mRNA_E-siliculosus-1a_M_contig95.17528.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: D7G1X1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X1_ECTSI) HSP 1 Score: 898 bits (2320), Expect = 2.230e-314 Identity = 701/820 (85.49%), Postives = 711/820 (86.71%), Query Frame = 2 Query: 77 MSRKRGRKGGGGGQRWDALPWKTIEPPLERDDGWQGMAGEEQALLYTLEEISGNDYCLREDSLGGSQSVERFFHRRCSCAGSQMVVAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKTTGDGXXXXXXXPEASNKGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXED--GDEAAEVEQEKSERDWELGAEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAXXXXXXXKSADGGEADQXXXXXXXXEGLQEGLQALVLCPTRELALQVAAHLREVVRDTGVSVVEAAAAGAEGGAGAG---AAELPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRGGVKGLGKKGNQHAARLAAEARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSERTAAGNLAGKQRTRSGKQKP 2521 MSRKRGRKG GGGQRWDALPWKTIEPPLERDDGWQGMAGEEQALLYTLEEISGNDYCLREDSLGGSQ ER F C QMVVAPT XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX A+KTT DGXX PEASNKGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ED G+EAAEV Q+KSERDWELG+EEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAA + A+G EADQXXXXXXXXEGL EGLQALVLCPTRELALQVAAHLREVVRDTGV+VVEAAAAG AAELPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCAL+VPATPLHAQMQQRQRLKSLDRFTSDPK+VLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERV MALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGR GVKGLGKKGNQHAARLAA ARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSERTAAG+LAGKQRTRSGKQKP Sbjct: 1 MSRKRGRKGAGGGQRWDALPWKTIEPPLERDDGWQGMAGEEQALLYTLEEISGNDYCLREDSLGGSQ--ERSFLAIILC---QMVVAPTTPSAEDMPPAAQDSAGGVGGGVGNGKEXXXXXXXXXXXXXRKAPSALAAASEGGSSSKTEGGTAXXXXXXXXXXXXXXXXXXXXXXXXNAAVEGGG-AEKTTEDGXXDGE--PEASNKGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARGEDKGGEEAAEVGQKKSERDWELGSEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAA------RLAEGEEADQXXXXXXXXEGLHEGLQALVLCPTRELALQVAAHLREVVRDTGVAVVEAAAAGPAXXXXXXXXXAAELPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALSVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVGMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRRGVKGLGKKGNQHAARLAAGARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSERTAAGDLAGKQRTRSGKQKP 806
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: A0A6H5KFI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI4_9PHAE) HSP 1 Score: 737 bits (1902), Expect = 6.560e-249 Identity = 459/732 (62.70%), Postives = 468/732 (63.93%), Query Frame = 2 Query: 1061 EDGDEAAEVEQEKSERDWELGAEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAXXXXXXXKSADGGEADQXXXXXXXXEGLQEGLQALVLCPTRELALQVAAHLREVVRDTGVSVV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAAAAG---AEGGAGAGAAELPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRGGVKGLGKKGNQHAARLAAEARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSERTAAGNLAGKQRTRSGKQK 2518 EDG EAAEVEQ+KSERDWELGAEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAA XXXXXXX S +GGEADQ EGL EGLQALVLCPTRELALQVAAHLREVVRDTGV+VV +AAAAG +GGAGAGAA+LPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPK+VLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERV MALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGR GVKGLGKKGNQHAARLAAEARQALAVSLS+PLHSDRRKLIPVAQALTDMRAVSERTAAG+LAGKQRT SGKQK Sbjct: 240 EDGKEAAEVEQKKSERDWELGAEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAX-XXXXXXXXSDEGGEADQREGEEKEREGLHEGLQALVLCPTRELALQVAAHLREVVRDTGVAVVAVVGGLAEVKQQRQLSRRPEVVVATPGRFWEMAGTHAHLSRLETLRHLVVDEADRMLERGHYPELSRLFSMLAKAEGRREGGDGGSSSKSRFEEKFPFDVSEGGEWSVPQEEEEEDSGEGGKMFDDAMDEXXXXXXXXXXXXXXXXASRVRSPPAETNRHDGRGFARQTYVFSATLTLGSSGRQQRKKGGAXXXXXKGKGKRGEGDDDAVKNIMDRVGVRGDPAVIDMGRRTVGGGGGAETGQDAAAAGPAVVDGGAGAGAADLPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVGMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRRGVKGLGKKGNQHAARLAAEARQALAVSLSQPLHSDRRKLIPVAQALTDMRAVSERTAAGDLAGKQRTSSGKQK 970
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: A0A836CDB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB6_9STRA) HSP 1 Score: 219 bits (559), Expect = 4.120e-55 Identity = 134/322 (41.61%), Postives = 180/322 (55.90%), Query Frame = 2 Query: 1601 GAAELPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVAMALR---------------------------VLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRGGVKGLGKKGNQHAARLAAEARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSERTAAGNLA 2485 GAA LPALP L L KSLQ +KD YLF +PGRTL+FVNA+ +ARR++ +L L +P PLHAQM QR RL++LD + + ++ATDVAARGLD+P V+HVVHYDA RSA F+HR+GRTARA G +LSI+APRD+A + + +G G+ A P D R++++ARER +A R V + + AQ + A+ L+ +AD+V+D L A A GG G +G H L+ PL SDRRK +PVA+ L + A + RTAAG +A Sbjct: 777 GAAPLPALPEGLTLAQTKSLQADKDAWLYLFATQFPGRTLVFVNAVVMARRVAQVLQLLRIPCAPLHAQMAQRARLRALDFLRTSERCCVIATDVAARGLDVPHVDHVVHYDAPRSAADFVHRSGRTARAGRGGFALSIIAPRDEAAFARVFAAVGYPAGLPALPCDPRLLDKARERALLAARXXXXXXXXXXXXXXXXXXXXXRCLGEAVTRCEAAQGKAGAARTLLSSLAGDADMVVDEAAL---------AIADAEGG----GARGGAHXXXXXXXXXXXXXXXLAEPLFSDRRKFLPVAEKLAEAAAEARRTAAGEVA 1085
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: W7TKC3_9STRA (Atp-dependent rna helicase ddx24 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKC3_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.020e-52 Identity = 128/298 (42.95%), Postives = 171/298 (57.38%), Query Frame = 2 Query: 1619 ALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVL-----------------GLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRGGVKGLGKKGNQHAARLAAEARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSE 2461 ALP+ LKLC +KS+ KD + Y F +PGRT++F N+I RRL+ LL L +PA LHA+MQQR RLKSLD F + ++VLVATDVAARGLDIP VEHV+HYD RS EVF+HRAGRTARA GLS S+VAPRD+ H + C L G GM FP+D++ + RERV +A +++ ++ R A+ +F ++EADL +D +LL E K G + + +R R+ L LS+P+ RRK I VA +L + E Sbjct: 223 ALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE----------------KEHGTEKERQRSRQMEMDRKRLNELLSQPMVQQRRKFINVADSLQALAQTEE 504
