+V+IDQ + +G TPLM A GHSR ++L+ GA+ S+ + XXXXXXXXXXXXX NA+PLL +T+P GN IQ+LGIE A + G AL AA + H+D+M +LTEAGVVDTG AL AA +G EASVKFLL+ AY+N ARD G TPL + + CF PRIVR+LVD+GADT S V+ G F+DTPL T +R+ + + +GK +E L RLEA+ RLLLRV+AV A SW+WPS A + ET+P LK IL+RR RR L+ L RYS Sbjct: 107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEG----------AYLN-ARDVNGYTPL-----VVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPF--------IGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYS 524
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 154 bits (388), Expect = 2.350e-36 Identity = 239/449 (53.23%), Postives = 278/449 (61.92%), Query Frame = 2 Query: 440 MPSVAPPKQSPRGNRNELHDAADNDLIAEVLALLRGGS-VDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLARTTPAGN---FPXXXXXXXXXXXXXXXXXIQQLGIEKIGAAG-GLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLAGFSDTPLCRTIRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRATSWVWPSSAAASVAQDAAEVRAGAETEPTRLTSTLKILRRRATRRGVLLRALSRYS 1771 MP P + PRG NELH AA + LALL +D++QGD G TPLM AT GH R VR+LL+ GA+ S++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLL P+ F XXXXX +Q+LGIE+ G G++AL LA HV ++ +L AGVVD G ALA AAA G EASVKFLL+ R AYVN + G TPLL +I G C RIVRLLVD+GADT +A R T + G A + T L +L +E + K D E+ L+A RLLL+VEA A SWVWP+ + + + RA A P RLT L + RR R LL A+SRYS Sbjct: 1 MPPPPPTQGWPRGPMNELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSA-----------SRSAYVNKL-NRFGLTPLLENITCGH---CSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLL--LEKKAKGDTGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRRQRRAEA---PVRLT--LPMTRRDTGTRRALLGAVSRYS 427
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 145 bits (366), Expect = 4.410e-34 Identity = 185/384 (48.18%), Postives = 224/384 (58.33%), Query Frame = 2 Query: 470 PRGNRNELHDAADNDLIAEVLALLRG-GSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NADPLLARTTPAG-NFPXXXXXXXXXXXXXXXXXIQQLGIEKIG-AAGGLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKL-CFPRIVRLLVDSGADTESAVRYTYRDGLAGFSDTPLCRTIRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRAT 1606 PRG +N+LH AA++ + V+ALL S+ ID G +GWTPLM A +G SR VR+LL+ GA+ S+V E+ XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+PLL + TP+G F I+Q+ I+ G A+GG+ ALRLAA +VDVM VL +AGV+DTG AL TAA EA VK LLQ E YVN+ D +GRTPLL SID G+ C PR+VRLLVD+GADT SAV G G S TP+ L + GK E+ + +L A+ RL +VEA R++ Sbjct: 12 PRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGG----------ELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEAERSS 385
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 134 bits (338), Expect = 2.230e-30 Identity = 210/381 (55.12%), Postives = 240/381 (62.99%), Query Frame = 2 Query: 494 HDAADNDLIAEVLALLRGGSVDIDQGDPHGWTPLMFATAQGHSRTVRVLLDAGADASMVGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLART-TPAG-NFPXXXXXXXXXXXXXXXXXIQQLGIEKIGA-AGGLEALRLAAKDGHVDVMVVLTEAGVVDTGVALATAAALGTEASVKFLLQXXXXXXXXXXXXXXXXXXXERRAYVNNARDPLGRTPLLGSIDIGIIKLCFPRIVRLLVDSGADTESAVRYTYRDGLAGFSDTPLCRTIRILRDVETEGKDDNEEQLGRLEAVRRLLLRVEAVRATSWVWPSS 1627 H +AD V ALL GSVDI+QG+P GWTPLM A +G SR + LL GA+ S+VG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+ LLA P+G F QLG+ G +GG+E+LRLA + VD+M +LT GVVDTG AL AA E SVKFLLQ YVNN DP GRTPL+ +I+ PRI R L+D+ ADT+S V T DTPL LR + K+ EEQL L+A+ RLL +V+AV A SW+W SS Sbjct: 9 HGSADR-----VDALLSMGSVDINQGNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAW---------------YVNNTLDPFGRTPLVCTIEA--CGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSS 367 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17540.1 >prot_E-siliculosus-1a_M_contig95.17540.1 ID=prot_E-siliculosus-1a_M_contig95.17540.1|Name=mRNA_E-siliculosus-1a_M_contig95.17540.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=461bp MPSVAPPKQSPRGNRNELHDAADNDLIAEVLALLRGGSVDIDQGDPHGWTback to top mRNA from alignment at E-siliculosus-1a_M_contig95:640754..643829+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17540.1 ID=mRNA_E-siliculosus-1a_M_contig95.17540.1|Name=mRNA_E-siliculosus-1a_M_contig95.17540.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3076bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:640754..643829+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:640754..643829+ >mRNA_E-siliculosus-1a_M_contig95.17540.1 ID=mRNA_E-siliculosus-1a_M_contig95.17540.1|Name=mRNA_E-siliculosus-1a_M_contig95.17540.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2766bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:640754..643829+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |