Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 582 |
| Model size | 891 |
| Exons | 2 |
| Ec32 ortholog | Ec-07_003780.1 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936522.6925478-UTR-E-siliculosus-1a_M_contig95:572057..572261 | 1622936522.6925478-UTR-E-siliculosus-1a_M_contig95:572057..572261 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 572058..572261 - |
| 1696251115.705834-UTR-E-siliculosus-1a_M_contig95:572057..572261 | 1696251115.705834-UTR-E-siliculosus-1a_M_contig95:572057..572261 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 572058..572261 - |
| 1622936522.812872-UTR-E-siliculosus-1a_M_contig95:573513..573618 | 1622936522.812872-UTR-E-siliculosus-1a_M_contig95:573513..573618 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 573514..573618 - |
| 1696251115.7469456-UTR-E-siliculosus-1a_M_contig95:573513..573618 | 1696251115.7469456-UTR-E-siliculosus-1a_M_contig95:573513..573618 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig95 573514..573618 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936522.7169018-CDS-E-siliculosus-1a_M_contig95:572261..572642 | 1622936522.7169018-CDS-E-siliculosus-1a_M_contig95:572261..572642 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 572262..572642 - |
| 1696251115.7160914-CDS-E-siliculosus-1a_M_contig95:572261..572642 | 1696251115.7160914-CDS-E-siliculosus-1a_M_contig95:572261..572642 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 572262..572642 - |
| 1622936522.7938304-CDS-E-siliculosus-1a_M_contig95:573312..573513 | 1622936522.7938304-CDS-E-siliculosus-1a_M_contig95:573312..573513 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 573313..573513 - |
| 1696251115.7330148-CDS-E-siliculosus-1a_M_contig95:573312..573513 | 1696251115.7330148-CDS-E-siliculosus-1a_M_contig95:573312..573513 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig95 573313..573513 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17530.1 >prot_E-siliculosus-1a_M_contig95.17530.1 ID=prot_E-siliculosus-1a_M_contig95.17530.1|Name=mRNA_E-siliculosus-1a_M_contig95.17530.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=194bp
MCKIVANKPTASCTPHGKSLRQARLEVLSRNTPREHLPSGEKEQRVAVNS
RQAAMSVSDRSSFRVSQRPQRDGNGCKWQQERGRREAASGRPTKTGKRLG
TIDSTLLTAVADSNHRGGHSSVPNKARSTGGGREPAKRDRRSKETMARVA
EECKRKAVERARKKKRRNRPERRAAAKAIVEYFDLLPFSTNAQ* back to topmRNA from alignment at E-siliculosus-1a_M_contig95:572058..573618- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig95.17530.1 ID=mRNA_E-siliculosus-1a_M_contig95.17530.1|Name=mRNA_E-siliculosus-1a_M_contig95.17530.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1561bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:572058..573618- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTGGCGATCCTGCTCCTCCTGTCTCTCTCTTCGATCCTGAGGCTACGTTG
TAGTGGCGATGGATCGTGGAAATGACGCGGAAACCGAGAATAAGCTCGGC
GAACAATGTGCAAGATCGTCGCGAACAAACCAACGGCGAGTTGTACGCCG
CACGGAAAAAGCCTACGACAAGCCCGGTTAGAGGTCTTGTCGAGAAACAC
GCCGCGTGAGCACCTACCATCGGGAGAGAAGGAGCAACGTGTGGCAGTCA
ACTCCAGGCAGGCCGCCATGAGCGTCAGCGACCGCAGCAGTTTTCGCGTG
TCTCAGGTGAAGAAACAAGGCGGGCGGGCACCGTATGTACCGGGGGTGAC
ACAAGATGCCACACACCCCGGGACCTATTTTCAGAGCTCGATTGCTCCAC
AGCAGAAGGGAGGGTGGCGGTGCCAAAAATGATGGTGATGGAATCGCCTC
GTCCAGATCTCCCAAAAACATGTCATTTGAGTTATATCCTCTTGTTCGTG
GAGTACTCGAAGTTTGCTTGAAAATCGGTCCGGGGTGTGTGGTATCTTAC
GTCATGTGACCTACGGTACGGCAGTCTACAGTTTATTGTCCTGGTGGGTG
GTGATGCAGTGGGGCTTGGGGAGATGTATGCACAGCCGAAGTAGAAGGTT
GCCTAGAGCTGTGTTGTTGTTTCCTGATACGTAGCTCCTTCGCTCGGCGG
TCGGTTCCAACGTTCACTCGGCACAGCATGCGGACCCGCAGCTAGACGAA
CGGTTTGGCAAAATCTGAATAATTTTGAATGTCGCCGCAAGTGCAAGAAA
ATGGTTAGGTCTCGACGTAATCAAGACACAGCTCACTCGAGGATCCCATA
TTATATTGTCCGGTGTATTTATAGTCACCTGCACTCAATCAACTGCGGTC
GTGATGAAAGAGTAAGAAACCGAGCCTCCACCCGACATGGACGTTTTCTC
TCGCCCGGCCCCTGCTGTTTGTACAGCGGCCGCAGCGCGATGGGAATGGA
TGCAAATGGCAGCAAGAAAGAGGGAGAAGGGAGGCAGCAAGCGGCCGACC
CACAAAGACAGGAAAACGCCTAGGAACAATCGATTCGACGCTACTAACAG
CAGTAGCAGACAGCAACCACCGCGGTGGGCATTCGTCTGTCCCCAACAAA
GCTAGGTCTACGGGCGGAGGTCGAGAGCCGGCCAAAAGGGACCGGCGGAG
CAAAGAGACAATGGCGAGAGTGGCCGAAGAATGCAAGCGGAAAGCCGTCG
AGCGTGCCAGGAAGAAAAAGAGGAGGAACCGCCCGGAACGCCGGGCGGCG
GCAAAAGCCATCGTTGAATACTTCGATTTGCTGCCTTTCTCGACGAACGC
GCAGTAGCACTAGCTTGGTGTGACGAGATTAAGCTGTGTGTAGGTTGCGG
CTCCGTTTCAGCCCGGTTCCTTTTCGTTATCCTCCTTTCTCTGTCAGTCG
CTCGCTACCGCTCACTCCCAAGCGACACTGAGTGAGCAAGAAGGAACGTC
AACACTGCTTGTACTGTTAGTAACAACCGTTGTTCCACTGTTTGTATGTA
TGAGCTCGGAA back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:572058..573618- >mRNA_E-siliculosus-1a_M_contig95.17530.1 ID=mRNA_E-siliculosus-1a_M_contig95.17530.1|Name=mRNA_E-siliculosus-1a_M_contig95.17530.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1164bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:572058..573618- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTGCAAGATCGTCGCGAACAAACCAACGGCGAGTTGTACGCCGCACGG
AAAAAGCCTACGACAAGCCCGGTTAGAGGTCTTGTCGAGAAACACGCCGC
GTGAGCACCTACCATCGGGAGAGAAGGAGCAACGTGTGGCAGTCAACTCC
AGGCAGGCCGCCATGAGCGTCAGCGACCGCAGCAGTTTTCGCGTGTCTCA
GATGTGCAAGATCGTCGCGAACAAACCAACGGCGAGTTGTACGCCGCACG
GAAAAAGCCTACGACAAGCCCGGTTAGAGGTCTTGTCGAGAAACACGCCG
CGTGAGCACCTACCATCGGGAGAGAAGGAGCAACGTGTGGCAGTCAACTC
CAGGCAGGCCGCCATGAGCGTCAGCGACCGCAGCAGTTTTCGCGTGTCTC
AGCGGCCGCAGCGCGATGGGAATGGATGCAAATGGCAGCAAGAAAGAGGG
AGAAGGGAGGCAGCAAGCGGCCGACCCACAAAGACAGGAAAACGCCTAGG
AACAATCGATTCGACGCTACTAACAGCAGTAGCAGACAGCAACCACCGCG
GTGGGCATTCGTCTGTCCCCAACAAAGCTAGGTCTACGGGCGGAGGTCGA
GAGCCGGCCAAAAGGGACCGGCGGAGCAAAGAGACAATGGCGAGAGTGGC
CGAAGAATGCAAGCGGAAAGCCGTCGAGCGTGCCAGGAAGAAAAAGAGGA
GGAACCGCCCGGAACGCCGGGCGGCGGCAAAAGCCATCGTTGAATACTTC
GATTTGCTGCCTTTCTCGACGAACGCGCAGTAGCGGCCGCAGCGCGATGG
GAATGGATGCAAATGGCAGCAAGAAAGAGGGAGAAGGGAGGCAGCAAGCG
GCCGACCCACAAAGACAGGAAAACGCCTAGGAACAATCGATTCGACGCTA
CTAACAGCAGTAGCAGACAGCAACCACCGCGGTGGGCATTCGTCTGTCCC
CAACAAAGCTAGGTCTACGGGCGGAGGTCGAGAGCCGGCCAAAAGGGACC
GGCGGAGCAAAGAGACAATGGCGAGAGTGGCCGAAGAATGCAAGCGGAAA
GCCGTCGAGCGTGCCAGGAAGAAAAAGAGGAGGAACCGCCCGGAACGCCG
GGCGGCGGCAAAAGCCATCGTTGAATACTTCGATTTGCTGCCTTTCTCGA
CGAACGCGCAGTAG back to top
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