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: A0A1W4XTB4_AGRPL (RNA helicase n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XTB4_AGRPL) HSP 1 Score: 202 bits (515), Expect = 4.650e-51 Identity = 156/505 (30.89%), Postives = 220/505 (43.56%), Query Frame = 2 Query: 1127 EEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAXXXXXXXKSADGGEADQXXXXXXXXEGLQEGLQALVLCPTRELALQVAAHLREVVRDTGVSVVEAAAAGAEGGAGA---------------------------GAAELPALPS----------------------------------------------------------------------------------------------------TLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMED 2260 EE M W G++ +L+ L Q F PT IQ LP A+LG+KDI+GAAETGSGKTLAFGLP+LS IL R++ KS+D E + L AL+L PTRELA+QV HL + T + + GG A G + L ++ TL C I EKD + Y F YPGRTLIF N+I +RL++LL L + PLHA MQQRQRLK+LDRF DP+S+L+ATDVAARGLDIP V+HV+HY R++E ++HR+GRTARA G+++ ++ P + ++ + C LG M FP+ ++ ++RV +A V K + + S+ + + + + D+++D DL+ E+ Sbjct: 96 EEVKNMEAWHKFGLQ--ESLIKALADQNFLYPTHIQALTLPSAILGKKDILGAAETGSGKTLAFGLPILSGILKRKE--------LLDHKSSD--EFNP--------------LNALILTPTRELAIQVKNHLTAAAKYTDIKIAVVV-----GGMSAEKQERLLSKNPEIVVATPGRLWELIQLGNSHLSSIDKIRFLAIDETDRMLERGHFQELHDILEKINLMQNEQKNRQNFVFSATLTLEHELPKHLLLKRGRKINKSSSEYKLKKIIELIGMTNPKVVDITDRTGKTVQTLTECRISCSIDEKDYYIYYFLKKYPGRTLIFCNSIGCVKRLNSLLSVLQINVLPLHASMQQRQRLKNLDRFRDDPQSILIATDVAARGLDIPSVDHVLHYQMPRTSESYVHRSGRTARASKDGITVLLIDPSELQSYLRLCRTLGKGEDMPLFPVQQNILAAVKQRVNLAREVEKLELQNRKKSSEKGWLQKAADDMDIILDDDLVKEE 569
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: A0A059LKR6_9CHLO (DEAD/DEAH box helicase (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LKR6_9CHLO) HSP 1 Score: 203 bits (517), Expect = 5.260e-51 Identity = 181/554 (32.67%), Postives = 253/554 (45.67%), Query Frame = 2 Query: 1142 MAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAXXXXXXXKSADGGEADQXXXXXXXXEGLQEGLQALVLCPTRELALQVAAHLREVVRDTGVSVVEAAAA------------------GAEG-------GAGAGAAELPAL-----------------------------PSTLKL------------CSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRGGVKGLGKKGNQHAARLAAEARQALAVSLSRPL---HSDR--------------------RKLIPVAQALTDMRAVSERTA-------AGNLAGKQRTRSGKQ 2515 M W G L +L L GF +PTPIQ V+ AV +D++GAA+TGSGKTLAFGLP++ +L R A +GG A + L+AL++ PTRELALQV HL V R G+ VV G G +G A+ L +L P + L S++ + +DV Y +PGRTL+FVNAIA ARRL+A+L L +P LHA+ QQRQRLK+LDRF ++VLVATDVAARGLDIP V VVHY + + ++HR+GRTARA GL++++V P++ A ++ L FPLD + A+ RV++ALRV + + A + R +++ DL++ D + A AK + + + G+ + A A R LA L++PL +S + RK + +AQ D R SE+ A GN A K+ RS Q Sbjct: 172 MDSWRIYG--LSEPVLSALGALGFEEPTPIQAAVVEAAVRDGRDVLGAAQTGSGKTLAFGLPIIERLLRERRLEA----------REEGGAAPAR----------RRCLKALIVAPTRELALQVQQHLERVARPCGLRVVPVVGGLAIQKQERQLVKRPEIVVGTPGRLWEVMQASGPAASHLCSLGGLRALVIDEADSMVMPGRFVELKSIVDRPLVVDLTPERQVASGVAEASLQCTEESRDVQLYCLLQQHPGRTLVFVNAIAAARRLTAILKILGLPVQALHAEQQQRQRLKALDRFRDSEQAVLVATDVAARGLDIPGVACVVHYQLPATLDSYVHRSGRTARAEKEGLAVAMVMPKEAARYQALLRALNKAEAPPPFPLDPGVYLEAKRRVSLALRVDALERGAAKQHADRAWRRTQARDMDLLLSEDEDYQVALAKVELSER-------PGRTEEERRADQALSLRAQLAQHLAQPLQRRYSGKYLSGGAVAALGEAGSAGELVRKAVHLAQEAVDARRASEKAAEDKLRKKGGNPAQKKPARSRAQ 696
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: A0A4D9D2D9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2D9_9STRA) HSP 1 Score: 201 bits (511), Expect = 2.680e-49 Identity = 126/298 (42.28%), Postives = 171/298 (57.38%), Query Frame = 2 Query: 1619 ALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVL-----------------GLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRGGVKGLGKKGNQHAARLAAEARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSE 2461 ALP+ L+LC +KS+ KD + Y F +PGRT++F N+I RRL+ LL L +PA LHA+MQQR RLKSLD F + ++VLVATDVAARGLDIP VEHV+HYD RS EVF+HRAGRTARA GLS S+VAPRD+ H + C L G G+ FP+D++ + RERV +A +++ ++ R A+ +F ++EADL +D +LL E K G + + +R R+ L LS+P+ RRK I VA +L + E Sbjct: 724 ALPAGLQLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSTSQRPEDPKEASGGSGAGILPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE----------------KEHGTEKERQRSRQMEMDRKRLNELLSQPMGQQRRKFINVADSLQALAQTEE 1005
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: A0A2J7RKC7_9NEOP (RNA helicase n=4 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RKC7_9NEOP) HSP 1 Score: 197 bits (501), Expect = 4.100e-49 Identity = 157/516 (30.43%), Postives = 222/516 (43.02%), Query Frame = 2 Query: 1136 AKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAXXXXXXXKSADGGEADQXXXXXXXXE-------GL------------------QEGLQALVLCPTRELALQVAAHLREVVRDTGVSVVEAAAAGA----EGGAGAGAAELPALPSTL------------KLCSIKSLQM-------------------------------------------------------------------------------------------------------EKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLL 2251 +KM+ W GV + +L L QGF +PT IQ + LP AVLGR+DI+GAAETGSGKTLAFG+P+L IL R +A ++ + + GL Q L ALVL PTRELA+QV HL R TG+ + A E G + A P L ++ +I+ L + EKDV+ Y F +PGRTLIF N+I+ RRL+ LL L PLHA M QRQRLK+LDRF + + +L+ATDVAARGLDIP V+HV+HY R++E ++HR+GRTARA+ GL+L ++ P + ++ + C LG + FP+ ++ A++RV +A + + + A + S +FR E D+++D + L Sbjct: 132 SKMSAWH--GVGIMSPILRALEEQGFVEPTEIQAKTLPAAVLGRRDILGAAETGSGKTLAFGIPILHRILEDRGQSAGRYNLVHAKRTIEAEPCQSENEYEEHEDENSREMVGLGCVQVMKDVSPHNTPGCSQSKLYALVLTPTRELAMQVHKHLTAAARYTGIKIAVVVGGMAPQKQERLLSRGPEIVVATPGRLWELIQDGNPHLAQVSNIRCLAIDETDRMLERGHFQELHNLLELLNVDEGKKRQRQNFVFSATLTMVHEPPRRLKSRNKKLRLTPGQKLQNIMTMLGVTNPKVVDVTKESGTAGTLTEARIVCALEEKDVYLYYFIQQHPGRTLIFCNSISCVRRLAQLLSLLQCRPLPLHANMMQRQRLKNLDRFRDNSRGLLLATDVAARGLDIPGVQHVIHYQVPRTSETYVHRSGRTARAQKEGLTLLLIEPTEVPHYTRLCRTLGRTKDLPLFPISSSLLAAAKQRVTLAQELDRLELATRKSSTETGWFRKALTEMDMLVDDEDL 645
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: N6TJQ3_DENPD (RNA helicase (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6TJQ3_DENPD) HSP 1 Score: 196 bits (497), Expect = 4.400e-49 Identity = 155/484 (32.02%), Postives = 217/484 (44.83%), Query Frame = 2 Query: 1184 LLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAXXXXXXXKSADGGE--ADQXXXXXXXXEGLQEG-----LQALVLCPTRELALQVAAHLREVVRDTGVS---VVEAAAA---------GAEGGAGA----------GAAELPALPS------------------------------------------------------------------------------------------------------TLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDG 2242 LL L QGF PT IQ LP A+LGR+DI+GAAETGSGKTLAFGLP+LS I+ R+A A ++ + D+ L+ L AL+L PTRELA+QV HL +V + TG++ VV AA G E G G L + + TL C I EKD + + F +PGRTLIF N+I +RL+ LL LN PLHA MQQRQRLK+L++FT S+L+ATDVAARGLDIP+++HV+HY R++E ++HR+GRTARA GL++ ++ P + N+ + C LG + FP+ + + +ERV +A ++ K Q + +A + + ++E D+V+DG Sbjct: 90 LLRALQEQGFSYPTEIQAHTLPAALLGRRDILGAAETGSGKTLAFGLPILSGIMRLREAGIADEAADSEYSESEDEDIGVDEHGMGCVNAYKLKSAEVRRPLYALILTPTRELAMQVKNHLTKVAKYTGINIAVVVGGMAAVKQERLLRKGPEIVVGTPGRLWELIQQGNEHLSQIDNIKFLAIDETDRMLEKGHFMELHDLLEKMNLDQQKKSERQNFVFSATLTLIHDIPKHLVLKRKIKGRKLHDMTAEQKVQKIVNTLGITNPKIVDLSQGKGTSGTLSECRITCDIEEKDYYVFYFLKKHPGRTLIFCNSIGCVKRLTNLLGLLNCSPLPLHASMQQRQRLKNLEKFTETENSILIATDVAARGLDIPEIDHVLHYQTPRTSESYVHRSGRTARASVQGLTILLMEPSEFTNYMKMCKTLG-KDNLPPFPVQDKYLSAVKERVNLARQLDKLQLQVRKFNAEEGWLQKAAREMDIVVDG 572
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Match: D0NJ74_PHYIT (DEAD/DEAH box RNA helicase, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0NJ74_PHYIT) HSP 1 Score: 196 bits (499), Expect = 1.310e-48 Identity = 122/263 (46.39%), Postives = 162/263 (61.60%), Query Frame = 2 Query: 1622 LPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKSVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVAMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRGGVKGLGKKGNQHAARLAAEARQALAVSLSRPLHSDRR 2410 LP+ L+LC + + +D Y F YPGRT+IF+NAI R+LS LL LN+P LHA+MQQRQRLK LD F S K +LVATDVAARGLDIP V++VVHY ARS EVF+HR+GRTARA GLS+S+V+P D H Q C +L G+ FP D R +E ER+ +A + + + A ++ + +F+ ++ ADL +D DLL E GAK + + G K K NQ L A+ + LA L RP+ S R+ Sbjct: 467 LPAGLELCQHEVTESTRDSFLYFFLTQYPGRTIIFLNAIHQVRKLSGLLTLLNLPVFALHAEMQQRQRLKKLDGFRSHSKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKMLQRPTGLSDFPFDHRYLEAIDERLRLAKSINEQENAAGKLKSEATWFQQMAAAADLDLDEDLLFE-LGAKQ----RNQDGKKK--KTANQSVQSLRAQLSRLLAAPL-RPVGSARK 721 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17528.1 >prot_E-siliculosus-1a_M_contig95.17528.1 ID=prot_E-siliculosus-1a_M_contig95.17528.1|Name=mRNA_E-siliculosus-1a_M_contig95.17528.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=816bp MSRKRGRKGGGGGQRWDALPWKTIEPPLERDDGWQGMAGEEQALLYTLEEback to top mRNA from alignment at E-siliculosus-1a_M_contig95:546107..557679+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17528.1 ID=mRNA_E-siliculosus-1a_M_contig95.17528.1|Name=mRNA_E-siliculosus-1a_M_contig95.17528.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=11573bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:546107..557679+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:546107..557679+ >mRNA_E-siliculosus-1a_M_contig95.17528.1 ID=mRNA_E-siliculosus-1a_M_contig95.17528.1|Name=mRNA_E-siliculosus-1a_M_contig95.17528.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4896bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:546107..557679+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |